RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 HOXA10P31260 410 aaPredicted RBP21.42■■□□□ 1.02
HERC2-208ENST00000566635 UBE4AQ14139 1066 aa21.42■■□□□ 1.02
HERC2-208ENST00000566635 ZNF512BQ96KM6 892 aaPredicted RBP21.42■■□□□ 1.02
HERC2-208ENST00000566635 BCAMP50895 628 aa21.41■■□□□ 1.02
HERC2-208ENST00000566635 ANKRD2Q9GZV1 360 aa21.41■■□□□ 1.02
HERC2-208ENST00000566635 LRRC37AA6NMS7 1700 aa21.41■■□□□ 1.02
HERC2-208ENST00000566635 HIP1O00291 1037 aa21.41■■□□□ 1.02
HERC2-208ENST00000566635 KLRK1P26718 216 aa21.41■■□□□ 1.02
HERC2-208ENST00000566635 CACNA1SQ13698 1873 aa21.4■■□□□ 1.02
HERC2-208ENST00000566635 MYO5AQ9Y4I1 1855 aaKnown RBP21.4■■□□□ 1.02
HERC2-208ENST00000566635 UQCRFS1P1P0C7P4 283 aa21.4■■□□□ 1.02
HERC2-208ENST00000566635 GYG1P46976 350 aa21.4■■□□□ 1.02
HERC2-208ENST00000566635 KCNJ4P48050 445 aa21.4■■□□□ 1.02
HERC2-208ENST00000566635 RUFY2Q8WXA3 655 aa21.4■■□□□ 1.02
HERC2-208ENST00000566635 MYH7P12883 1935 aa21.39■■□□□ 1.02
HERC2-208ENST00000566635 SRGNP10124 158 aa21.39■■□□□ 1.01
HERC2-208ENST00000566635 RASGRF1Q13972 1273 aa21.39■■□□□ 1.01
HERC2-208ENST00000566635 SLFNL1Q499Z3 407 aa21.39■■□□□ 1.01
HERC2-208ENST00000566635 CRAMP1Q96RY5 1269 aa21.39■■□□□ 1.01
HERC2-208ENST00000566635 HMG20BQ9P0W2 317 aa21.39■■□□□ 1.01
HERC2-208ENST00000566635 PDE6BP35913 854 aa21.38■■□□□ 1.01
HERC2-208ENST00000566635 IPO9Q96P70 1041 aaKnown RBP21.38■■□□□ 1.01
HERC2-208ENST00000566635 KIF2CQ99661 725 aa21.38■■□□□ 1.01
HERC2-208ENST00000566635 MED23Q9ULK4 1368 aa21.38■■□□□ 1.01
HERC2-208ENST00000566635 ZNF804BA4D1E1 1349 aa21.37■■□□□ 1.01
HERC2-208ENST00000566635 CYP2E1P05181 493 aaPredicted RBP21.37■■□□□ 1.01
HERC2-208ENST00000566635 LSG1Q9H089 658 aaKnown RBP21.37■■□□□ 1.01
HERC2-208ENST00000566635 ANKIB1Q9P2G1 1089 aa21.37■■□□□ 1.01
HERC2-208ENST00000566635 IQSEC3Q9UPP2 1182 aaPredicted RBP21.37■■□□□ 1.01
HERC2-208ENST00000566635 COL1A1P02452 1464 aaPredicted RBP21.37■■□□□ 1.01
HERC2-208ENST00000566635 NPR1P16066 1061 aa21.37■■□□□ 1.01
HERC2-208ENST00000566635 ZNF589Q86UQ0 364 aaPredicted RBP21.37■■□□□ 1.01
HERC2-208ENST00000566635 SPATA5Q8NB90 893 aa21.37■■□□□ 1.01
HERC2-208ENST00000566635 UPF1Q92900 1129 aaKnown RBP eCLIP21.37■■□□□ 1.01
HERC2-208ENST00000566635 SEC62Q99442 399 aaKnown RBP21.37■■□□□ 1.01
HERC2-208ENST00000566635 DOCK2Q92608 1830 aa21.37■■□□□ 1.01
HERC2-208ENST00000566635 LTBP1Q14766 1721 aa21.36■■□□□ 1.01
HERC2-208ENST00000566635 RAD50Q92878 1312 aa21.36■■□□□ 1.01
HERC2-208ENST00000566635 PPEF1O14829 653 aaPredicted RBP21.36■■□□□ 1.01
HERC2-208ENST00000566635 GPSM2P81274 684 aa21.36■■□□□ 1.01
HERC2-208ENST00000566635 PIH1D3Q9NQM4 214 aaKnown RBP21.36■■□□□ 1.01
HERC2-208ENST00000566635 XDHP47989 1333 aa21.36■■□□□ 1.01
HERC2-208ENST00000566635 BBOX1O75936 387 aa21.35■■□□□ 1.01
HERC2-208ENST00000566635 DDRGK1Q96HY6 314 aa21.35■■□□□ 1.01
HERC2-208ENST00000566635 FAM84BQ96KN1 310 aaPredicted RBP21.35■■□□□ 1.01
HERC2-208ENST00000566635 MYH13Q9UKX3 1938 aa21.35■■□□□ 1.01
HERC2-208ENST00000566635 IRS2Q9Y4H2 1338 aa21.35■■□□□ 1.01
HERC2-208ENST00000566635 PTH1RQ03431 593 aa21.34■■□□□ 1.01
HERC2-208ENST00000566635 CAVIN4Q5BKX8 364 aa21.34■■□□□ 1.01
HERC2-208ENST00000566635 CCDC129Q6ZRS4 1044 aa21.34■■□□□ 1.01
HERC2-208ENST00000566635 TXNRD3Q86VQ6 643 aa21.34■■□□□ 1.01
HERC2-208ENST00000566635 C2CD5Q86YS7 1000 aa21.34■■□□□ 1.01
HERC2-208ENST00000566635 GPR101Q96P66 508 aaPredicted RBP21.34■■□□□ 1.01
HERC2-208ENST00000566635 KIAA1211Q6ZU35 1233 aa21.34■■□□□ 1.01
HERC2-208ENST00000566635 MASTLQ96GX5 879 aa21.34■■□□□ 1.01
HERC2-208ENST00000566635 RNF113AO15541 343 aaKnown RBP21.33■■□□□ 1.01
HERC2-208ENST00000566635 VPS37DQ86XT2 251 aa21.33■■□□□ 1.01
HERC2-208ENST00000566635 SLC16A10Q8TF71 515 aa21.33■■□□□ 1.01
HERC2-208ENST00000566635 PALD1Q9ULE6 856 aa21.33■■□□□ 1.01
HERC2-208ENST00000566635 NSFL1CQ9UNZ2 370 aaKnown RBP21.33■■□□□ 1.01
HERC2-208ENST00000566635 C10orf71Q711Q0 1435 aa21.33■■□□□ 1
HERC2-208ENST00000566635 CCDC171Q6TFL3 1326 aa21.33■■□□□ 1
HERC2-208ENST00000566635 CHRNA5P30532 468 aa21.32■■□□□ 1
HERC2-208ENST00000566635 FBXO33Q7Z6M2 555 aa21.32■■□□□ 1
HERC2-208ENST00000566635 LEMD3Q9Y2U8 911 aa21.32■■□□□ 1
HERC2-208ENST00000566635 ZBTB7AO95365 584 aa21.32■■□□□ 1
HERC2-208ENST00000566635 TTF1Q15361 905 aaPredicted RBP21.32■■□□□ 1
HERC2-208ENST00000566635 ZMYM1Q5SVZ6 1142 aa21.32■■□□□ 1
HERC2-208ENST00000566635 OLFM4Q6UX06 510 aa21.32■■□□□ 1
HERC2-208ENST00000566635 ZNF622Q969S3 477 aaKnown RBP eCLIP21.32■■□□□ 1
HERC2-208ENST00000566635 UFL1O94874 794 aa21.31■■□□□ 1
HERC2-208ENST00000566635 GNL3LQ9NVN8 582 aaKnown RBP21.31■■□□□ 1
HERC2-208ENST00000566635 IDH1O75874 414 aaKnown RBP21.31■■□□□ 1
HERC2-208ENST00000566635 MCMDC2Q4G0Z9 681 aa21.31■■□□□ 1
HERC2-208ENST00000566635 TMC4Q7Z404 712 aa21.31■■□□□ 1
HERC2-208ENST00000566635 ATP6V0A2Q9Y487 856 aa21.31■■□□□ 1
HERC2-208ENST00000566635 MAST3O60307 1309 aa21.3■■□□□ 1
HERC2-208ENST00000566635 DUOX1Q9NRD9 1551 aa21.3■■□□□ 1
HERC2-208ENST00000566635 H0YIN7 160 aa21.3■■□□□ 1
HERC2-208ENST00000566635 M0R2C6 588 aa21.3■■□□□ 1
HERC2-208ENST00000566635 EPB41L2O43491 1005 aaKnown RBP21.3■■□□□ 1
HERC2-208ENST00000566635 HIBADHP31937 336 aaKnown RBP21.3■■□□□ 1
HERC2-208ENST00000566635 TICAM2Q86XR7 235 aa21.3■■□□□ 1
HERC2-208ENST00000566635 SP8Q8IXZ3 490 aa21.3■■□□□ 1
HERC2-208ENST00000566635 WWC3Q9ULE0 1092 aa21.3■■□□□ 1
HERC2-208ENST00000566635 MCCP23508 829 aa21.29■■□□□ 1
HERC2-208ENST00000566635 ALDH1B1P30837 517 aa21.29■■□□□ 1
HERC2-208ENST00000566635 SLC4A3P48751 1232 aa21.29■■□□□ 1
HERC2-208ENST00000566635 R3HDM1Q15032 1099 aaKnown RBP21.29■■□□□ 1
HERC2-208ENST00000566635 HELLSQ9NRZ9 838 aa21.29■■□□□ 1
HERC2-208ENST00000566635 GGA1Q9UJY5 639 aa21.29■■□□□ 1
HERC2-208ENST00000566635 DLEC1Q9Y238 1755 aa21.29■■□□□ 1
HERC2-208ENST00000566635 SLX4Q8IY92 1834 aa21.29■■□□□ 1
HERC2-208ENST00000566635 HSPA4P34932 840 aa21.29■■□□□ 1
HERC2-208ENST00000566635 OSBP2Q969R2 916 aa21.29■■□□□ 1
HERC2-208ENST00000566635 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.29■■□□□ 17e-7■■■■■ 43.1
HERC2-208ENST00000566635 PODXL2Q9NZ53 605 aa21.29■■□□□ 1
HERC2-208ENST00000566635 ZFYP08048 801 aaPredicted RBP21.28■■□□□ 1
HERC2-208ENST00000566635 ATP2B4P23634 1241 aa21.28■■□□□ 1
HERC2-208ENST00000566635 LRRFIP1Q32MZ4 808 aaKnown RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms