RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 MCM2P49736 904 aa20.59■□□□□ 0.89
HDDC3-206ENST00000561036 PTH1RQ03431 593 aa20.59■□□□□ 0.89
HDDC3-206ENST00000561036 CRY2Q49AN0 593 aa20.59■□□□□ 0.89
HDDC3-206ENST00000561036 COL23A1Q86Y22 540 aaPredicted RBP20.59■□□□□ 0.89
HDDC3-206ENST00000561036 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.59■□□□□ 0.89
HDDC3-206ENST00000561036 PALD1Q9ULE6 856 aa20.59■□□□□ 0.89
HDDC3-206ENST00000561036 A0A1B0GUL6 1792 aa20.59■□□□□ 0.89
HDDC3-206ENST00000561036 AKAP11Q9UKA4 1901 aa20.59■□□□□ 0.89
HDDC3-206ENST00000561036 DDR1Q08345 913 aa20.58■□□□□ 0.89
HDDC3-206ENST00000561036 NECTIN1Q15223 517 aa20.58■□□□□ 0.89
HDDC3-206ENST00000561036 ANTXR1Q9H6X2 564 aa20.58■□□□□ 0.89
HDDC3-206ENST00000561036 KLRG2A4D1S0 409 aaPredicted RBP20.57■□□□□ 0.88
HDDC3-206ENST00000561036 ZBTB22O15209 634 aa20.57■□□□□ 0.88
HDDC3-206ENST00000561036 GRAPQ13588 217 aa20.57■□□□□ 0.88
HDDC3-206ENST00000561036 RNF20Q5VTR2 975 aa20.57■□□□□ 0.88
HDDC3-206ENST00000561036 CCDC24Q8N4L8 307 aa20.57■□□□□ 0.88
HDDC3-206ENST00000561036 GRAPLQ8TC17 118 aaPredicted RBP20.57■□□□□ 0.88
HDDC3-206ENST00000561036 CAMKK2Q96RR4 588 aa20.57■□□□□ 0.88
HDDC3-206ENST00000561036 GNL3LQ9NVN8 582 aaKnown RBP20.57■□□□□ 0.88
HDDC3-206ENST00000561036 RBM8AQ9Y5S9 174 aaKnown RBP20.57■□□□□ 0.88
HDDC3-206ENST00000561036 SNX14Q9Y5W7 946 aa20.57■□□□□ 0.88
HDDC3-206ENST00000561036 ZNF804BA4D1E1 1349 aa20.56■□□□□ 0.88
HDDC3-206ENST00000561036 ZNF589Q86UQ0 364 aaPredicted RBP20.56■□□□□ 0.88
HDDC3-206ENST00000561036 SPATA5Q8NB90 893 aa20.56■□□□□ 0.88
HDDC3-206ENST00000561036 RPGRQ92834 1020 aaKnown RBP20.56■□□□□ 0.88
HDDC3-206ENST00000561036 TM6SF1Q9BZW5 370 aa20.56■□□□□ 0.88
HDDC3-206ENST00000561036 HMG20BQ9P0W2 317 aa20.56■□□□□ 0.88
HDDC3-206ENST00000561036 U3KPZ7 1027 aaPredicted RBP20.56■□□□□ 0.88
HDDC3-206ENST00000561036 CD2BP2O95400 341 aaKnown RBP20.55■□□□□ 0.88
HDDC3-206ENST00000561036 CYP2E1P05181 493 aaPredicted RBP20.55■□□□□ 0.88
HDDC3-206ENST00000561036 ZKSCAN1P17029 563 aaPredicted RBP20.55■□□□□ 0.88
HDDC3-206ENST00000561036 HOXA10P31260 410 aaPredicted RBP20.55■□□□□ 0.88
HDDC3-206ENST00000561036 KCNJ4P48050 445 aa20.55■□□□□ 0.88
HDDC3-206ENST00000561036 NEK4P51957 841 aa20.55■□□□□ 0.88
HDDC3-206ENST00000561036 RBM17Q96I25 401 aaKnown RBP20.55■□□□□ 0.88
HDDC3-206ENST00000561036 PNPLA7Q6ZV29 1317 aa20.54■□□□□ 0.88
HDDC3-206ENST00000561036 NRXN2Q9P2S2 1712 aa20.54■□□□□ 0.88
HDDC3-206ENST00000561036 TSGA10IPQ3SY00 556 aa20.54■□□□□ 0.88
HDDC3-206ENST00000561036 CAVIN4Q5BKX8 364 aa20.54■□□□□ 0.88
HDDC3-206ENST00000561036 CREB3L3Q68CJ9 461 aa20.54■□□□□ 0.88
HDDC3-206ENST00000561036 APPBP2Q92624 585 aa20.54■□□□□ 0.88
HDDC3-206ENST00000561036 DSCC1Q9BVC3 393 aa20.54■□□□□ 0.88
HDDC3-206ENST00000561036 TAF1P21675 1872 aa20.54■□□□□ 0.88
HDDC3-206ENST00000561036 SNAP23O00161 211 aa20.53■□□□□ 0.88
HDDC3-206ENST00000561036 SEMA3EO15041 775 aa20.53■□□□□ 0.88
HDDC3-206ENST00000561036 BCAMP50895 628 aa20.53■□□□□ 0.88
HDDC3-206ENST00000561036 RASGRF1Q13972 1273 aa20.53■□□□□ 0.88
HDDC3-206ENST00000561036 UBE3CQ15386 1083 aa20.53■□□□□ 0.88
HDDC3-206ENST00000561036 PRPF40BQ6NWY9 871 aaKnown RBP20.53■□□□□ 0.88
HDDC3-206ENST00000561036 PI16Q6UXB8 463 aa20.53■□□□□ 0.88
HDDC3-206ENST00000561036 RASEFQ8IZ41 740 aa20.53■□□□□ 0.88
HDDC3-206ENST00000561036 CRAMP1Q96RY5 1269 aa20.53■□□□□ 0.88
HDDC3-206ENST00000561036 SLC27A2O14975 620 aa20.52■□□□□ 0.88
HDDC3-206ENST00000561036 BBOX1O75936 387 aa20.52■□□□□ 0.88
HDDC3-206ENST00000561036 ADD2P35612 726 aa20.52■□□□□ 0.88
HDDC3-206ENST00000561036 TMC4Q7Z404 712 aa20.52■□□□□ 0.88
HDDC3-206ENST00000561036 FBXO33Q7Z6M2 555 aa20.52■□□□□ 0.88
HDDC3-206ENST00000561036 SEC62Q99442 399 aaKnown RBP20.52■□□□□ 0.88
HDDC3-206ENST00000561036 BRIP1Q9BX63 1249 aa20.52■□□□□ 0.88
HDDC3-206ENST00000561036 STK32BQ9NY57 414 aa20.52■□□□□ 0.88
HDDC3-206ENST00000561036 LEMD3Q9Y2U8 911 aa20.52■□□□□ 0.88
HDDC3-206ENST00000561036 QSER1Q2KHR3 1735 aa20.52■□□□□ 0.88
HDDC3-206ENST00000561036 MAST3O60307 1309 aa20.52■□□□□ 0.87
HDDC3-206ENST00000561036 MYH7P12883 1935 aa20.51■□□□□ 0.87
HDDC3-206ENST00000561036 PSMA5P28066 241 aa20.51■□□□□ 0.87
HDDC3-206ENST00000561036 SF3B2Q13435 895 aaKnown RBP20.51■□□□□ 0.87
HDDC3-206ENST00000561036 KRT32Q14532 448 aa20.51■□□□□ 0.87
HDDC3-206ENST00000561036 EZH2Q15910 746 aaKnown RBP20.51■□□□□ 0.87
HDDC3-206ENST00000561036 SLC15A2Q16348 729 aa20.51■□□□□ 0.87
HDDC3-206ENST00000561036 PIH1D3Q9NQM4 214 aaKnown RBP20.51■□□□□ 0.87
HDDC3-206ENST00000561036 PDS5AQ29RF7 1337 aaKnown RBP20.51■□□□□ 0.87
HDDC3-206ENST00000561036 BAG6P46379 1132 aa20.5■□□□□ 0.87
HDDC3-206ENST00000561036 EN1Q05925 392 aaPredicted RBP20.5■□□□□ 0.87
HDDC3-206ENST00000561036 MAP3K12Q12852 859 aa20.5■□□□□ 0.87
HDDC3-206ENST00000561036 OSBP2Q969R2 916 aa20.5■□□□□ 0.87
HDDC3-206ENST00000561036 ZSWIM6Q9HCJ5 1215 aa20.5■□□□□ 0.87
HDDC3-206ENST00000561036 DENND2AQ9ULE3 1009 aa20.5■□□□□ 0.87
HDDC3-206ENST00000561036 PARP3Q9Y6F1 533 aa20.5■□□□□ 0.87
HDDC3-206ENST00000561036 CHGBP05060 677 aa20.49■□□□□ 0.87
HDDC3-206ENST00000561036 WASHC4Q2M389 1173 aa20.49■□□□□ 0.87
HDDC3-206ENST00000561036 SLC9C2Q5TAH2 1124 aa20.49■□□□□ 0.87
HDDC3-206ENST00000561036 CCDC129Q6ZRS4 1044 aa20.49■□□□□ 0.87
HDDC3-206ENST00000561036 VPS37DQ86XT2 251 aa20.49■□□□□ 0.87
HDDC3-206ENST00000561036 FAM84BQ96KN1 310 aaPredicted RBP20.49■□□□□ 0.87
HDDC3-206ENST00000561036 CIZ1Q9ULV3 898 aaPredicted RBP20.49■□□□□ 0.87
HDDC3-206ENST00000561036 EP400Q96L91 3159 aa20.49■□□□□ 0.87
HDDC3-206ENST00000561036 XDHP47989 1333 aa20.49■□□□□ 0.87
HDDC3-206ENST00000561036 DOCK2Q92608 1830 aa20.48■□□□□ 0.87
HDDC3-206ENST00000561036 M0R2C6 588 aa20.48■□□□□ 0.87
HDDC3-206ENST00000561036 IDH1O75874 414 aaKnown RBP20.48■□□□□ 0.87
HDDC3-206ENST00000561036 HSP90AA1P07900 732 aaKnown RBP20.48■□□□□ 0.87
HDDC3-206ENST00000561036 PDE6AP16499 860 aa20.48■□□□□ 0.87
HDDC3-206ENST00000561036 C15orf52Q6ZUT6 534 aaKnown RBP20.48■□□□□ 0.87
HDDC3-206ENST00000561036 SLKQ9H2G2 1235 aaPredicted RBP20.48■□□□□ 0.87
HDDC3-206ENST00000561036 CHMP5Q9NZZ3 219 aa20.48■□□□□ 0.87
HDDC3-206ENST00000561036 CYP46A1Q9Y6A2 500 aa20.48■□□□□ 0.87
HDDC3-206ENST00000561036 RPAP1Q9BWH6 1393 aaPredicted RBP20.47■□□□□ 0.87
HDDC3-206ENST00000561036 IGSF3O75054 1194 aa20.47■□□□□ 0.87
HDDC3-206ENST00000561036 MMP10P09238 476 aa20.47■□□□□ 0.87
HDDC3-206ENST00000561036 HSPD1P10809 573 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms