RNA–Protein interactions for RNA: ENST00000562616.1

CCP110-206, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 1,679 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-206ENST00000562616 ARHGAP45Q92619 1136 aa11.36□□□□□ -0.59
CCP110-206ENST00000562616 SEPT9Q9UHD8 586 aaPredicted RBP11.36□□□□□ -0.59
CCP110-206ENST00000562616 UBR2Q8IWV8 1755 aa11.36□□□□□ -0.59
CCP110-206ENST00000562616 C5P01031 1676 aa11.35□□□□□ -0.59
CCP110-206ENST00000562616 KCNQ3O43525 872 aa11.35□□□□□ -0.59
CCP110-206ENST00000562616 PTCD1O75127 700 aaKnown RBP11.35□□□□□ -0.59
CCP110-206ENST00000562616 HOXB7P09629 217 aa11.35□□□□□ -0.59
CCP110-206ENST00000562616 TRIM27P14373 513 aa11.35□□□□□ -0.59
CCP110-206ENST00000562616 FTSJ3Q8IY81 847 aaKnown RBP11.35□□□□□ -0.59
CCP110-206ENST00000562616 TTC5Q8N0Z6 440 aa11.35□□□□□ -0.59
CCP110-206ENST00000562616 LRRN4Q8WUT4 740 aa11.35□□□□□ -0.59
CCP110-206ENST00000562616 CHMP4AQ9BY43 222 aa11.35□□□□□ -0.59
CCP110-206ENST00000562616 CCNL1Q9UK58 526 aaPredicted RBP11.35□□□□□ -0.59
CCP110-206ENST00000562616 TNNQ9UQP3 1299 aa11.35□□□□□ -0.59
CCP110-206ENST00000562616 KCPQ6ZWJ8 1503 aa11.35□□□□□ -0.59
CCP110-206ENST00000562616 ATP9BO43861 1147 aa11.34□□□□□ -0.59
CCP110-206ENST00000562616 RLBP1P12271 317 aa11.34□□□□□ -0.59
CCP110-206ENST00000562616 CCDC30Q5VVM6 783 aa11.34□□□□□ -0.59
CCP110-206ENST00000562616 CCDC136Q96JN2 1154 aa11.34□□□□□ -0.59
CCP110-206ENST00000562616 SPON1Q9HCB6 807 aa11.34□□□□□ -0.59
CCP110-206ENST00000562616 TAF1LQ8IZX4 1826 aa11.34□□□□□ -0.59
CCP110-206ENST00000562616 TJP1Q07157 1748 aa11.34□□□□□ -0.59
CCP110-206ENST00000562616 LOC102724428A0A0B4J2F2 783 aa11.33□□□□□ -0.6
CCP110-206ENST00000562616 RBM47A0AV96 593 aaKnown RBP11.33□□□□□ -0.6
CCP110-206ENST00000562616 ERCC3P19447 782 aa11.33□□□□□ -0.6
CCP110-206ENST00000562616 SIK1P57059 783 aa11.33□□□□□ -0.6
CCP110-206ENST00000562616 ELOAQ14241 798 aaKnown RBP11.33□□□□□ -0.6
CCP110-206ENST00000562616 ZNF790Q6PG37 636 aa11.33□□□□□ -0.6
CCP110-206ENST00000562616 STK31Q9BXU1 1019 aa11.33□□□□□ -0.6
CCP110-206ENST00000562616 PCDHGC3Q9UN70 934 aa11.33□□□□□ -0.6
CCP110-206ENST00000562616 HEG1Q9ULI3 1381 aa11.33□□□□□ -0.6
CCP110-206ENST00000562616 ATP6V1AP38606 617 aa11.33□□□□□ -0.6
CCP110-206ENST00000562616 PPP1R18Q6NYC8 613 aa11.33□□□□□ -0.6
CCP110-206ENST00000562616 API5Q9BZZ5 524 aaKnown RBP11.33□□□□□ -0.6
CCP110-206ENST00000562616 LRRC4BQ9NT99 713 aa11.33□□□□□ -0.6
CCP110-206ENST00000562616 AAMPQ13685 434 aa11.32□□□□□ -0.6
CCP110-206ENST00000562616 MVPQ14764 893 aaKnown RBP11.32□□□□□ -0.6
CCP110-206ENST00000562616 TJAP1Q5JTD0 557 aa11.32□□□□□ -0.6
CCP110-206ENST00000562616 SLC27A3Q5K4L6 730 aa11.32□□□□□ -0.6
CCP110-206ENST00000562616 SLF2Q8IX21 1173 aa11.32□□□□□ -0.6
CCP110-206ENST00000562616 PPP1R1BQ9UD71 204 aaPredicted RBP11.32□□□□□ -0.6
CCP110-206ENST00000562616 ZNF831Q5JPB2 1677 aa11.32□□□□□ -0.6
CCP110-206ENST00000562616 COL5A3P25940 1745 aaPredicted RBP11.31□□□□□ -0.6
CCP110-206ENST00000562616 TRIM6-TRIM34B2RNG4 842 aa11.31□□□□□ -0.6
CCP110-206ENST00000562616 GIGYF1O75420 1035 aaPredicted RBP11.31□□□□□ -0.6
CCP110-206ENST00000562616 HMGB1P09429 215 aaKnown RBP11.31□□□□□ -0.6
CCP110-206ENST00000562616 TBC1D9Q6ZT07 1266 aa11.31□□□□□ -0.6
CCP110-206ENST00000562616 ZNF496Q96IT1 587 aaPredicted RBP11.31□□□□□ -0.6
CCP110-206ENST00000562616 SLC4A9Q96Q91 983 aa11.31□□□□□ -0.6
CCP110-206ENST00000562616 PDGFDQ9GZP0 370 aaPredicted RBP11.31□□□□□ -0.6
CCP110-206ENST00000562616 PTPRCP08575 1304 aa11.31□□□□□ -0.6
CCP110-206ENST00000562616 CICQ96RK0 1608 aaPredicted RBP11.31□□□□□ -0.6
CCP110-206ENST00000562616 EIF2S2P20042 333 aaKnown RBP11.3□□□□□ -0.6
CCP110-206ENST00000562616 ITPK1Q13572 414 aa11.3□□□□□ -0.6
CCP110-206ENST00000562616 FMNL2Q96PY5 1086 aa11.3□□□□□ -0.6
CCP110-206ENST00000562616 C4BP0C0L5 1744 aa11.3□□□□□ -0.6
CCP110-206ENST00000562616 GRIPAP1Q4V328 841 aa11.3□□□□□ -0.6
CCP110-206ENST00000562616 ITPRIPQ8IWB1 547 aa11.3□□□□□ -0.6
CCP110-206ENST00000562616 TMEM57Q8N5G2 664 aa11.3□□□□□ -0.6
CCP110-206ENST00000562616 LINC00116Q8NCU8 138 aa11.3□□□□□ -0.6
CCP110-206ENST00000562616 DDX19BQ9UMR2 479 aa11.3□□□□□ -0.6
CCP110-206ENST00000562616 ABCC4O15439 1325 aa11.29□□□□□ -0.6
CCP110-206ENST00000562616 LAMB4A4D0S4 1761 aa11.29□□□□□ -0.6
CCP110-206ENST00000562616 TUBGCP6Q96RT7 1819 aa11.29□□□□□ -0.6
CCP110-206ENST00000562616 DNAJC10Q8IXB1 793 aa11.29□□□□□ -0.6
CCP110-206ENST00000562616 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.29□□□□□ -0.6
CCP110-206ENST00000562616 CACNA1FO60840 1977 aa11.28□□□□□ -0.6
CCP110-206ENST00000562616 PRAMEF22A3QJZ6 481 aa11.28□□□□□ -0.6
CCP110-206ENST00000562616 C6orf229H3BNL8 230 aa11.28□□□□□ -0.6
CCP110-206ENST00000562616 SNRPA1P09661 255 aaKnown RBP11.28□□□□□ -0.6
CCP110-206ENST00000562616 ZNF827Q17R98 1081 aa11.28□□□□□ -0.6
CCP110-206ENST00000562616 G2E3Q7L622 706 aa11.28□□□□□ -0.6
CCP110-206ENST00000562616 STK32BQ9NY57 414 aa11.28□□□□□ -0.6
CCP110-206ENST00000562616 CFAP99D6REC4 459 aa11.27□□□□□ -0.6
CCP110-206ENST00000562616 PPP4CP60510 307 aa11.27□□□□□ -0.6
CCP110-206ENST00000562616 GUCA2AQ02747 115 aa11.27□□□□□ -0.6
CCP110-206ENST00000562616 EPS8L1Q8TE68 723 aa11.27□□□□□ -0.6
CCP110-206ENST00000562616 CHMP4BQ9H444 224 aaKnown RBP11.27□□□□□ -0.6
CCP110-206ENST00000562616 CHPF2Q9P2E5 772 aa11.27□□□□□ -0.6
CCP110-206ENST00000562616 DBF4Q9UBU7 674 aaPredicted RBP11.27□□□□□ -0.6
CCP110-206ENST00000562616 UNCXA6NJT0 531 aa11.27□□□□□ -0.61
CCP110-206ENST00000562616 C3orf80F5H4A9 247 aa11.27□□□□□ -0.61
CCP110-206ENST00000562616 IL21Q9HBE4 155 aa11.27□□□□□ -0.61
CCP110-206ENST00000562616 ZBTB7AO95365 584 aa11.26□□□□□ -0.61
CCP110-206ENST00000562616 FKBP5Q13451 457 aaPredicted RBP11.26□□□□□ -0.61
CCP110-206ENST00000562616 SLC15A2Q16348 729 aa11.26□□□□□ -0.61
CCP110-206ENST00000562616 INTS3Q68E01 1043 aaKnown RBP11.26□□□□□ -0.61
CCP110-206ENST00000562616 UBR3Q6ZT12 1888 aa11.26□□□□□ -0.61
CCP110-206ENST00000562616 ZNF784Q8NCA9 323 aaPredicted RBP11.26□□□□□ -0.61
CCP110-206ENST00000562616 ARID4AP29374 1257 aaPredicted RBP11.25□□□□□ -0.61
CCP110-206ENST00000562616 CRKLP46109 303 aaKnown RBP11.25□□□□□ -0.61
CCP110-206ENST00000562616 TMEM164Q5U3C3 297 aa11.25□□□□□ -0.61
CCP110-206ENST00000562616 PHAXQ9H814 394 aaKnown RBP11.25□□□□□ -0.61
CCP110-206ENST00000562616 DDX21Q9NR30 783 aaKnown RBP eCLIP11.25□□□□□ -0.61
CCP110-206ENST00000562616 ZBTB40Q9NUA8 1239 aa11.25□□□□□ -0.61
CCP110-206ENST00000562616 HYPKQ9NX55 129 aa11.25□□□□□ -0.61
CCP110-206ENST00000562616 TFCP2L1Q9NZI6 479 aa11.25□□□□□ -0.61
CCP110-206ENST00000562616 USP16Q9Y5T5 823 aa11.25□□□□□ -0.61
CCP110-206ENST00000562616 MYH14Q7Z406 1995 aaKnown RBP11.25□□□□□ -0.61
CCP110-206ENST00000562616 QSER1Q2KHR3 1735 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms