RNA–Protein interactions for RNA: ENST00000560997.1

SNX22-206, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 3,367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-206ENST00000560997 CCDC85AQ96PX6 553 aaPredicted RBP11.53□□□□□ -0.56
SNX22-206ENST00000560997 PRDM11Q9NQV5 511 aa11.53□□□□□ -0.56
SNX22-206ENST00000560997 WDR17Q8IZU2 1322 aa11.53□□□□□ -0.56
SNX22-206ENST00000560997 CCDC191Q8NCU4 936 aa11.53□□□□□ -0.56
SNX22-206ENST00000560997 SPTLC3Q9NUV7 552 aa11.53□□□□□ -0.56
SNX22-206ENST00000560997 ZNF330Q9Y3S2 320 aaPredicted RBP11.53□□□□□ -0.56
SNX22-206ENST00000560997 DYNC1I1O14576 645 aa11.52□□□□□ -0.56
SNX22-206ENST00000560997 RNF113AO15541 343 aaKnown RBP11.52□□□□□ -0.56
SNX22-206ENST00000560997 HMGB1P09429 215 aaKnown RBP11.52□□□□□ -0.56
SNX22-206ENST00000560997 MYH15Q9Y2K3 1946 aa11.52□□□□□ -0.57
SNX22-206ENST00000560997 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.52□□□□□ -0.57
SNX22-206ENST00000560997 PTGS1P23219 599 aa11.52□□□□□ -0.57
SNX22-206ENST00000560997 ADORA1P30542 326 aa11.52□□□□□ -0.57
SNX22-206ENST00000560997 GUCY1B3Q02153 619 aa11.52□□□□□ -0.57
SNX22-206ENST00000560997 FKBP4Q02790 459 aaKnown RBP eCLIP11.52□□□□□ -0.57
SNX22-206ENST00000560997 TSC1Q92574 1164 aa11.52□□□□□ -0.57
SNX22-206ENST00000560997 OSBP2Q969R2 916 aa11.52□□□□□ -0.57
SNX22-206ENST00000560997 DNAJC25Q9H1X3 360 aa11.52□□□□□ -0.57
SNX22-206ENST00000560997 ZSCAN16Q9H4T2 348 aaPredicted RBP11.52□□□□□ -0.57
SNX22-206ENST00000560997 GPHNQ9NQX3 736 aaPredicted RBP11.52□□□□□ -0.57
SNX22-206ENST00000560997 KIAA1524Q8TCG1 905 aa11.51□□□□□ -0.57
SNX22-206ENST00000560997 LLPHQ9BRT6 129 aaKnown RBP11.51□□□□□ -0.57
SNX22-206ENST00000560997 AGXT2Q9BYV1 514 aa11.51□□□□□ -0.57
SNX22-206ENST00000560997 ERVV-2B6SEH9 535 aa11.51□□□□□ -0.57
SNX22-206ENST00000560997 HSP90AB3PQ58FF7 597 aa11.51□□□□□ -0.57
SNX22-206ENST00000560997 MYRIPQ8NFW9 859 aa11.51□□□□□ -0.57
SNX22-206ENST00000560997 GOLPH3LQ9H4A5 285 aa11.51□□□□□ -0.57
SNX22-206ENST00000560997 PAPPAQ13219 1627 aa11.5□□□□□ -0.57
SNX22-206ENST00000560997 FOXP2O15409 715 aa11.5□□□□□ -0.57
SNX22-206ENST00000560997 PDIA3P30101 505 aaKnown RBP11.5□□□□□ -0.57
SNX22-206ENST00000560997 HAND2P61296 217 aa11.5□□□□□ -0.57
SNX22-206ENST00000560997 SCARF1Q14162 830 aa11.5□□□□□ -0.57
SNX22-206ENST00000560997 NAA16Q6N069 864 aaPredicted RBP11.5□□□□□ -0.57
SNX22-206ENST00000560997 USP28Q96RU2 1077 aa11.5□□□□□ -0.57
SNX22-206ENST00000560997 CFAP45Q9UL16 551 aa11.5□□□□□ -0.57
SNX22-206ENST00000560997 SALL1Q9NSC2 1324 aa11.5□□□□□ -0.57
SNX22-206ENST00000560997 CIAO1O76071 339 aa11.5□□□□□ -0.57
SNX22-206ENST00000560997 MYCNP04198 464 aaPredicted RBP11.5□□□□□ -0.57
SNX22-206ENST00000560997 ZNF165P49910 485 aa11.5□□□□□ -0.57
SNX22-206ENST00000560997 BRINP3Q76B58 766 aa11.5□□□□□ -0.57
SNX22-206ENST00000560997 CEP126Q9P2H0 1117 aa11.5□□□□□ -0.57
SNX22-206ENST00000560997 NRBP1Q9UHY1 535 aa11.5□□□□□ -0.57
SNX22-206ENST00000560997 A0A087WWV3 80 aa11.5□□□□□ -0.57
SNX22-206ENST00000560997 PI16Q6UXB8 463 aa11.5□□□□□ -0.57
SNX22-206ENST00000560997 ILDR1Q86SU0 546 aaPredicted RBP11.5□□□□□ -0.57
SNX22-206ENST00000560997 TDRD7Q8NHU6 1098 aaKnown RBP11.5□□□□□ -0.57
SNX22-206ENST00000560997 NWD2Q9ULI1 1742 aa11.5□□□□□ -0.57
SNX22-206ENST00000560997 HMGN5P82970 282 aaKnown RBP11.49□□□□□ -0.57
SNX22-206ENST00000560997 CCAR1Q8IX12 1150 aaKnown RBP11.49□□□□□ -0.57
SNX22-206ENST00000560997 FAM89AQ96GI7 184 aa11.49□□□□□ -0.57
SNX22-206ENST00000560997 XAGE2Q96GT9 111 aa11.49□□□□□ -0.57
SNX22-206ENST00000560997 ISCA1Q9BUE6 129 aa11.49□□□□□ -0.57
SNX22-206ENST00000560997 COL5A2P05997 1499 aaPredicted RBP11.49□□□□□ -0.57
SNX22-206ENST00000560997 SHANK3Q9BYB0 1731 aa11.49□□□□□ -0.57
SNX22-206ENST00000560997 GOLGA6L6A8MZA4 724 aa11.49□□□□□ -0.57
SNX22-206ENST00000560997 LRMPQ12912 555 aa11.49□□□□□ -0.57
SNX22-206ENST00000560997 NKX1-1Q15270 411 aaPredicted RBP11.49□□□□□ -0.57
SNX22-206ENST00000560997 WASHC4Q2M389 1173 aa11.49□□□□□ -0.57
SNX22-206ENST00000560997 CCDC57Q2TAC2 916 aa11.49□□□□□ -0.57
SNX22-206ENST00000560997 TTC39AQ5SRH9 613 aa11.49□□□□□ -0.57
SNX22-206ENST00000560997 C11orf57Q6ZUT1 292 aaPredicted RBP11.49□□□□□ -0.57
SNX22-206ENST00000560997 CCDC186Q7Z3E2 898 aa11.49□□□□□ -0.57
SNX22-206ENST00000560997 ARID3AQ99856 593 aa11.49□□□□□ -0.57
SNX22-206ENST00000560997 TRIM5Q9C035 493 aa11.49□□□□□ -0.57
SNX22-206ENST00000560997 STRN4Q9NRL3 753 aa11.49□□□□□ -0.57
SNX22-206ENST00000560997 RCOR1Q9UKL0 485 aa11.49□□□□□ -0.57
SNX22-206ENST00000560997 TNS2Q63HR2 1409 aa11.49□□□□□ -0.57
SNX22-206ENST00000560997 FAM177BA6PVY3 158 aa11.48□□□□□ -0.57
SNX22-206ENST00000560997 IL2RBP14784 551 aa11.48□□□□□ -0.57
SNX22-206ENST00000560997 ZNF75DP51815 510 aa11.48□□□□□ -0.57
SNX22-206ENST00000560997 GORABQ5T7V8 394 aa11.48□□□□□ -0.57
SNX22-206ENST00000560997 PLA2G4DQ86XP0 818 aa11.48□□□□□ -0.57
SNX22-206ENST00000560997 SYNE4Q8N205 404 aa11.48□□□□□ -0.57
SNX22-206ENST00000560997 ATG3Q9NT62 314 aa11.48□□□□□ -0.57
SNX22-206ENST00000560997 CARMIL3Q8ND23 1372 aa11.48□□□□□ -0.57
SNX22-206ENST00000560997 SPEF2Q9C093 1822 aa11.48□□□□□ -0.57
SNX22-206ENST00000560997 FDPSP14324 419 aaKnown RBP11.48□□□□□ -0.57
SNX22-206ENST00000560997 GLIPR1L2Q4G1C9 344 aa11.48□□□□□ -0.57
SNX22-206ENST00000560997 OTUD7BQ6GQQ9 843 aa11.48□□□□□ -0.57
SNX22-206ENST00000560997 RAB11FIP4Q86YS3 637 aa11.48□□□□□ -0.57
SNX22-206ENST00000560997 DRC7Q8IY82 874 aa11.48□□□□□ -0.57
SNX22-206ENST00000560997 PRIMPOLQ96LW4 560 aa11.48□□□□□ -0.57
SNX22-206ENST00000560997 TPM3P06753 285 aa11.48□□□□□ -0.57
SNX22-206ENST00000560997 ZAP70P43403 619 aa11.48□□□□□ -0.57
SNX22-206ENST00000560997 TCIRG1Q13488 830 aa11.48□□□□□ -0.57
SNX22-206ENST00000560997 SNW1Q13573 536 aaKnown RBP11.48□□□□□ -0.57
SNX22-206ENST00000560997 ZNF274Q96GC6 653 aaPredicted RBP11.48□□□□□ -0.57
SNX22-206ENST00000560997 TOGARAM1Q9Y4F4 1720 aa11.47□□□□□ -0.57
SNX22-206ENST00000560997 HSPA2P54652 639 aa11.47□□□□□ -0.57
SNX22-206ENST00000560997 CCDC158Q5M9N0 1113 aa11.47□□□□□ -0.57
SNX22-206ENST00000560997 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.47□□□□□ -0.57
SNX22-206ENST00000560997 ERCC4Q92889 916 aaPredicted RBP11.47□□□□□ -0.57
SNX22-206ENST00000560997 PUS7LQ9H0K6 701 aaKnown RBP11.47□□□□□ -0.57
SNX22-206ENST00000560997 XIRP1Q702N8 1843 aaKnown RBP11.47□□□□□ -0.57
SNX22-206ENST00000560997 FGAP02671 866 aa11.47□□□□□ -0.57
SNX22-206ENST00000560997 KIF3AQ9Y496 699 aa11.47□□□□□ -0.57
SNX22-206ENST00000560997 ME1P48163 572 aa11.46□□□□□ -0.57
SNX22-206ENST00000560997 IQCB1Q15051 598 aa11.46□□□□□ -0.57
SNX22-206ENST00000560997 DNAJC10Q8IXB1 793 aa11.46□□□□□ -0.57
SNX22-206ENST00000560997 ASAP1Q9ULH1 1129 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms