RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 KCNB2Q92953 911 aa23.52■■□□□ 1.36
CLN6-205ENST00000564846 UBE4AQ14139 1066 aa23.52■■□□□ 1.36
CLN6-205ENST00000564846 NECTIN1Q15223 517 aa23.52■■□□□ 1.36
CLN6-205ENST00000564846 SNX14Q9Y5W7 946 aa23.52■■□□□ 1.36
CLN6-205ENST00000564846 KCNJ4P48050 445 aa23.51■■□□□ 1.35
CLN6-205ENST00000564846 NEK4P51957 841 aa23.51■■□□□ 1.35
CLN6-205ENST00000564846 NLGN1Q8N2Q7 840 aa23.51■■□□□ 1.35
CLN6-205ENST00000564846 RBM8AQ9Y5S9 174 aaKnown RBP23.51■■□□□ 1.35
CLN6-205ENST00000564846 MCM2P49736 904 aa23.5■■□□□ 1.35
CLN6-205ENST00000564846 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.5■■□□□ 1.35
CLN6-205ENST00000564846 ANKRD2Q9GZV1 360 aa23.5■■□□□ 1.35
CLN6-205ENST00000564846 TNRC6CQ9HCJ0 1690 aaKnown RBP23.5■■□□□ 1.35
CLN6-205ENST00000564846 SNAP23O00161 211 aa23.5■■□□□ 1.35
CLN6-205ENST00000564846 ZKSCAN1P17029 563 aaPredicted RBP23.5■■□□□ 1.35
CLN6-205ENST00000564846 PI16Q6UXB8 463 aa23.5■■□□□ 1.35
CLN6-205ENST00000564846 SLKQ9H2G2 1235 aaPredicted RBP23.5■■□□□ 1.35
CLN6-205ENST00000564846 POLRMTO00411 1230 aaKnown RBP23.49■■□□□ 1.35
CLN6-205ENST00000564846 RNF20Q5VTR2 975 aa23.49■■□□□ 1.35
CLN6-205ENST00000564846 ZSCAN25Q6NSZ9 544 aa23.49■■□□□ 1.35
CLN6-205ENST00000564846 PRPF40BQ6NWY9 871 aaKnown RBP23.49■■□□□ 1.35
CLN6-205ENST00000564846 COL23A1Q86Y22 540 aaPredicted RBP23.49■■□□□ 1.35
CLN6-205ENST00000564846 CHGBP05060 677 aa23.48■■□□□ 1.35
CLN6-205ENST00000564846 CYP2E1P05181 493 aaPredicted RBP23.48■■□□□ 1.35
CLN6-205ENST00000564846 DDR1Q08345 913 aa23.48■■□□□ 1.35
CLN6-205ENST00000564846 RASEFQ8IZ41 740 aa23.48■■□□□ 1.35
CLN6-205ENST00000564846 SPATA5Q8NB90 893 aa23.48■■□□□ 1.35
CLN6-205ENST00000564846 SEC62Q99442 399 aaKnown RBP23.48■■□□□ 1.35
CLN6-205ENST00000564846 HMG20BQ9P0W2 317 aa23.48■■□□□ 1.35
CLN6-205ENST00000564846 AKAP11Q9UKA4 1901 aa23.48■■□□□ 1.35
CLN6-205ENST00000564846 GRAPQ13588 217 aa23.47■■□□□ 1.35
CLN6-205ENST00000564846 CRY2Q49AN0 593 aa23.47■■□□□ 1.35
CLN6-205ENST00000564846 CREB3L3Q68CJ9 461 aa23.47■■□□□ 1.35
CLN6-205ENST00000564846 GRAPLQ8TC17 118 aaPredicted RBP23.47■■□□□ 1.35
CLN6-205ENST00000564846 RASGRF1Q13972 1273 aa23.47■■□□□ 1.35
CLN6-205ENST00000564846 SPRYD3Q8NCJ5 442 aa23.47■■□□□ 1.35
CLN6-205ENST00000564846 U3KPZ7 1027 aaPredicted RBP23.47■■□□□ 1.35
CLN6-205ENST00000564846 TAF1P21675 1872 aa23.46■■□□□ 1.35
CLN6-205ENST00000564846 HSP90AA1P07900 732 aaKnown RBP23.46■■□□□ 1.35
CLN6-205ENST00000564846 BCAMP50895 628 aa23.46■■□□□ 1.35
CLN6-205ENST00000564846 TM6SF1Q9BZW5 370 aa23.46■■□□□ 1.35
CLN6-205ENST00000564846 A0A1B0GUL6 1792 aa23.46■■□□□ 1.35
CLN6-205ENST00000564846 CCDC129Q6ZRS4 1044 aa23.45■■□□□ 1.34
CLN6-205ENST00000564846 APPBP2Q92624 585 aa23.45■■□□□ 1.34
CLN6-205ENST00000564846 RPGRQ92834 1020 aaKnown RBP23.45■■□□□ 1.34
CLN6-205ENST00000564846 GNL3LQ9NVN8 582 aaKnown RBP23.45■■□□□ 1.34
CLN6-205ENST00000564846 ZNF804BA4D1E1 1349 aa23.45■■□□□ 1.34
CLN6-205ENST00000564846 MAST3O60307 1309 aa23.45■■□□□ 1.34
CLN6-205ENST00000564846 SLC27A2O14975 620 aa23.45■■□□□ 1.34
CLN6-205ENST00000564846 CAVIN4Q5BKX8 364 aa23.45■■□□□ 1.34
CLN6-205ENST00000564846 DSCC1Q9BVC3 393 aa23.45■■□□□ 1.34
CLN6-205ENST00000564846 UPF3BQ9BZI7 483 aaKnown RBP23.45■■□□□ 1.34
CLN6-205ENST00000564846 PNPLA7Q6ZV29 1317 aa23.44■■□□□ 1.34
CLN6-205ENST00000564846 WASHC4Q2M389 1173 aa23.44■■□□□ 1.34
CLN6-205ENST00000564846 PIH1D3Q9NQM4 214 aaKnown RBP23.44■■□□□ 1.34
CLN6-205ENST00000564846 ADD2P35612 726 aa23.43■■□□□ 1.34
CLN6-205ENST00000564846 TSGA10IPQ3SY00 556 aa23.43■■□□□ 1.34
CLN6-205ENST00000564846 SLFNL1Q499Z3 407 aa23.43■■□□□ 1.34
CLN6-205ENST00000564846 OSBP2Q969R2 916 aa23.43■■□□□ 1.34
CLN6-205ENST00000564846 CAMKK2Q96RR4 588 aa23.43■■□□□ 1.34
CLN6-205ENST00000564846 ANP32EQ9BTT0 268 aa23.43■■□□□ 1.34
CLN6-205ENST00000564846 UBE3CQ15386 1083 aa23.42■■□□□ 1.34
CLN6-205ENST00000564846 RBM17Q96I25 401 aaKnown RBP23.42■■□□□ 1.34
CLN6-205ENST00000564846 KLRG2A4D1S0 409 aaPredicted RBP23.42■■□□□ 1.34
CLN6-205ENST00000564846 M0R2C6 588 aa23.42■■□□□ 1.34
CLN6-205ENST00000564846 IDH1O75874 414 aaKnown RBP23.42■■□□□ 1.34
CLN6-205ENST00000564846 PSMA5P28066 241 aa23.42■■□□□ 1.34
CLN6-205ENST00000564846 SLC9C2Q5TAH2 1124 aa23.42■■□□□ 1.34
CLN6-205ENST00000564846 CHMP5Q9NZZ3 219 aa23.42■■□□□ 1.34
CLN6-205ENST00000564846 HOXA10P31260 410 aaPredicted RBP23.41■■□□□ 1.34
CLN6-205ENST00000564846 JAKMIP1Q96N16 626 aaKnown RBP23.41■■□□□ 1.34
CLN6-205ENST00000564846 ZSWIM6Q9HCJ5 1215 aa23.41■■□□□ 1.34
CLN6-205ENST00000564846 CASTP20810 708 aaKnown RBP23.4■■□□□ 1.34
CLN6-205ENST00000564846 DDIT3P35638 169 aa23.4■■□□□ 1.34
CLN6-205ENST00000564846 GYG1P46976 350 aa23.4■■□□□ 1.34
CLN6-205ENST00000564846 MAP3K12Q12852 859 aa23.4■■□□□ 1.34
CLN6-205ENST00000564846 KRT32Q14532 448 aa23.4■■□□□ 1.34
CLN6-205ENST00000564846 EZH2Q15910 746 aaKnown RBP23.4■■□□□ 1.34
CLN6-205ENST00000564846 VPS37DQ86XT2 251 aa23.4■■□□□ 1.34
CLN6-205ENST00000564846 SEMA3EO15041 775 aa23.4■■□□□ 1.34
CLN6-205ENST00000564846 HSPD1P10809 573 aaKnown RBP23.4■■□□□ 1.34
CLN6-205ENST00000564846 EN1Q05925 392 aaPredicted RBP23.4■■□□□ 1.34
CLN6-205ENST00000564846 ADCK5Q3MIX3 580 aa23.4■■□□□ 1.34
CLN6-205ENST00000564846 FAM84BQ96KN1 310 aaPredicted RBP23.4■■□□□ 1.34
CLN6-205ENST00000564846 TTC14Q96N46 770 aa23.4■■□□□ 1.34
CLN6-205ENST00000564846 BRIP1Q9BX63 1249 aa23.4■■□□□ 1.34
CLN6-205ENST00000564846 CIZ1Q9ULV3 898 aaPredicted RBP23.4■■□□□ 1.34
CLN6-205ENST00000564846 RPAP1Q9BWH6 1393 aaPredicted RBP23.39■■□□□ 1.34
CLN6-205ENST00000564846 FBXO33Q7Z6M2 555 aa23.39■■□□□ 1.33
CLN6-205ENST00000564846 LEMD3Q9Y2U8 911 aa23.39■■□□□ 1.33
CLN6-205ENST00000564846 CYP46A1Q9Y6A2 500 aa23.39■■□□□ 1.33
CLN6-205ENST00000564846 BBOX1O75936 387 aa23.38■■□□□ 1.33
CLN6-205ENST00000564846 PDE6AP16499 860 aa23.38■■□□□ 1.33
CLN6-205ENST00000564846 SLC15A2Q16348 729 aa23.38■■□□□ 1.33
CLN6-205ENST00000564846 VPS53Q5VIR6 699 aa23.38■■□□□ 1.33
CLN6-205ENST00000564846 TMX3Q96JJ7 454 aa23.38■■□□□ 1.33
CLN6-205ENST00000564846 CRAMP1Q96RY5 1269 aa23.38■■□□□ 1.33
CLN6-205ENST00000564846 PUS7LQ9H0K6 701 aaKnown RBP23.38■■□□□ 1.33
CLN6-205ENST00000564846 MYH7P12883 1935 aa23.38■■□□□ 1.33
CLN6-205ENST00000564846 WTIPA6NIX2 430 aaPredicted RBP23.37■■□□□ 1.33
CLN6-205ENST00000564846 ZBTB22O15209 634 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms