RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 BCAMP50895 628 aa21.76■■□□□ 1.07
COMMD4-208ENST00000563220 ANAPC15P60006 121 aa21.76■■□□□ 1.07
COMMD4-208ENST00000563220 IL17RAQ96F46 866 aa21.76■■□□□ 1.07
COMMD4-208ENST00000563220 CCDC171Q6TFL3 1326 aa21.76■■□□□ 1.07
COMMD4-208ENST00000563220 UBE4AQ14139 1066 aa21.75■■□□□ 1.07
COMMD4-208ENST00000563220 CRY2Q49AN0 593 aa21.75■■□□□ 1.07
COMMD4-208ENST00000563220 HSCBQ8IWL3 235 aa21.75■■□□□ 1.07
COMMD4-208ENST00000563220 RNF113AO15541 343 aaKnown RBP21.75■■□□□ 1.07
COMMD4-208ENST00000563220 CYP2E1P05181 493 aaPredicted RBP21.75■■□□□ 1.07
COMMD4-208ENST00000563220 GRAPQ13588 217 aa21.75■■□□□ 1.07
COMMD4-208ENST00000563220 MCMDC2Q4G0Z9 681 aa21.75■■□□□ 1.07
COMMD4-208ENST00000563220 GRAPLQ8TC17 118 aaPredicted RBP21.75■■□□□ 1.07
COMMD4-208ENST00000563220 MAP4K1Q92918 833 aa21.75■■□□□ 1.07
COMMD4-208ENST00000563220 RGPD3A6NKT7 1758 aaPredicted RBP21.74■■□□□ 1.07
COMMD4-208ENST00000563220 RGPD4Q7Z3J3 1758 aa21.74■■□□□ 1.07
COMMD4-208ENST00000563220 SLC15A2Q16348 729 aa21.74■■□□□ 1.07
COMMD4-208ENST00000563220 ZMYM1Q5SVZ6 1142 aa21.74■■□□□ 1.07
COMMD4-208ENST00000563220 CCDC129Q6ZRS4 1044 aa21.74■■□□□ 1.07
COMMD4-208ENST00000563220 HMG20BQ9P0W2 317 aa21.74■■□□□ 1.07
COMMD4-208ENST00000563220 RASEFQ8IZ41 740 aa21.73■■□□□ 1.07
COMMD4-208ENST00000563220 RASGRF1Q13972 1273 aa21.73■■□□□ 1.07
COMMD4-208ENST00000563220 SLC51AQ86UW1 340 aa21.73■■□□□ 1.07
COMMD4-208ENST00000563220 HELLSQ9NRZ9 838 aa21.73■■□□□ 1.07
COMMD4-208ENST00000563220 KLRG2A4D1S0 409 aaPredicted RBP21.72■■□□□ 1.07
COMMD4-208ENST00000563220 NECTIN1Q15223 517 aa21.72■■□□□ 1.07
COMMD4-208ENST00000563220 DEFB132Q7Z7B7 95 aa21.72■■□□□ 1.07
COMMD4-208ENST00000563220 RPGRQ92834 1020 aaKnown RBP21.72■■□□□ 1.07
COMMD4-208ENST00000563220 PIH1D3Q9NQM4 214 aaKnown RBP21.72■■□□□ 1.07
COMMD4-208ENST00000563220 SNX14Q9Y5W7 946 aa21.72■■□□□ 1.07
COMMD4-208ENST00000563220 MSL1Q68DK7 614 aa21.71■■□□□ 1.07
COMMD4-208ENST00000563220 SPATA5Q8NB90 893 aa21.71■■□□□ 1.07
COMMD4-208ENST00000563220 ANKRD2Q9GZV1 360 aa21.71■■□□□ 1.07
COMMD4-208ENST00000563220 RBM8AQ9Y5S9 174 aaKnown RBP21.71■■□□□ 1.07
COMMD4-208ENST00000563220 ARAP2Q8WZ64 1704 aa21.71■■□□□ 1.07
COMMD4-208ENST00000563220 MMP10P09238 476 aa21.71■■□□□ 1.07
COMMD4-208ENST00000563220 GYG1P46976 350 aa21.71■■□□□ 1.07
COMMD4-208ENST00000563220 PRPF40BQ6NWY9 871 aaKnown RBP21.71■■□□□ 1.07
COMMD4-208ENST00000563220 KCNB2Q92953 911 aa21.71■■□□□ 1.07
COMMD4-208ENST00000563220 AKAP11Q9UKA4 1901 aa21.7■■□□□ 1.07
COMMD4-208ENST00000563220 TTF1Q15361 905 aaPredicted RBP21.7■■□□□ 1.06
COMMD4-208ENST00000563220 OSBP2Q969R2 916 aa21.7■■□□□ 1.06
COMMD4-208ENST00000563220 STK32BQ9NY57 414 aa21.7■■□□□ 1.06
COMMD4-208ENST00000563220 KLRK1P26718 216 aa21.69■■□□□ 1.06
COMMD4-208ENST00000563220 SF3B2Q13435 895 aaKnown RBP21.69■■□□□ 1.06
COMMD4-208ENST00000563220 SPRYD3Q8NCJ5 442 aa21.69■■□□□ 1.06
COMMD4-208ENST00000563220 RBM17Q96I25 401 aaKnown RBP21.69■■□□□ 1.06
COMMD4-208ENST00000563220 FAM84BQ96KN1 310 aaPredicted RBP21.69■■□□□ 1.06
COMMD4-208ENST00000563220 ZNF804BA4D1E1 1349 aa21.69■■□□□ 1.06
COMMD4-208ENST00000563220 ZFYP08048 801 aaPredicted RBP21.69■■□□□ 1.06
COMMD4-208ENST00000563220 HOXA10P31260 410 aaPredicted RBP21.69■■□□□ 1.06
COMMD4-208ENST00000563220 BAG6P46379 1132 aa21.69■■□□□ 1.06
COMMD4-208ENST00000563220 NEK4P51957 841 aa21.69■■□□□ 1.06
COMMD4-208ENST00000563220 LRRFIP1Q32MZ4 808 aaKnown RBP21.69■■□□□ 1.06
COMMD4-208ENST00000563220 K7ELQ4 463 aaPredicted RBP21.68■■□□□ 1.06
COMMD4-208ENST00000563220 CREB3L3Q68CJ9 461 aa21.68■■□□□ 1.06
COMMD4-208ENST00000563220 BRIP1Q9BX63 1249 aa21.68■■□□□ 1.06
COMMD4-208ENST00000563220 PARP3Q9Y6F1 533 aa21.68■■□□□ 1.06
COMMD4-208ENST00000563220 MAST3O60307 1309 aa21.68■■□□□ 1.06
COMMD4-208ENST00000563220 M0R2C6 588 aa21.67■■□□□ 1.06
COMMD4-208ENST00000563220 KCNJ4P48050 445 aa21.67■■□□□ 1.06
COMMD4-208ENST00000563220 FBXO33Q7Z6M2 555 aa21.67■■□□□ 1.06
COMMD4-208ENST00000563220 IQSEC3Q9UPP2 1182 aaPredicted RBP21.67■■□□□ 1.06
COMMD4-208ENST00000563220 ST18O60284 1047 aa21.66■■□□□ 1.06
COMMD4-208ENST00000563220 CAVIN4Q5BKX8 364 aa21.66■■□□□ 1.06
COMMD4-208ENST00000563220 SLC27A2O14975 620 aa21.66■■□□□ 1.06
COMMD4-208ENST00000563220 IDH1O75874 414 aaKnown RBP21.66■■□□□ 1.06
COMMD4-208ENST00000563220 ADD2P35612 726 aa21.66■■□□□ 1.06
COMMD4-208ENST00000563220 WASHC4Q2M389 1173 aa21.66■■□□□ 1.06
COMMD4-208ENST00000563220 SLC9C2Q5TAH2 1124 aa21.66■■□□□ 1.06
COMMD4-208ENST00000563220 VPS53Q5VIR6 699 aa21.66■■□□□ 1.06
COMMD4-208ENST00000563220 APPBP2Q92624 585 aa21.66■■□□□ 1.06
COMMD4-208ENST00000563220 UPF3BQ9BZI7 483 aaKnown RBP21.66■■□□□ 1.06
COMMD4-208ENST00000563220 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.66■■□□□ 1.06
COMMD4-208ENST00000563220 PUS7LQ9H0K6 701 aaKnown RBP21.66■■□□□ 1.06
COMMD4-208ENST00000563220 SLKQ9H2G2 1235 aaPredicted RBP21.66■■□□□ 1.06
COMMD4-208ENST00000563220 A0A1B0GUL6 1792 aa21.66■■□□□ 1.06
COMMD4-208ENST00000563220 CRAMP1Q96RY5 1269 aa21.65■■□□□ 1.06
COMMD4-208ENST00000563220 WWC3Q9ULE0 1092 aa21.65■■□□□ 1.06
COMMD4-208ENST00000563220 IRS2Q9Y4H2 1338 aa21.65■■□□□ 1.06
COMMD4-208ENST00000563220 BBOX1O75936 387 aa21.64■■□□□ 1.06
COMMD4-208ENST00000563220 ADCK5Q3MIX3 580 aa21.64■■□□□ 1.06
COMMD4-208ENST00000563220 ZSCAN25Q6NSZ9 544 aa21.64■■□□□ 1.06
COMMD4-208ENST00000563220 TXNRD3Q86VQ6 643 aa21.64■■□□□ 1.06
COMMD4-208ENST00000563220 GNL3LQ9NVN8 582 aaKnown RBP21.64■■□□□ 1.06
COMMD4-208ENST00000563220 ANKIB1Q9P2G1 1089 aa21.64■■□□□ 1.06
COMMD4-208ENST00000563220 VPS37DQ86XT2 251 aa21.64■■□□□ 1.05
COMMD4-208ENST00000563220 HSPD1P10809 573 aaKnown RBP21.63■■□□□ 1.05
COMMD4-208ENST00000563220 PDE6AP16499 860 aa21.63■■□□□ 1.05
COMMD4-208ENST00000563220 UBE3CQ15386 1083 aa21.63■■□□□ 1.05
COMMD4-208ENST00000563220 DSCC1Q9BVC3 393 aa21.63■■□□□ 1.05
COMMD4-208ENST00000563220 LEMD3Q9Y2U8 911 aa21.63■■□□□ 1.05
COMMD4-208ENST00000563220 TAF6LQ9Y6J9 622 aa21.63■■□□□ 1.05
COMMD4-208ENST00000563220 NRXN2Q9P2S2 1712 aa21.63■■□□□ 1.05
COMMD4-208ENST00000563220 TCRBV5S4A2TA0A5A2 114 aa21.62■■□□□ 1.05
COMMD4-208ENST00000563220 SRGNP10124 158 aa21.62■■□□□ 1.05
COMMD4-208ENST00000563220 ZKSCAN1P17029 563 aaPredicted RBP21.62■■□□□ 1.05
COMMD4-208ENST00000563220 GPSM2P81274 684 aa21.62■■□□□ 1.05
COMMD4-208ENST00000563220 U3KPZ7 1027 aaPredicted RBP21.62■■□□□ 1.05
COMMD4-208ENST00000563220 XDHP47989 1333 aa21.62■■□□□ 1.05
COMMD4-208ENST00000563220 ZNF532Q9HCE3 1301 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms