RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 SYCP2Q9BX26 1530 aa3.35□□□□□ -1.87
CHD9-218ENST00000566029 MYO5CQ9NQX4 1742 aa3.35□□□□□ -1.87
CHD9-218ENST00000566029 CCDC151A5D8V7 595 aa3.35□□□□□ -1.87
CHD9-218ENST00000566029 SPOCK3Q9BQ16 436 aa3.35□□□□□ -1.87
CHD9-218ENST00000566029 HSPA4P34932 840 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 AARSP49588 968 aaKnown RBP eCLIP3.34□□□□□ -1.872e-6■■■■■ 61.6
CHD9-218ENST00000566029 VPS53Q5VIR6 699 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 ZNF330Q9Y3S2 320 aaPredicted RBP3.34□□□□□ -1.87
CHD9-218ENST00000566029 ZC3H4Q9UPT8 1303 aaKnown RBP3.34□□□□□ -1.87
CHD9-218ENST00000566029 ARAP3Q8WWN8 1544 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 CHUKO15111 745 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 FSBPO95073 299 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 DNM1Q05193 864 aaKnown RBP3.34□□□□□ -1.87
CHD9-218ENST00000566029 DDR1Q08345 913 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 ASXL2Q76L83 1435 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 ERLIN1O75477 346 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 ADCY2Q08462 1091 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 CDCA2Q69YH5 1023 aaPredicted RBP3.34□□□□□ -1.87
CHD9-218ENST00000566029 FAM173BQ6P4H8 233 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 VEZTQ9HBM0 779 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 IMPACTQ9P2X3 320 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 RCOR1Q9UKL0 485 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 ADGRB1O14514 1584 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 VIRMAQ69YN4 1812 aaKnown RBP3.34□□□□□ -1.87
CHD9-218ENST00000566029 VPS37CA5D8V6 355 aaPredicted RBP3.34□□□□□ -1.87
CHD9-218ENST00000566029 KRT24Q2M2I5 525 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 FILIP1LQ4L180 1135 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 MIEF2Q96C03 454 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 CASZ1Q86V15 1759 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 CNGA1P29973 690 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 LIG3P49916 1009 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 RBBP5Q15291 538 aaKnown RBP3.34□□□□□ -1.87
CHD9-218ENST00000566029 CEP85Q6P2H3 762 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 ALDH8A1Q9H2A2 487 aaPredicted RBP3.34□□□□□ -1.87
CHD9-218ENST00000566029 USH1CQ9Y6N9 552 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 SEPT7Q16181 437 aaKnown RBP3.34□□□□□ -1.87
CHD9-218ENST00000566029 THUMPD2Q9BTF0 503 aaKnown RBP3.34□□□□□ -1.87
CHD9-218ENST00000566029 TM6SF1Q9BZW5 370 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 VWA3AA6NCI4 1184 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 CEP57L1Q8IYX8 460 aa3.34□□□□□ -1.87
CHD9-218ENST00000566029 TEX13AQ9BXU3 409 aaPredicted RBP3.34□□□□□ -1.87
CHD9-218ENST00000566029 TRMT1Q9NXH9 659 aaKnown RBP3.34□□□□□ -1.87
CHD9-218ENST00000566029 IQGAP2Q13576 1575 aa3.34□□□□□ -1.88
CHD9-218ENST00000566029 SRRM3A6NNA2 597 aaPredicted RBP3.34□□□□□ -1.88
CHD9-218ENST00000566029 AOPEPQ8N6M6 819 aa3.34□□□□□ -1.88
CHD9-218ENST00000566029 FAM210AQ96ND0 272 aa3.34□□□□□ -1.88
CHD9-218ENST00000566029 PNKPQ96T60 521 aa3.34□□□□□ -1.88
CHD9-218ENST00000566029 EIF4EBP3O60516 100 aaPredicted RBP3.34□□□□□ -1.88
CHD9-218ENST00000566029 GIGYF1O75420 1035 aaPredicted RBP3.34□□□□□ -1.88
CHD9-218ENST00000566029 EIF3JO75822 258 aaKnown RBP3.34□□□□□ -1.88
CHD9-218ENST00000566029 PAX7P23759 505 aa3.34□□□□□ -1.88
CHD9-218ENST00000566029 STK3Q13188 491 aa3.34□□□□□ -1.88
CHD9-218ENST00000566029 LEKR1Q6ZMV7 388 aa3.34□□□□□ -1.88
CHD9-218ENST00000566029 CEP63Q96MT8 703 aa3.34□□□□□ -1.88
CHD9-218ENST00000566029 BIN2Q9UBW5 565 aaPredicted RBP3.34□□□□□ -1.88
CHD9-218ENST00000566029 USP16Q9Y5T5 823 aa3.34□□□□□ -1.88
CHD9-218ENST00000566029 SOS1Q07889 1333 aaPredicted RBP3.34□□□□□ -1.88
CHD9-218ENST00000566029 ZSCAN12O43309 604 aa3.34□□□□□ -1.88
CHD9-218ENST00000566029 GJB2P29033 226 aa3.34□□□□□ -1.88
CHD9-218ENST00000566029 INF2Q27J81 1249 aa3.34□□□□□ -1.88
CHD9-218ENST00000566029 ARFGAP3Q9NP61 516 aa3.34□□□□□ -1.88
CHD9-218ENST00000566029 ENGASEQ8NFI3 743 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 DPF2Q92785 391 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 ABCA6Q8N139 1617 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 ABCC3O15438 1527 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 STX1AQ16623 288 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 TSPYL6Q8N831 410 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 CLIC6Q96NY7 704 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 ZHX3Q9H4I2 956 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 BAG1Q99933 345 aaPredicted RBP3.33□□□□□ -1.88
CHD9-218ENST00000566029 DESP17661 470 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 MAP3K9P80192 1104 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 TRAF1Q13077 416 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 GBP3Q9H0R5 595 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 VIPAS39Q9H9C1 493 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 CLTCL1P53675 1640 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 TTC37Q6PGP7 1564 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 NEBLO76041 1014 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 TBC1D8BQ0IIM8 1120 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 NFE2L2Q16236 605 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 CFAP70Q5T0N1 1121 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 RCSD1Q6JBY9 416 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 ANKZF1Q9H8Y5 726 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 ABCB6Q9NP58 842 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 SH2B1Q9NRF2 756 aaPredicted RBP3.33□□□□□ -1.88
CHD9-218ENST00000566029 ANO10Q9NW15 660 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 ARHGEF5Q12774 1597 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 SKOR1P84550 965 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 PPP2R3AQ06190 1150 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 TEX11Q8IYF3 940 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 MAB21L3Q8N8X9 362 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 CNNM3Q8NE01 707 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 MAGEC3Q8TD91 643 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 EPS8L1Q8TE68 723 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 RMDN2Q96LZ7 410 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 URI1O94763 535 aaPredicted RBP3.33□□□□□ -1.88
CHD9-218ENST00000566029 FERMT3Q86UX7 667 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 VSTM4Q8IW00 320 aa3.33□□□□□ -1.88
CHD9-218ENST00000566029 TRIM6Q9C030 488 aaPredicted RBP3.33□□□□□ -1.88
CHD9-218ENST00000566029 WWC3Q9ULE0 1092 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms