RNA–Protein interactions for RNA: ENST00000564534.1

LINC01858-201, Transcript of long intergenic non-protein coding RNA 1858, humanhuman

TSL 1 (best) BASIC

Gene LINC01858, Length 1,838 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01858-201ENST00000564534 ATP8B2P98198 1209 aa11.19□□□□□ -0.62
LINC01858-201ENST00000564534 TAF7LQ5H9L4 462 aa11.19□□□□□ -0.62
LINC01858-201ENST00000564534 C2CD5Q86YS7 1000 aa11.19□□□□□ -0.62
LINC01858-201ENST00000564534 RBM17Q96I25 401 aaKnown RBP11.19□□□□□ -0.62
LINC01858-201ENST00000564534 KRTAP3-3Q9BYR6 98 aa11.19□□□□□ -0.62
LINC01858-201ENST00000564534 KRTAP3-2Q9BYR7 98 aa11.19□□□□□ -0.62
LINC01858-201ENST00000564534 GREM2Q9H772 168 aa11.19□□□□□ -0.62
LINC01858-201ENST00000564534 KIF13BQ9NQT8 1826 aa11.19□□□□□ -0.62
LINC01858-201ENST00000564534 NPR1P16066 1061 aa11.19□□□□□ -0.62
LINC01858-201ENST00000564534 ITGA6P23229 1130 aa11.19□□□□□ -0.62
LINC01858-201ENST00000564534 TGFB2P61812 414 aa11.19□□□□□ -0.62
LINC01858-201ENST00000564534 MASTLQ96GX5 879 aa11.19□□□□□ -0.62
LINC01858-201ENST00000564534 CDC5LQ99459 802 aaKnown RBP11.19□□□□□ -0.62
LINC01858-201ENST00000564534 LHX6Q9UPM6 363 aa11.19□□□□□ -0.62
LINC01858-201ENST00000564534 PCDHB15Q9Y5E8 787 aa11.19□□□□□ -0.62
LINC01858-201ENST00000564534 SRGNP10124 158 aa11.18□□□□□ -0.62
LINC01858-201ENST00000564534 PNMA6EA0A0J9YXQ4 647 aa11.17□□□□□ -0.62
LINC01858-201ENST00000564534 HOXA10P31260 410 aaPredicted RBP11.17□□□□□ -0.62
LINC01858-201ENST00000564534 IGHMBP2P38935 993 aaKnown RBP11.17□□□□□ -0.62
LINC01858-201ENST00000564534 STYK1Q6J9G0 422 aa11.17□□□□□ -0.62
LINC01858-201ENST00000564534 SSH3Q8TE77 659 aa11.17□□□□□ -0.62
LINC01858-201ENST00000564534 ZNF622Q969S3 477 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC01858-201ENST00000564534 COL11A2P13942 1736 aaPredicted RBP11.16□□□□□ -0.62
LINC01858-201ENST00000564534 ALDH1B1P30837 517 aa11.16□□□□□ -0.62
LINC01858-201ENST00000564534 GRAPQ13588 217 aa11.16□□□□□ -0.62
LINC01858-201ENST00000564534 ANKRD18AQ8IVF6 992 aa11.16□□□□□ -0.62
LINC01858-201ENST00000564534 GRAPLQ8TC17 118 aaPredicted RBP11.16□□□□□ -0.62
LINC01858-201ENST00000564534 CNKSR1Q969H4 720 aa11.16□□□□□ -0.62
LINC01858-201ENST00000564534 CRAMP1Q96RY5 1269 aa11.16□□□□□ -0.62
LINC01858-201ENST00000564534 MPHOSPH8Q99549 860 aa11.16□□□□□ -0.62
LINC01858-201ENST00000564534 RWDD1Q9H446 243 aaPredicted RBP11.16□□□□□ -0.62
LINC01858-201ENST00000564534 SEC31BQ9NQW1 1179 aa11.16□□□□□ -0.62
LINC01858-201ENST00000564534 CHRNA5P30532 468 aa11.16□□□□□ -0.62
LINC01858-201ENST00000564534 HDAC1Q13547 482 aaPredicted RBP11.16□□□□□ -0.62
LINC01858-201ENST00000564534 SPNS2Q8IVW8 549 aa11.16□□□□□ -0.62
LINC01858-201ENST00000564534 SIRT2Q8IXJ6 389 aa11.16□□□□□ -0.62
LINC01858-201ENST00000564534 COPRSQ9NQ92 184 aa11.16□□□□□ -0.62
LINC01858-201ENST00000564534 LRP5O75197 1615 aa11.16□□□□□ -0.62
LINC01858-201ENST00000564534 SRCAPQ6ZRS2 3230 aa11.15□□□□□ -0.62
LINC01858-201ENST00000564534 A0A0G2JLW4 131 aa11.15□□□□□ -0.62
LINC01858-201ENST00000564534 BBOX1O75936 387 aa11.15□□□□□ -0.62
LINC01858-201ENST00000564534 DPEP1P16444 411 aa11.15□□□□□ -0.62
LINC01858-201ENST00000564534 RFX5P48382 616 aaPredicted RBP11.15□□□□□ -0.62
LINC01858-201ENST00000564534 RPS8P62241 208 aaKnown RBP11.15□□□□□ -0.62
LINC01858-201ENST00000564534 MFSD10Q14728 455 aa11.15□□□□□ -0.62
LINC01858-201ENST00000564534 TMC4Q7Z404 712 aa11.15□□□□□ -0.62
LINC01858-201ENST00000564534 FHDC1Q9C0D6 1143 aaPredicted RBP11.15□□□□□ -0.62
LINC01858-201ENST00000564534 DLEC1Q9Y238 1755 aa11.15□□□□□ -0.63
LINC01858-201ENST00000564534 SURF6O75683 361 aaKnown RBP11.14□□□□□ -0.63
LINC01858-201ENST00000564534 PTPN12Q05209 780 aaKnown RBP11.14□□□□□ -0.63
LINC01858-201ENST00000564534 HSP90AB4PQ58FF6 505 aa11.14□□□□□ -0.63
LINC01858-201ENST00000564534 LDHAL6AQ6ZMR3 332 aa11.14□□□□□ -0.63
LINC01858-201ENST00000564534 PAXIP1Q6ZW49 1069 aaPredicted RBP11.14□□□□□ -0.63
LINC01858-201ENST00000564534 KLHDC4Q8TBB5 520 aa11.14□□□□□ -0.63
LINC01858-201ENST00000564534 OXER1Q8TDS5 423 aa11.14□□□□□ -0.63
LINC01858-201ENST00000564534 CELF1Q92879 486 aaKnown RBP11.14□□□□□ -0.63
LINC01858-201ENST00000564534 ZNF594Q96JF6 807 aaPredicted RBP11.14□□□□□ -0.63
LINC01858-201ENST00000564534 CCDC136Q96JN2 1154 aa11.14□□□□□ -0.63
LINC01858-201ENST00000564534 TMX4Q9H1E5 349 aaPredicted RBP11.14□□□□□ -0.63
LINC01858-201ENST00000564534 CNNM1Q9NRU3 951 aa11.14□□□□□ -0.63
LINC01858-201ENST00000564534 PPP4R2Q9NY27 417 aa11.14□□□□□ -0.63
LINC01858-201ENST00000564534 G3BP1Q13283 466 aaKnown RBP eCLIP11.14□□□□□ -0.63
LINC01858-201ENST00000564534 OS9Q13438 667 aaPredicted RBP11.14□□□□□ -0.63
LINC01858-201ENST00000564534 TTLL6Q8N841 843 aa11.14□□□□□ -0.63
LINC01858-201ENST00000564534 SIL1Q9H173 461 aa11.14□□□□□ -0.63
LINC01858-201ENST00000564534 BSDC1Q9NW68 430 aaPredicted RBP11.14□□□□□ -0.63
LINC01858-201ENST00000564534 PIM2Q9P1W9 311 aa11.14□□□□□ -0.63
LINC01858-201ENST00000564534 EYA2O00167 538 aa11.13□□□□□ -0.63
LINC01858-201ENST00000564534 PPEF1O14829 653 aaPredicted RBP11.13□□□□□ -0.63
LINC01858-201ENST00000564534 CIAO1O76071 339 aa11.13□□□□□ -0.63
LINC01858-201ENST00000564534 PRPF40BQ6NWY9 871 aaKnown RBP11.13□□□□□ -0.63
LINC01858-201ENST00000564534 ERC1Q8IUD2 1116 aa11.13□□□□□ -0.63
LINC01858-201ENST00000564534 PA2G4Q9UQ80 394 aaKnown RBP11.13□□□□□ -0.63
LINC01858-201ENST00000564534 NOP58Q9Y2X3 529 aaKnown RBP11.13□□□□□ -0.63
LINC01858-201ENST00000564534 KIAA1551Q9HCM1 1747 aa11.13□□□□□ -0.63
LINC01858-201ENST00000564534 PBX2P40425 430 aa11.12□□□□□ -0.63
LINC01858-201ENST00000564534 IL15P40933 162 aaPredicted RBP11.12□□□□□ -0.63
LINC01858-201ENST00000564534 DALRD3Q5D0E6 543 aaKnown RBP11.12□□□□□ -0.63
LINC01858-201ENST00000564534 NLGN2Q8NFZ4 835 aa11.12□□□□□ -0.63
LINC01858-201ENST00000564534 GCC1Q96CN9 775 aa11.12□□□□□ -0.63
LINC01858-201ENST00000564534 TAF1P21675 1872 aa11.12□□□□□ -0.63
LINC01858-201ENST00000564534 SPEF2Q9C093 1822 aa11.12□□□□□ -0.63
LINC01858-201ENST00000564534 RAB11FIP3O75154 756 aa11.12□□□□□ -0.63
LINC01858-201ENST00000564534 KCNA3P22001 575 aa11.12□□□□□ -0.63
LINC01858-201ENST00000564534 SYT17Q9BSW7 474 aa11.12□□□□□ -0.63
LINC01858-201ENST00000564534 DCTPP1Q9H773 170 aa11.12□□□□□ -0.63
LINC01858-201ENST00000564534 TSHZ2Q9NRE2 1034 aa11.12□□□□□ -0.63
LINC01858-201ENST00000564534 EXOC6BQ9Y2D4 811 aa11.12□□□□□ -0.63
LINC01858-201ENST00000564534 MROH5Q6ZUA9 1318 aa11.11□□□□□ -0.63
LINC01858-201ENST00000564534 LRRC24Q50LG9 513 aa11.11□□□□□ -0.63
LINC01858-201ENST00000564534 METTL24Q5JXM2 366 aa11.11□□□□□ -0.63
LINC01858-201ENST00000564534 PUS3Q9BZE2 481 aaKnown RBP11.11□□□□□ -0.63
LINC01858-201ENST00000564534 ATP6V0A2Q9Y487 856 aa11.11□□□□□ -0.63
LINC01858-201ENST00000564534 CACNA1SQ13698 1873 aa11.11□□□□□ -0.63
LINC01858-201ENST00000564534 IGHDP01880 384 aa11.1□□□□□ -0.63
LINC01858-201ENST00000564534 SOGA3Q5TF21 947 aa11.1□□□□□ -0.63
LINC01858-201ENST00000564534 CC2D2BQ6DHV5 1058 aa11.1□□□□□ -0.63
LINC01858-201ENST00000564534 ATG9AQ7Z3C6 839 aa11.1□□□□□ -0.63
LINC01858-201ENST00000564534 SP8Q8IXZ3 490 aa11.1□□□□□ -0.63
LINC01858-201ENST00000564534 ANKRD2Q9GZV1 360 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms