RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 HCLS1P14317 486 aaPredicted RBP13.98□□□□□ -0.17
PCAT1-202ENST00000561978 TGFB2P61812 414 aa13.98□□□□□ -0.17
PCAT1-202ENST00000561978 TRIM28Q13263 835 aaKnown RBP13.98□□□□□ -0.17
PCAT1-202ENST00000561978 KIAA1551Q9HCM1 1747 aa13.98□□□□□ -0.17
PCAT1-202ENST00000561978 MNX1P50219 401 aaPredicted RBP13.97□□□□□ -0.17
PCAT1-202ENST00000561978 CCDC191Q8NCU4 936 aa13.97□□□□□ -0.17
PCAT1-202ENST00000561978 EAF2Q96CJ1 260 aaPredicted RBP13.97□□□□□ -0.17
PCAT1-202ENST00000561978 INTS4Q96HW7 963 aaKnown RBP13.97□□□□□ -0.17
PCAT1-202ENST00000561978 CWC25Q9NXE8 425 aaPredicted RBP13.97□□□□□ -0.17
PCAT1-202ENST00000561978 TNRC6CQ9HCJ0 1690 aaKnown RBP13.97□□□□□ -0.17
PCAT1-202ENST00000561978 SH3TC1Q8TE82 1336 aa13.96□□□□□ -0.17
PCAT1-202ENST00000561978 KCNA3P22001 575 aa13.96□□□□□ -0.17
PCAT1-202ENST00000561978 CWC27Q6UX04 472 aaKnown RBP13.96□□□□□ -0.17
PCAT1-202ENST00000561978 C3orf67Q6ZVT6 689 aa13.96□□□□□ -0.17
PCAT1-202ENST00000561978 UBE3BQ7Z3V4 1068 aa13.96□□□□□ -0.17
PCAT1-202ENST00000561978 DHX37Q8IY37 1157 aaKnown RBP13.96□□□□□ -0.17
PCAT1-202ENST00000561978 H7C1W4 665 aa13.96□□□□□ -0.18
PCAT1-202ENST00000561978 PDE6BP35913 854 aa13.96□□□□□ -0.18
PCAT1-202ENST00000561978 EPHA10Q5JZY3 1008 aa13.96□□□□□ -0.18
PCAT1-202ENST00000561978 C2CD5Q86YS7 1000 aa13.96□□□□□ -0.18
PCAT1-202ENST00000561978 TMX3Q96JJ7 454 aa13.96□□□□□ -0.18
PCAT1-202ENST00000561978 LSG1Q9H089 658 aaKnown RBP13.96□□□□□ -0.18
PCAT1-202ENST00000561978 PALD1Q9ULE6 856 aa13.96□□□□□ -0.18
PCAT1-202ENST00000561978 COL11A2P13942 1736 aaPredicted RBP13.95□□□□□ -0.18
PCAT1-202ENST00000561978 H0YIN7 160 aa13.95□□□□□ -0.18
PCAT1-202ENST00000561978 CUL4AQ13619 759 aa13.95□□□□□ -0.18
PCAT1-202ENST00000561978 ZBTB38Q8NAP3 1195 aaPredicted RBP13.95□□□□□ -0.18
PCAT1-202ENST00000561978 SIL1Q9H173 461 aa13.95□□□□□ -0.18
PCAT1-202ENST00000561978 GABBR2O75899 941 aa13.94□□□□□ -0.18
PCAT1-202ENST00000561978 CYP2E1P05181 493 aaPredicted RBP13.94□□□□□ -0.18
PCAT1-202ENST00000561978 RFX5P48382 616 aaPredicted RBP13.94□□□□□ -0.18
PCAT1-202ENST00000561978 CASP7P55210 303 aa13.94□□□□□ -0.18
PCAT1-202ENST00000561978 PTPN12Q05209 780 aaKnown RBP13.94□□□□□ -0.18
PCAT1-202ENST00000561978 ZNF622Q969S3 477 aaKnown RBP eCLIP13.94□□□□□ -0.18
PCAT1-202ENST00000561978 CCDC8Q9H0W5 538 aaPredicted RBP13.94□□□□□ -0.18
PCAT1-202ENST00000561978 ISY1Q9ULR0 285 aaKnown RBP13.94□□□□□ -0.18
PCAT1-202ENST00000561978 BRCA1P38398 1863 aaKnown RBP13.94□□□□□ -0.18
PCAT1-202ENST00000561978 IRS4O14654 1257 aaPredicted RBP13.94□□□□□ -0.18
PCAT1-202ENST00000561978 SRGNP10124 158 aa13.94□□□□□ -0.18
PCAT1-202ENST00000561978 CACNA1SQ13698 1873 aa13.94□□□□□ -0.18
PCAT1-202ENST00000561978 DDX60Q8IY21 1712 aaKnown RBP13.93□□□□□ -0.18
PCAT1-202ENST00000561978 BAG4O95429 457 aaKnown RBP13.93□□□□□ -0.18
PCAT1-202ENST00000561978 IL25Q9H293 177 aa13.93□□□□□ -0.18
PCAT1-202ENST00000561978 PIM2Q9P1W9 311 aa13.93□□□□□ -0.18
PCAT1-202ENST00000561978 BCS1LQ9Y276 419 aa13.93□□□□□ -0.18
PCAT1-202ENST00000561978 KLRG2A4D1S0 409 aaPredicted RBP13.92□□□□□ -0.18
PCAT1-202ENST00000561978 PCCAP05165 728 aaPredicted RBP13.92□□□□□ -0.18
PCAT1-202ENST00000561978 YBX3P16989 372 aaKnown RBP eCLIP13.92□□□□□ -0.18
PCAT1-202ENST00000561978 GPR162Q16538 588 aa13.92□□□□□ -0.18
PCAT1-202ENST00000561978 NLRP3Q96P20 1036 aa13.92□□□□□ -0.18
PCAT1-202ENST00000561978 SNX14Q9Y5W7 946 aa13.92□□□□□ -0.18
PCAT1-202ENST00000561978 TAF1P21675 1872 aa13.92□□□□□ -0.18
PCAT1-202ENST00000561978 GOLGA6L3A6NEY3 463 aa13.92□□□□□ -0.18
PCAT1-202ENST00000561978 ATP5JP18859 108 aa13.92□□□□□ -0.18
PCAT1-202ENST00000561978 TNNI3KQ59H18 835 aa13.92□□□□□ -0.18
PCAT1-202ENST00000561978 SLC10A5Q5PT55 438 aa13.92□□□□□ -0.18
PCAT1-202ENST00000561978 LMBR1LQ6UX01 489 aa13.92□□□□□ -0.18
PCAT1-202ENST00000561978 KLHDC4Q8TBB5 520 aa13.92□□□□□ -0.18
PCAT1-202ENST00000561978 CCDC85AQ96PX6 553 aaPredicted RBP13.92□□□□□ -0.18
PCAT1-202ENST00000561978 SNRKQ9NRH2 765 aa13.92□□□□□ -0.18
PCAT1-202ENST00000561978 FPGT-TNNI3KV9GXZ4 949 aa13.92□□□□□ -0.18
PCAT1-202ENST00000561978 LAMB2P55268 1798 aa13.92□□□□□ -0.18
PCAT1-202ENST00000561978 DLEC1Q9Y238 1755 aa13.92□□□□□ -0.18
PCAT1-202ENST00000561978 ZKSCAN1P17029 563 aaPredicted RBP13.91□□□□□ -0.18
PCAT1-202ENST00000561978 FOXO4P98177 505 aa13.91□□□□□ -0.18
PCAT1-202ENST00000561978 CRY2Q49AN0 593 aa13.91□□□□□ -0.18
PCAT1-202ENST00000561978 TICAM2Q86XR7 235 aa13.91□□□□□ -0.18
PCAT1-202ENST00000561978 ZGPATQ8N5A5 531 aaKnown RBP13.91□□□□□ -0.18
PCAT1-202ENST00000561978 MASTLQ96GX5 879 aa13.91□□□□□ -0.18
PCAT1-202ENST00000561978 TM6SF1Q9BZW5 370 aa13.91□□□□□ -0.18
PCAT1-202ENST00000561978 BOLA2Q9H3K6 86 aa13.91□□□□□ -0.18
PCAT1-202ENST00000561978 TFCP2Q12800 502 aa13.91□□□□□ -0.18
PCAT1-202ENST00000561978 RPGRQ92834 1020 aaKnown RBP13.91□□□□□ -0.18
PCAT1-202ENST00000561978 KCNB2Q92953 911 aa13.91□□□□□ -0.18
PCAT1-202ENST00000561978 FSD1Q9BTV5 496 aa13.91□□□□□ -0.18
PCAT1-202ENST00000561978 GPR108Q9NPR9 543 aa13.91□□□□□ -0.18
PCAT1-202ENST00000561978 SLX4Q8IY92 1834 aa13.9□□□□□ -0.18
PCAT1-202ENST00000561978 DALRD3Q5D0E6 543 aaKnown RBP13.9□□□□□ -0.18
PCAT1-202ENST00000561978 TTLL6Q8N841 843 aa13.9□□□□□ -0.18
PCAT1-202ENST00000561978 UPF3BQ9BZI7 483 aaKnown RBP13.9□□□□□ -0.18
PCAT1-202ENST00000561978 GZF1Q9H116 711 aaPredicted RBP13.9□□□□□ -0.18
PCAT1-202ENST00000561978 A0A0U1RQG5 324 aaPredicted RBP13.89□□□□□ -0.19
PCAT1-202ENST00000561978 NPR1P16066 1061 aa13.89□□□□□ -0.19
PCAT1-202ENST00000561978 IL15P40933 162 aaPredicted RBP13.89□□□□□ -0.19
PCAT1-202ENST00000561978 TLR7Q9NYK1 1049 aaKnown RBP13.89□□□□□ -0.19
PCAT1-202ENST00000561978 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.89□□□□□ -0.19
PCAT1-202ENST00000561978 RIC1Q4ADV7 1423 aa13.89□□□□□ -0.19
PCAT1-202ENST00000561978 CCDC171Q6TFL3 1326 aa13.89□□□□□ -0.19
PCAT1-202ENST00000561978 MYH3P11055 1940 aa13.89□□□□□ -0.19
PCAT1-202ENST00000561978 RFX7Q2KHR2 1363 aa13.89□□□□□ -0.19
PCAT1-202ENST00000561978 FSD2A1L4K1 749 aa13.89□□□□□ -0.19
PCAT1-202ENST00000561978 RBM10P98175 930 aaKnown RBP13.89□□□□□ -0.19
PCAT1-202ENST00000561978 RNF20Q5VTR2 975 aa13.89□□□□□ -0.19
PCAT1-202ENST00000561978 PRPF40BQ6NWY9 871 aaKnown RBP13.89□□□□□ -0.19
PCAT1-202ENST00000561978 SLC51AQ86UW1 340 aa13.89□□□□□ -0.19
PCAT1-202ENST00000561978 MAP4K1Q92918 833 aa13.89□□□□□ -0.19
PCAT1-202ENST00000561978 LIMCH1Q9UPQ0 1083 aa13.89□□□□□ -0.19
PCAT1-202ENST00000561978 CHMP3Q9Y3E7 222 aa13.89□□□□□ -0.19
PCAT1-202ENST00000561978 CDHR2Q9BYE9 1310 aa13.88□□□□□ -0.19
PCAT1-202ENST00000561978 PDE8AO60658 829 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms