RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 PHKA1P46020 1223 aa15.49■□□□□ 0.07
SNX1-211ENST00000560829 TTF1Q15361 905 aaPredicted RBP15.49■□□□□ 0.07
SNX1-211ENST00000560829 ZSWIM6Q9HCJ5 1215 aa15.49■□□□□ 0.07
SNX1-211ENST00000560829 U3KPZ7 1027 aaPredicted RBP15.49■□□□□ 0.07
SNX1-211ENST00000560829 EP400Q96L91 3159 aa15.49■□□□□ 0.07
SNX1-211ENST00000560829 COL4A1P02462 1669 aa15.49■□□□□ 0.07
SNX1-211ENST00000560829 RPAP1Q9BWH6 1393 aaPredicted RBP15.49■□□□□ 0.07
SNX1-211ENST00000560829 GYS1P13807 737 aa15.48■□□□□ 0.07
SNX1-211ENST00000560829 KCNJ4P48050 445 aa15.48■□□□□ 0.07
SNX1-211ENST00000560829 CUL4AQ13619 759 aa15.48■□□□□ 0.07
SNX1-211ENST00000560829 TMX3Q96JJ7 454 aa15.48■□□□□ 0.07
SNX1-211ENST00000560829 DSCC1Q9BVC3 393 aa15.48■□□□□ 0.07
SNX1-211ENST00000560829 MAST3O60307 1309 aa15.48■□□□□ 0.07
SNX1-211ENST00000560829 PI16Q6UXB8 463 aa15.48■□□□□ 0.07
SNX1-211ENST00000560829 CELF1Q92879 486 aaKnown RBP15.48■□□□□ 0.07
SNX1-211ENST00000560829 CWC22Q9HCG8 908 aaKnown RBP15.48■□□□□ 0.07
SNX1-211ENST00000560829 UBR3Q6ZT12 1888 aa15.48■□□□□ 0.07
SNX1-211ENST00000560829 CYP2E1P05181 493 aaPredicted RBP15.47■□□□□ 0.07
SNX1-211ENST00000560829 TM4SF1P30408 202 aa15.47■□□□□ 0.07
SNX1-211ENST00000560829 UBE4AQ14139 1066 aa15.47■□□□□ 0.07
SNX1-211ENST00000560829 ADCK5Q3MIX3 580 aa15.47■□□□□ 0.07
SNX1-211ENST00000560829 ZSCAN25Q6NSZ9 544 aa15.47■□□□□ 0.07
SNX1-211ENST00000560829 CCDC129Q6ZRS4 1044 aa15.47■□□□□ 0.07
SNX1-211ENST00000560829 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.47■□□□□ 0.072e-6■■□□□ 13.8
SNX1-211ENST00000560829 MINPP1Q9UNW1 487 aa15.47■□□□□ 0.07
SNX1-211ENST00000560829 PSMA5P28066 241 aa15.46■□□□□ 0.07
SNX1-211ENST00000560829 RPS8P62241 208 aaKnown RBP15.46■□□□□ 0.07
SNX1-211ENST00000560829 VPS53Q5VIR6 699 aa15.46■□□□□ 0.07
SNX1-211ENST00000560829 APPBP2Q92624 585 aa15.46■□□□□ 0.07
SNX1-211ENST00000560829 OSBP2Q969R2 916 aa15.46■□□□□ 0.07
SNX1-211ENST00000560829 INTS4Q96HW7 963 aaKnown RBP15.46■□□□□ 0.07
SNX1-211ENST00000560829 JAKMIP1Q96N16 626 aaKnown RBP15.46■□□□□ 0.07
SNX1-211ENST00000560829 SNAP23O00161 211 aa15.46■□□□□ 0.06
SNX1-211ENST00000560829 CASTP20810 708 aaKnown RBP15.46■□□□□ 0.06
SNX1-211ENST00000560829 SLFNL1Q499Z3 407 aa15.46■□□□□ 0.06
SNX1-211ENST00000560829 CNBD1Q8NA66 436 aa15.46■□□□□ 0.06
SNX1-211ENST00000560829 ZNF804BA4D1E1 1349 aa15.46■□□□□ 0.06
SNX1-211ENST00000560829 KRT32Q14532 448 aa15.45■□□□□ 0.06
SNX1-211ENST00000560829 RAB3GAP1Q15042 981 aa15.45■□□□□ 0.06
SNX1-211ENST00000560829 UBE3CQ15386 1083 aa15.45■□□□□ 0.06
SNX1-211ENST00000560829 RUFY3Q7L099 469 aa15.45■□□□□ 0.06
SNX1-211ENST00000560829 SPATA5Q8NB90 893 aa15.45■□□□□ 0.06
SNX1-211ENST00000560829 CYP46A1Q9Y6A2 500 aa15.45■□□□□ 0.06
SNX1-211ENST00000560829 FRAT2O75474 233 aaPredicted RBP15.44■□□□□ 0.06
SNX1-211ENST00000560829 ADD2P35612 726 aa15.44■□□□□ 0.06
SNX1-211ENST00000560829 AK2P54819 239 aa15.44■□□□□ 0.06
SNX1-211ENST00000560829 RASGRF1Q13972 1273 aa15.44■□□□□ 0.06
SNX1-211ENST00000560829 PRR5LQ6MZQ0 368 aa15.44■□□□□ 0.06
SNX1-211ENST00000560829 AKT1S1Q96B36 256 aa15.44■□□□□ 0.06
SNX1-211ENST00000560829 ALDH8A1Q9H2A2 487 aaPredicted RBP15.44■□□□□ 0.06
SNX1-211ENST00000560829 PIH1D3Q9NQM4 214 aaKnown RBP15.44■□□□□ 0.06
SNX1-211ENST00000560829 FOXD4L1Q9NU39 408 aa15.44■□□□□ 0.06
SNX1-211ENST00000560829 RGS17Q9UGC6 210 aaPredicted RBP15.44■□□□□ 0.06
SNX1-211ENST00000560829 M0R2C6 588 aa15.44■□□□□ 0.06
SNX1-211ENST00000560829 APBA3O96018 575 aa15.44■□□□□ 0.06
SNX1-211ENST00000560829 HSPD1P10809 573 aaKnown RBP15.44■□□□□ 0.06
SNX1-211ENST00000560829 AKAP11Q9UKA4 1901 aa15.43■□□□□ 0.06
SNX1-211ENST00000560829 ZBTB22O15209 634 aa15.43■□□□□ 0.06
SNX1-211ENST00000560829 BCAMP50895 628 aa15.43■□□□□ 0.06
SNX1-211ENST00000560829 CCDC24Q8N4L8 307 aa15.43■□□□□ 0.06
SNX1-211ENST00000560829 ANKRD2Q9GZV1 360 aa15.43■□□□□ 0.06
SNX1-211ENST00000560829 PDRG1Q9NUG6 133 aa15.43■□□□□ 0.06
SNX1-211ENST00000560829 LIMCH1Q9UPQ0 1083 aa15.43■□□□□ 0.06
SNX1-211ENST00000560829 TNRC6CQ9HCJ0 1690 aaKnown RBP15.42■□□□□ 0.06
SNX1-211ENST00000560829 NPHP1O15259 732 aa15.42■□□□□ 0.06
SNX1-211ENST00000560829 SERPINB2P05120 415 aa15.42■□□□□ 0.06
SNX1-211ENST00000560829 CYP21A2P08686 494 aa15.42■□□□□ 0.06
SNX1-211ENST00000560829 WASHC4Q2M389 1173 aa15.42■□□□□ 0.06
SNX1-211ENST00000560829 CRY2Q49AN0 593 aa15.42■□□□□ 0.06
SNX1-211ENST00000560829 TAF6LQ9Y6J9 622 aa15.42■□□□□ 0.06
SNX1-211ENST00000560829 NUCB2P80303 420 aa15.42■□□□□ 0.06
SNX1-211ENST00000560829 ZNF827Q17R98 1081 aa15.42■□□□□ 0.06
SNX1-211ENST00000560829 SLC9C2Q5TAH2 1124 aa15.42■□□□□ 0.06
SNX1-211ENST00000560829 ZGPATQ8N5A5 531 aaKnown RBP15.42■□□□□ 0.06
SNX1-211ENST00000560829 PUS7LQ9H0K6 701 aaKnown RBP15.42■□□□□ 0.06
SNX1-211ENST00000560829 TCRBV5S4A2TA0A5A2 114 aa15.41■□□□□ 0.06
SNX1-211ENST00000560829 CPA1P15085 419 aa15.41■□□□□ 0.06
SNX1-211ENST00000560829 PDE6AP16499 860 aa15.41■□□□□ 0.06
SNX1-211ENST00000560829 RPS6KB1P23443 525 aa15.41■□□□□ 0.06
SNX1-211ENST00000560829 ST5P78524 1137 aa15.41■□□□□ 0.06
SNX1-211ENST00000560829 GRAPQ13588 217 aa15.41■□□□□ 0.06
SNX1-211ENST00000560829 BLOC1S2Q6QNY1 142 aa15.41■□□□□ 0.06
SNX1-211ENST00000560829 GRAPLQ8TC17 118 aaPredicted RBP15.41■□□□□ 0.06
SNX1-211ENST00000560829 POLRMTO00411 1230 aaKnown RBP15.4■□□□□ 0.06
SNX1-211ENST00000560829 FOXP2O15409 715 aa15.4■□□□□ 0.06
SNX1-211ENST00000560829 IDH1O75874 414 aaKnown RBP15.4■□□□□ 0.06
SNX1-211ENST00000560829 DDR1Q08345 913 aa15.4■□□□□ 0.06
SNX1-211ENST00000560829 FLAD1Q8NFF5 587 aa15.4■□□□□ 0.06
SNX1-211ENST00000560829 ZSCAN31Q96LW9 406 aaPredicted RBP15.4■□□□□ 0.06
SNX1-211ENST00000560829 GNL3LQ9NVN8 582 aaKnown RBP15.4■□□□□ 0.06
SNX1-211ENST00000560829 A0A1B0GUL6 1792 aa15.4■□□□□ 0.06
SNX1-211ENST00000560829 CASZ1Q86V15 1759 aa15.4■□□□□ 0.06
SNX1-211ENST00000560829 KLRG2A4D1S0 409 aaPredicted RBP15.4■□□□□ 0.06
SNX1-211ENST00000560829 MAP3K12Q12852 859 aa15.4■□□□□ 0.06
SNX1-211ENST00000560829 ANKRD1Q15327 319 aa15.4■□□□□ 0.06
SNX1-211ENST00000560829 CAVIN4Q5BKX8 364 aa15.4■□□□□ 0.06
SNX1-211ENST00000560829 POTEAQ6S8J7 498 aa15.4■□□□□ 0.06
SNX1-211ENST00000560829 CLEC17AQ6ZS10 378 aa15.4■□□□□ 0.06
SNX1-211ENST00000560829 FBXO33Q7Z6M2 555 aa15.4■□□□□ 0.06
SNX1-211ENST00000560829 TNPO1Q92973 898 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms