RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 VPS53Q5VIR6 699 aa13.67□□□□□ -0.22
LINC00562-201ENST00000566385 IL17RAQ96F46 866 aa13.67□□□□□ -0.22
LINC00562-201ENST00000566385 CARMIL3Q8ND23 1372 aa13.67□□□□□ -0.22
LINC00562-201ENST00000566385 ST18O60284 1047 aa13.66□□□□□ -0.22
LINC00562-201ENST00000566385 MCMDC2Q4G0Z9 681 aa13.66□□□□□ -0.22
LINC00562-201ENST00000566385 BSDC1Q9NW68 430 aaPredicted RBP13.66□□□□□ -0.22
LINC00562-201ENST00000566385 TFCP2L1Q9NZI6 479 aa13.66□□□□□ -0.22
LINC00562-201ENST00000566385 MINPP1Q9UNW1 487 aa13.66□□□□□ -0.22
LINC00562-201ENST00000566385 DDIT3P35638 169 aa13.66□□□□□ -0.22
LINC00562-201ENST00000566385 PRR5LQ6MZQ0 368 aa13.66□□□□□ -0.22
LINC00562-201ENST00000566385 OSBP2Q969R2 916 aa13.66□□□□□ -0.22
LINC00562-201ENST00000566385 LARP6Q9BRS8 491 aaKnown RBP13.66□□□□□ -0.22
LINC00562-201ENST00000566385 A0A1B0GUL6 1792 aa13.65□□□□□ -0.22
LINC00562-201ENST00000566385 ARAP2Q8WZ64 1704 aa13.65□□□□□ -0.22
LINC00562-201ENST00000566385 KCNJ4P48050 445 aa13.65□□□□□ -0.22
LINC00562-201ENST00000566385 RPS8P62241 208 aaKnown RBP13.65□□□□□ -0.22
LINC00562-201ENST00000566385 ZMYM1Q5SVZ6 1142 aa13.65□□□□□ -0.22
LINC00562-201ENST00000566385 CREB3L3Q68CJ9 461 aa13.65□□□□□ -0.22
LINC00562-201ENST00000566385 CNBD1Q8NA66 436 aa13.65□□□□□ -0.22
LINC00562-201ENST00000566385 HMG20BQ9P0W2 317 aa13.65□□□□□ -0.22
LINC00562-201ENST00000566385 IQSEC3Q9UPP2 1182 aaPredicted RBP13.65□□□□□ -0.22
LINC00562-201ENST00000566385 RFX7Q2KHR2 1363 aa13.65□□□□□ -0.22
LINC00562-201ENST00000566385 RNF113AO15541 343 aaKnown RBP13.65□□□□□ -0.22
LINC00562-201ENST00000566385 SLC5A1P13866 664 aa13.65□□□□□ -0.22
LINC00562-201ENST00000566385 ARID4AP29374 1257 aaPredicted RBP13.65□□□□□ -0.22
LINC00562-201ENST00000566385 DDR1Q08345 913 aa13.65□□□□□ -0.22
LINC00562-201ENST00000566385 RASGRF1Q13972 1273 aa13.65□□□□□ -0.22
LINC00562-201ENST00000566385 PIH1D3Q9NQM4 214 aaKnown RBP13.65□□□□□ -0.22
LINC00562-201ENST00000566385 MAST3O60307 1309 aa13.64□□□□□ -0.23
LINC00562-201ENST00000566385 M0R2C6 588 aa13.64□□□□□ -0.23
LINC00562-201ENST00000566385 SLC27A2O14975 620 aa13.64□□□□□ -0.23
LINC00562-201ENST00000566385 SERPINB2P05120 415 aa13.64□□□□□ -0.23
LINC00562-201ENST00000566385 HSP90AA1P07900 732 aaKnown RBP13.64□□□□□ -0.23
LINC00562-201ENST00000566385 NFKBIBQ15653 356 aa13.64□□□□□ -0.23
LINC00562-201ENST00000566385 COL23A1Q86Y22 540 aaPredicted RBP13.64□□□□□ -0.23
LINC00562-201ENST00000566385 AKT1S1Q96B36 256 aa13.64□□□□□ -0.23
LINC00562-201ENST00000566385 ZNF512BQ96KM6 892 aaPredicted RBP13.64□□□□□ -0.23
LINC00562-201ENST00000566385 A0A0G2JLW4 131 aa13.64□□□□□ -0.23
LINC00562-201ENST00000566385 CASTP20810 708 aaKnown RBP13.64□□□□□ -0.23
LINC00562-201ENST00000566385 KLRK1P26718 216 aa13.64□□□□□ -0.23
LINC00562-201ENST00000566385 GYG1P46976 350 aa13.64□□□□□ -0.23
LINC00562-201ENST00000566385 KCNB2Q92953 911 aa13.64□□□□□ -0.23
LINC00562-201ENST00000566385 PUS7LQ9H0K6 701 aaKnown RBP13.64□□□□□ -0.23
LINC00562-201ENST00000566385 FRAT2O75474 233 aaPredicted RBP13.63□□□□□ -0.23
LINC00562-201ENST00000566385 ZGPATQ8N5A5 531 aaKnown RBP13.63□□□□□ -0.23
LINC00562-201ENST00000566385 TNS1Q9HBL0 1735 aaKnown RBP13.63□□□□□ -0.23
LINC00562-201ENST00000566385 SPATA5Q8NB90 893 aa13.63□□□□□ -0.23
LINC00562-201ENST00000566385 TMX3Q96JJ7 454 aa13.63□□□□□ -0.23
LINC00562-201ENST00000566385 JAKMIP1Q96N16 626 aaKnown RBP13.63□□□□□ -0.23
LINC00562-201ENST00000566385 HELLSQ9NRZ9 838 aa13.63□□□□□ -0.23
LINC00562-201ENST00000566385 MYH7P12883 1935 aa13.62□□□□□ -0.23
LINC00562-201ENST00000566385 IDH1O75874 414 aaKnown RBP13.62□□□□□ -0.23
LINC00562-201ENST00000566385 WASHC4Q2M389 1173 aa13.62□□□□□ -0.23
LINC00562-201ENST00000566385 TTC14Q96N46 770 aa13.62□□□□□ -0.23
LINC00562-201ENST00000566385 POLRMTO00411 1230 aaKnown RBP13.62□□□□□ -0.23
LINC00562-201ENST00000566385 FOXP2O15409 715 aa13.62□□□□□ -0.23
LINC00562-201ENST00000566385 SLC9C2Q5TAH2 1124 aa13.62□□□□□ -0.23
LINC00562-201ENST00000566385 FBXO41Q8TF61 875 aa13.62□□□□□ -0.23
LINC00562-201ENST00000566385 WWC3Q9ULE0 1092 aa13.62□□□□□ -0.23
LINC00562-201ENST00000566385 CYP21A2P08686 494 aa13.61□□□□□ -0.23
LINC00562-201ENST00000566385 HSPD1P10809 573 aaKnown RBP13.61□□□□□ -0.23
LINC00562-201ENST00000566385 TCEANC2Q96MN5 208 aa13.61□□□□□ -0.23
LINC00562-201ENST00000566385 UQCRFS1P1P0C7P4 283 aa13.61□□□□□ -0.23
LINC00562-201ENST00000566385 AK2P54819 239 aa13.61□□□□□ -0.23
LINC00562-201ENST00000566385 TXNRD3Q86VQ6 643 aa13.61□□□□□ -0.23
LINC00562-201ENST00000566385 DTNBO60941 627 aa13.6□□□□□ -0.23
LINC00562-201ENST00000566385 ZKSCAN1P17029 563 aaPredicted RBP13.6□□□□□ -0.23
LINC00562-201ENST00000566385 EN1Q05925 392 aaPredicted RBP13.6□□□□□ -0.23
LINC00562-201ENST00000566385 UBE4AQ14139 1066 aa13.6□□□□□ -0.23
LINC00562-201ENST00000566385 EZH2Q15910 746 aaKnown RBP13.6□□□□□ -0.23
LINC00562-201ENST00000566385 ZSWIM6Q9HCJ5 1215 aa13.6□□□□□ -0.23
LINC00562-201ENST00000566385 CHMP5Q9NZZ3 219 aa13.6□□□□□ -0.23
LINC00562-201ENST00000566385 UTRNP46939 3433 aa13.6□□□□□ -0.23
LINC00562-201ENST00000566385 ADD2P35612 726 aa13.59□□□□□ -0.23
LINC00562-201ENST00000566385 TTLL5Q6EMB2 1281 aa13.59□□□□□ -0.23
LINC00562-201ENST00000566385 RUFY3Q7L099 469 aa13.59□□□□□ -0.23
LINC00562-201ENST00000566385 FAM84BQ96KN1 310 aaPredicted RBP13.59□□□□□ -0.23
LINC00562-201ENST00000566385 RPAP1Q9BWH6 1393 aaPredicted RBP13.59□□□□□ -0.23
LINC00562-201ENST00000566385 PKP1Q13835 747 aa13.59□□□□□ -0.23
LINC00562-201ENST00000566385 APPBP2Q92624 585 aa13.59□□□□□ -0.23
LINC00562-201ENST00000566385 ANO8Q9HCE9 1232 aaPredicted RBP13.59□□□□□ -0.23
LINC00562-201ENST00000566385 ZNF532Q9HCE3 1301 aa13.59□□□□□ -0.23
LINC00562-201ENST00000566385 COL1A1P02452 1464 aaPredicted RBP13.59□□□□□ -0.23
LINC00562-201ENST00000566385 MSL1Q68DK7 614 aa13.58□□□□□ -0.23
LINC00562-201ENST00000566385 ZNF804BA4D1E1 1349 aa13.58□□□□□ -0.24
LINC00562-201ENST00000566385 PNPLA7Q6ZV29 1317 aa13.58□□□□□ -0.24
LINC00562-201ENST00000566385 TCRBV5S4A2TA0A5A2 114 aa13.58□□□□□ -0.24
LINC00562-201ENST00000566385 LARGE1O95461 756 aa13.58□□□□□ -0.24
LINC00562-201ENST00000566385 ZFYP08048 801 aaPredicted RBP13.58□□□□□ -0.24
LINC00562-201ENST00000566385 PDE6AP16499 860 aa13.58□□□□□ -0.24
LINC00562-201ENST00000566385 GRAPQ13588 217 aa13.58□□□□□ -0.24
LINC00562-201ENST00000566385 TTF1Q15361 905 aaPredicted RBP13.58□□□□□ -0.24
LINC00562-201ENST00000566385 CRY2Q49AN0 593 aa13.58□□□□□ -0.24
LINC00562-201ENST00000566385 STOX1Q6ZVD7 989 aa13.58□□□□□ -0.24
LINC00562-201ENST00000566385 GRAPLQ8TC17 118 aaPredicted RBP13.58□□□□□ -0.24
LINC00562-201ENST00000566385 GPAA1O43292 621 aa13.57□□□□□ -0.24
LINC00562-201ENST00000566385 ST5P78524 1137 aa13.57□□□□□ -0.24
LINC00562-201ENST00000566385 RNF20Q5VTR2 975 aa13.57□□□□□ -0.24
LINC00562-201ENST00000566385 TICAM2Q86XR7 235 aa13.57□□□□□ -0.24
LINC00562-201ENST00000566385 DSCC1Q9BVC3 393 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms