RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 RPGRQ92834 1020 aaKnown RBP9.32□□□□□ -0.92
CNEP1R1-204ENST00000562576 CDCA5Q96FF9 252 aa9.32□□□□□ -0.92
CNEP1R1-204ENST00000562576 FMNL2Q96PY5 1086 aa9.32□□□□□ -0.92
CNEP1R1-204ENST00000562576 PANK3Q9H999 370 aa9.32□□□□□ -0.92
CNEP1R1-204ENST00000562576 PAPPA2Q9BXP8 1791 aa9.32□□□□□ -0.92
CNEP1R1-204ENST00000562576 UBN2Q6ZU65 1347 aa9.31□□□□□ -0.92
CNEP1R1-204ENST00000562576 PSMD14O00487 310 aa9.31□□□□□ -0.92
CNEP1R1-204ENST00000562576 NPM2Q86SE8 214 aaKnown RBP9.31□□□□□ -0.92
CNEP1R1-204ENST00000562576 MORC1Q86VD1 984 aa9.31□□□□□ -0.92
CNEP1R1-204ENST00000562576 ZNF428Q96B54 188 aa9.31□□□□□ -0.92
CNEP1R1-204ENST00000562576 PPP1R3GB7ZBB8 358 aa9.3□□□□□ -0.92
CNEP1R1-204ENST00000562576 H7C1D1 291 aa9.3□□□□□ -0.92
CNEP1R1-204ENST00000562576 TEFQ10587 303 aa9.3□□□□□ -0.92
CNEP1R1-204ENST00000562576 CDCA8Q53HL2 280 aa9.3□□□□□ -0.92
CNEP1R1-204ENST00000562576 TTLL7Q6ZT98 887 aa9.3□□□□□ -0.92
CNEP1R1-204ENST00000562576 FBXW7Q969H0 707 aa9.3□□□□□ -0.92
CNEP1R1-204ENST00000562576 CRAMP1Q96RY5 1269 aa9.3□□□□□ -0.92
CNEP1R1-204ENST00000562576 RTFDC1Q9BY42 306 aaPredicted RBP9.3□□□□□ -0.92
CNEP1R1-204ENST00000562576 ATP6V0A2Q9Y487 856 aa9.3□□□□□ -0.92
CNEP1R1-204ENST00000562576 KIAA2012Q0VF49 1180 aa9.29□□□□□ -0.92
CNEP1R1-204ENST00000562576 TNIP1Q15025 636 aa9.29□□□□□ -0.92
CNEP1R1-204ENST00000562576 RBM17Q96I25 401 aaKnown RBP9.29□□□□□ -0.92
CNEP1R1-204ENST00000562576 DBNDD1Q9H9R9 158 aa9.29□□□□□ -0.92
CNEP1R1-204ENST00000562576 RBM27Q9P2N5 1060 aaKnown RBP9.29□□□□□ -0.92
CNEP1R1-204ENST00000562576 RABGEF1Q9UJ41 708 aa9.29□□□□□ -0.92
CNEP1R1-204ENST00000562576 ZNF652Q9Y2D9 606 aa9.29□□□□□ -0.92
CNEP1R1-204ENST00000562576 SIPA1L3O60292 1781 aaPredicted RBP9.29□□□□□ -0.92
CNEP1R1-204ENST00000562576 ABCC4O15439 1325 aa9.29□□□□□ -0.92
CNEP1R1-204ENST00000562576 BTBD11A6QL63 1104 aa9.28□□□□□ -0.92
CNEP1R1-204ENST00000562576 MYCP01106 439 aaPredicted RBP9.28□□□□□ -0.92
CNEP1R1-204ENST00000562576 DPP8Q6V1X1 898 aaPredicted RBP9.28□□□□□ -0.92
CNEP1R1-204ENST00000562576 DCPSQ96C86 337 aaKnown RBP9.28□□□□□ -0.92
CNEP1R1-204ENST00000562576 PHACTR3Q96KR7 559 aa9.28□□□□□ -0.92
CNEP1R1-204ENST00000562576 MIS18AQ9NYP9 233 aa9.28□□□□□ -0.92
CNEP1R1-204ENST00000562576 GGA3Q9NZ52 723 aa9.28□□□□□ -0.92
CNEP1R1-204ENST00000562576 RIC1Q4ADV7 1423 aa9.28□□□□□ -0.92
CNEP1R1-204ENST00000562576 KIF7Q2M1P5 1343 aa9.28□□□□□ -0.92
CNEP1R1-204ENST00000562576 RTL9Q8NET4 1388 aa9.27□□□□□ -0.93
CNEP1R1-204ENST00000562576 KIAA0100Q14667 2235 aaKnown RBP9.27□□□□□ -0.93
CNEP1R1-204ENST00000562576 FKTNO75072 461 aa9.27□□□□□ -0.93
CNEP1R1-204ENST00000562576 NTSR2O95665 410 aa9.27□□□□□ -0.93
CNEP1R1-204ENST00000562576 TM4SF4P48230 202 aa9.27□□□□□ -0.93
CNEP1R1-204ENST00000562576 TYW1BQ6NUM6 668 aa9.27□□□□□ -0.93
CNEP1R1-204ENST00000562576 OTOP1Q7RTM1 612 aa9.27□□□□□ -0.93
CNEP1R1-204ENST00000562576 MPNDQ8N594 471 aa9.27□□□□□ -0.93
CNEP1R1-204ENST00000562576 ZBTB3Q9H5J0 574 aa9.27□□□□□ -0.93
CNEP1R1-204ENST00000562576 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.27□□□□□ -0.93
CNEP1R1-204ENST00000562576 FZD1Q9UP38 647 aa9.27□□□□□ -0.93
CNEP1R1-204ENST00000562576 TRIM17Q9Y577 477 aa9.27□□□□□ -0.93
CNEP1R1-204ENST00000562576 PCDHGA10Q9Y5H3 936 aa9.27□□□□□ -0.93
CNEP1R1-204ENST00000562576 TAF1P21675 1872 aa9.27□□□□□ -0.93
CNEP1R1-204ENST00000562576 WTIPA6NIX2 430 aaPredicted RBP9.26□□□□□ -0.93
CNEP1R1-204ENST00000562576 GNAT3A8MTJ3 354 aa9.26□□□□□ -0.93
CNEP1R1-204ENST00000562576 SOX1O00570 391 aaPredicted RBP9.26□□□□□ -0.93
CNEP1R1-204ENST00000562576 DCTN1Q14203 1278 aa9.26□□□□□ -0.93
CNEP1R1-204ENST00000562576 KIF4BQ2VIQ3 1234 aa9.26□□□□□ -0.93
CNEP1R1-204ENST00000562576 ANGEL2Q5VTE6 544 aaKnown RBP9.26□□□□□ -0.93
CNEP1R1-204ENST00000562576 LAPTM4BQ86VI4 370 aa9.26□□□□□ -0.93
CNEP1R1-204ENST00000562576 ANKK1Q8NFD2 765 aa9.26□□□□□ -0.93
CNEP1R1-204ENST00000562576 EMILIN3Q9NT22 766 aa9.26□□□□□ -0.93
CNEP1R1-204ENST00000562576 CDHR2Q9BYE9 1310 aa9.26□□□□□ -0.93
CNEP1R1-204ENST00000562576 COL4A1P02462 1669 aa9.26□□□□□ -0.93
CNEP1R1-204ENST00000562576 DUOX1Q9NRD9 1551 aa9.25□□□□□ -0.93
CNEP1R1-204ENST00000562576 SNRPA1P09661 255 aaKnown RBP9.25□□□□□ -0.93
CNEP1R1-204ENST00000562576 HCLS1P14317 486 aaPredicted RBP9.25□□□□□ -0.93
CNEP1R1-204ENST00000562576 SCARF1Q14162 830 aa9.25□□□□□ -0.93
CNEP1R1-204ENST00000562576 MCM10Q7L590 875 aa9.25□□□□□ -0.93
CNEP1R1-204ENST00000562576 SP8Q8IXZ3 490 aa9.25□□□□□ -0.93
CNEP1R1-204ENST00000562576 ZNF34Q8IZ26 560 aa9.25□□□□□ -0.93
CNEP1R1-204ENST00000562576 DPF2Q92785 391 aa9.25□□□□□ -0.93
CNEP1R1-204ENST00000562576 PRKG1Q13976 671 aa9.24□□□□□ -0.93
CNEP1R1-204ENST00000562576 GRIPAP1Q4V328 841 aa9.24□□□□□ -0.93
CNEP1R1-204ENST00000562576 NYAP1Q6ZVC0 841 aa9.24□□□□□ -0.93
CNEP1R1-204ENST00000562576 SULF1Q8IWU6 871 aa9.24□□□□□ -0.93
CNEP1R1-204ENST00000562576 CD99L2Q8TCZ2 262 aa9.24□□□□□ -0.93
CNEP1R1-204ENST00000562576 LRCH3Q96II8 777 aa9.24□□□□□ -0.93
CNEP1R1-204ENST00000562576 EPAS1Q99814 870 aa9.24□□□□□ -0.93
CNEP1R1-204ENST00000562576 NYXQ9GZU5 481 aa9.24□□□□□ -0.93
CNEP1R1-204ENST00000562576 VPS33BQ9H267 617 aa9.24□□□□□ -0.93
CNEP1R1-204ENST00000562576 POLLQ9UGP5 575 aa9.24□□□□□ -0.93
CNEP1R1-204ENST00000562576 PTPN22Q9Y2R2 807 aa9.24□□□□□ -0.93
CNEP1R1-204ENST00000562576 RRP7AQ9Y3A4 280 aaKnown RBP9.24□□□□□ -0.93
CNEP1R1-204ENST00000562576 CEMIPQ8WUJ3 1361 aa9.24□□□□□ -0.93
CNEP1R1-204ENST00000562576 MYL6BP14649 208 aa9.23□□□□□ -0.93
CNEP1R1-204ENST00000562576 PTPN12Q05209 780 aaKnown RBP9.23□□□□□ -0.93
CNEP1R1-204ENST00000562576 SUPT20HQ8NEM7 779 aa9.23□□□□□ -0.93
CNEP1R1-204ENST00000562576 NUP98P52948 1817 aa9.23□□□□□ -0.93
CNEP1R1-204ENST00000562576 MAP3K15Q6ZN16 1313 aa9.23□□□□□ -0.93
CNEP1R1-204ENST00000562576 UNC80Q8N2C7 3258 aa9.23□□□□□ -0.93
CNEP1R1-204ENST00000562576 DIAPH1O60610 1272 aaKnown RBP9.22□□□□□ -0.93
CNEP1R1-204ENST00000562576 GPSM2P81274 684 aa9.22□□□□□ -0.93
CNEP1R1-204ENST00000562576 CNGB1Q14028 1251 aaPredicted RBP9.22□□□□□ -0.93
CNEP1R1-204ENST00000562576 NOM1Q5C9Z4 860 aaKnown RBP9.22□□□□□ -0.93
CNEP1R1-204ENST00000562576 SLC10A5Q5PT55 438 aa9.22□□□□□ -0.93
CNEP1R1-204ENST00000562576 INTS3Q68E01 1043 aaKnown RBP9.22□□□□□ -0.93
CNEP1R1-204ENST00000562576 ARMC5Q96C12 935 aa9.22□□□□□ -0.93
CNEP1R1-204ENST00000562576 NLRP3Q96P20 1036 aa9.22□□□□□ -0.93
CNEP1R1-204ENST00000562576 THUMPD2Q9BTF0 503 aaKnown RBP9.22□□□□□ -0.93
CNEP1R1-204ENST00000562576 COL25A1Q9BXS0 654 aaPredicted RBP9.22□□□□□ -0.93
CNEP1R1-204ENST00000562576 ERVV-1B6SEH8 477 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms