RNA–Protein interactions for RNA: ENST00000560336.6

LINC00520-206, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 883 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-206ENST00000560336 USP17L10C9JJH3 530 aa10.46□□□□□ -0.73
LINC00520-206ENST00000560336 USP17L13C9JLJ4 530 aa10.46□□□□□ -0.73
LINC00520-206ENST00000560336 USP17L12C9JPN9 530 aa10.46□□□□□ -0.73
LINC00520-206ENST00000560336 USP17L11C9JVI0 530 aa10.46□□□□□ -0.73
LINC00520-206ENST00000560336 USP17L21D6R901 530 aa10.46□□□□□ -0.73
LINC00520-206ENST00000560336 USP17L18D6R9N7 530 aa10.46□□□□□ -0.73
LINC00520-206ENST00000560336 USP17L22D6RA61 530 aa10.46□□□□□ -0.73
LINC00520-206ENST00000560336 USP17L17D6RBQ6 530 aa10.46□□□□□ -0.73
LINC00520-206ENST00000560336 USP17L19D6RCP7 530 aa10.46□□□□□ -0.73
LINC00520-206ENST00000560336 USP17L20D6RJB6 530 aa10.46□□□□□ -0.73
LINC00520-206ENST00000560336 SEC13P55735 322 aa10.46□□□□□ -0.73
LINC00520-206ENST00000560336 USP17L24Q0WX57 530 aa10.46□□□□□ -0.73
LINC00520-206ENST00000560336 LBRQ14739 615 aaKnown RBP10.46□□□□□ -0.73
LINC00520-206ENST00000560336 EFHC2Q5JST6 749 aa10.46□□□□□ -0.73
LINC00520-206ENST00000560336 C1orf216Q8TAB5 229 aa10.46□□□□□ -0.73
LINC00520-206ENST00000560336 CRISPLD1Q9H336 500 aa10.46□□□□□ -0.73
LINC00520-206ENST00000560336 A0A1W2PP64 1363 aa10.46□□□□□ -0.74
LINC00520-206ENST00000560336 PPIP5K1Q6PFW1 1433 aa10.46□□□□□ -0.74
LINC00520-206ENST00000560336 NWD1Q149M9 1564 aa10.46□□□□□ -0.74
LINC00520-206ENST00000560336 SHPRHQ149N8 1683 aa10.45□□□□□ -0.74
LINC00520-206ENST00000560336 NRKQ7Z2Y5 1582 aa10.45□□□□□ -0.74
LINC00520-206ENST00000560336 CD163L1Q9NR16 1453 aa10.45□□□□□ -0.74
LINC00520-206ENST00000560336 CGNL1Q0VF96 1302 aa10.45□□□□□ -0.74
LINC00520-206ENST00000560336 FAM196BA6NMK8 535 aa10.45□□□□□ -0.74
LINC00520-206ENST00000560336 NOS2P35228 1153 aa10.45□□□□□ -0.74
LINC00520-206ENST00000560336 HNRNPUQ00839 825 aaKnown RBP eCLIP10.45□□□□□ -0.74
LINC00520-206ENST00000560336 DPYDQ12882 1025 aa10.45□□□□□ -0.74
LINC00520-206ENST00000560336 UBAP2LQ14157 1087 aaKnown RBP10.45□□□□□ -0.74
LINC00520-206ENST00000560336 TEAD4Q15561 434 aa10.45□□□□□ -0.74
LINC00520-206ENST00000560336 ZNF232Q9UNY5 417 aa10.45□□□□□ -0.74
LINC00520-206ENST00000560336 ADAMTS2O95450 1211 aa10.44□□□□□ -0.74
LINC00520-206ENST00000560336 TATP17735 454 aaPredicted RBP10.44□□□□□ -0.74
LINC00520-206ENST00000560336 TXLNAP40222 546 aa10.44□□□□□ -0.74
LINC00520-206ENST00000560336 ARSJQ5FYB0 599 aaPredicted RBP10.44□□□□□ -0.74
LINC00520-206ENST00000560336 ANKMY2Q8IV38 441 aa10.44□□□□□ -0.74
LINC00520-206ENST00000560336 MBIPQ9NS73 344 aa10.44□□□□□ -0.74
LINC00520-206ENST00000560336 ZDHHC3Q9NYG2 299 aa10.44□□□□□ -0.74
LINC00520-206ENST00000560336 XIRP1Q702N8 1843 aaKnown RBP10.44□□□□□ -0.74
LINC00520-206ENST00000560336 NSD2O96028 1365 aa10.43□□□□□ -0.74
LINC00520-206ENST00000560336 SERTM1A2A2V5 107 aa10.43□□□□□ -0.74
LINC00520-206ENST00000560336 SLURP2P0DP57 97 aa10.43□□□□□ -0.74
LINC00520-206ENST00000560336 PPP2R1AP30153 589 aa10.43□□□□□ -0.74
LINC00520-206ENST00000560336 SRSF11Q05519 484 aaKnown RBP10.43□□□□□ -0.74
LINC00520-206ENST00000560336 SH3PXD2AQ5TCZ1 1133 aa10.43□□□□□ -0.74
LINC00520-206ENST00000560336 MORC1Q86VD1 984 aa10.43□□□□□ -0.74
LINC00520-206ENST00000560336 NUDT16Q96DE0 195 aaKnown RBP10.43□□□□□ -0.74
LINC00520-206ENST00000560336 A0A1W2PNR3 127 aa10.42□□□□□ -0.74
LINC00520-206ENST00000560336 LGR5O75473 907 aa10.42□□□□□ -0.74
LINC00520-206ENST00000560336 KCNA6P17658 529 aa10.42□□□□□ -0.74
LINC00520-206ENST00000560336 WHAMMQ8TF30 809 aa10.42□□□□□ -0.74
LINC00520-206ENST00000560336 HINFPQ9BQA5 517 aa10.42□□□□□ -0.74
LINC00520-206ENST00000560336 CFHR5Q9BXR6 569 aa10.42□□□□□ -0.74
LINC00520-206ENST00000560336 FAM181BA6NEQ2 426 aa10.41□□□□□ -0.74
LINC00520-206ENST00000560336 MX2P20592 715 aa10.41□□□□□ -0.74
LINC00520-206ENST00000560336 PSMA6P60900 246 aaKnown RBP10.41□□□□□ -0.74
LINC00520-206ENST00000560336 C14orf37Q86TY3 774 aa10.41□□□□□ -0.74
LINC00520-206ENST00000560336 PNISRQ8TF01 805 aaKnown RBP10.41□□□□□ -0.74
LINC00520-206ENST00000560336 ABHD17AQ96GS6 310 aa10.41□□□□□ -0.74
LINC00520-206ENST00000560336 ARXQ96QS3 562 aa10.41□□□□□ -0.74
LINC00520-206ENST00000560336 ZIC5Q96T25 663 aa10.41□□□□□ -0.74
LINC00520-206ENST00000560336 ZCCHC2Q9C0B9 1178 aaKnown RBP10.41□□□□□ -0.74
LINC00520-206ENST00000560336 EML1O00423 815 aa10.4□□□□□ -0.74
LINC00520-206ENST00000560336 C21orf2O43822 256 aa10.4□□□□□ -0.74
LINC00520-206ENST00000560336 PPP1R12BO60237 982 aaPredicted RBP10.4□□□□□ -0.74
LINC00520-206ENST00000560336 BNIP3LO60238 219 aa10.4□□□□□ -0.74
LINC00520-206ENST00000560336 ZNF385CQ66K41 422 aaPredicted RBP10.4□□□□□ -0.74
LINC00520-206ENST00000560336 BICDL1Q6ZP65 573 aa10.4□□□□□ -0.74
LINC00520-206ENST00000560336 NLRP8Q86W28 1048 aa10.4□□□□□ -0.74
LINC00520-206ENST00000560336 PHF24Q9UPV7 400 aa10.4□□□□□ -0.74
LINC00520-206ENST00000560336 EDC4Q6P2E9 1401 aaKnown RBP10.4□□□□□ -0.75
LINC00520-206ENST00000560336 TNNT2P45379 298 aaPredicted RBP10.39□□□□□ -0.75
LINC00520-206ENST00000560336 WDR43Q15061 677 aaKnown RBP eCLIP10.39□□□□□ -0.75
LINC00520-206ENST00000560336 SCG3Q8WXD2 468 aaKnown RBP10.39□□□□□ -0.75
LINC00520-206ENST00000560336 NDFIP2Q9NV92 336 aa10.39□□□□□ -0.75
LINC00520-206ENST00000560336 CHMP3Q9Y3E7 222 aa10.39□□□□□ -0.75
LINC00520-206ENST00000560336 HCN4Q9Y3Q4 1203 aa10.39□□□□□ -0.75
LINC00520-206ENST00000560336 CPSF1Q10570 1443 aaKnown RBP10.39□□□□□ -0.75
LINC00520-206ENST00000560336 LTN1O94822 1766 aa10.39□□□□□ -0.75
LINC00520-206ENST00000560336 MARF1Q9Y4F3 1742 aaKnown RBP10.38□□□□□ -0.75
LINC00520-206ENST00000560336 PRR36Q9H6K5 1346 aa10.38□□□□□ -0.75
LINC00520-206ENST00000560336 KIF1AQ12756 1690 aa10.38□□□□□ -0.75
LINC00520-206ENST00000560336 NKTRP30414 1462 aaKnown RBP10.38□□□□□ -0.75
LINC00520-206ENST00000560336 LMTK3Q96Q04 1460 aa10.38□□□□□ -0.75
LINC00520-206ENST00000560336 FIGNL1Q6PIW4 674 aa10.38□□□□□ -0.75
LINC00520-206ENST00000560336 SVOPQ8N4V2 548 aa10.38□□□□□ -0.75
LINC00520-206ENST00000560336 CCDC97Q96F63 343 aaPredicted RBP10.38□□□□□ -0.75
LINC00520-206ENST00000560336 GGNBP2Q9H3C7 697 aa10.38□□□□□ -0.75
LINC00520-206ENST00000560336 ATXN7L1Q9ULK2 861 aaPredicted RBP10.38□□□□□ -0.75
LINC00520-206ENST00000560336 PCDHGC4Q9Y5F7 938 aa10.38□□□□□ -0.75
LINC00520-206ENST00000560336 GJA3Q9Y6H8 435 aa10.38□□□□□ -0.75
LINC00520-206ENST00000560336 USP54Q70EL1 1684 aa10.38□□□□□ -0.75
LINC00520-206ENST00000560336 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.37□□□□□ -0.75
LINC00520-206ENST00000560336 ATXN7O15265 892 aaPredicted RBP10.37□□□□□ -0.75
LINC00520-206ENST00000560336 HSPA2P54652 639 aa10.37□□□□□ -0.75
LINC00520-206ENST00000560336 LYPD4Q6UWN0 246 aa10.37□□□□□ -0.75
LINC00520-206ENST00000560336 ANKARQ7Z5J8 1434 aa10.37□□□□□ -0.75
LINC00520-206ENST00000560336 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.37□□□□□ -0.75
LINC00520-206ENST00000560336 KLRG1Q96E93 195 aa10.37□□□□□ -0.75
LINC00520-206ENST00000560336 ADGRL3Q9HAR2 1447 aa10.37□□□□□ -0.75
LINC00520-206ENST00000560336 PIK3C2AO00443 1686 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms