RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 ATP5J2-PTCD1G3V325 749 aa7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 CCER2I3L3R5 266 aa7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 TCERG1O14776 1098 aaKnown RBP7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 DNAJB2P25686 324 aa7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 PACS2Q86VP3 889 aa7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 SNED1Q8TER0 1413 aa7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 ZNF526Q8TF50 670 aaPredicted RBP7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 CLUAP1Q96AJ1 413 aa7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 OTUD5Q96G74 571 aa7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.75□□□□□ -1.17
CTDSPL2-204ENST00000558966 CACNA1FO60840 1977 aa7.74□□□□□ -1.17
CTDSPL2-204ENST00000558966 LTBP3Q9NS15 1303 aa7.74□□□□□ -1.17
CTDSPL2-204ENST00000558966 CD46P15529 392 aa7.74□□□□□ -1.17
CTDSPL2-204ENST00000558966 HOXA10P31260 410 aaPredicted RBP7.74□□□□□ -1.17
CTDSPL2-204ENST00000558966 EXOSC9Q06265 439 aaKnown RBP7.74□□□□□ -1.17
CTDSPL2-204ENST00000558966 SLC10A5Q5PT55 438 aa7.74□□□□□ -1.17
CTDSPL2-204ENST00000558966 OLFM4Q6UX06 510 aa7.74□□□□□ -1.17
CTDSPL2-204ENST00000558966 SLC51AQ86UW1 340 aa7.74□□□□□ -1.17
CTDSPL2-204ENST00000558966 SPIRE2Q8WWL2 714 aa7.74□□□□□ -1.17
CTDSPL2-204ENST00000558966 LIMD1Q9UGP4 676 aa7.74□□□□□ -1.17
CTDSPL2-204ENST00000558966 TRMT112Q9UI30 125 aaKnown RBP7.74□□□□□ -1.17
CTDSPL2-204ENST00000558966 SH3TC1Q8TE82 1336 aa7.73□□□□□ -1.17
CTDSPL2-204ENST00000558966 VAMP4O75379 141 aa7.73□□□□□ -1.17
CTDSPL2-204ENST00000558966 HCLS1P14317 486 aaPredicted RBP7.73□□□□□ -1.17
CTDSPL2-204ENST00000558966 LMNB1P20700 586 aa7.73□□□□□ -1.17
CTDSPL2-204ENST00000558966 PSEN2P49810 448 aa7.73□□□□□ -1.17
CTDSPL2-204ENST00000558966 TRIM28Q13263 835 aaKnown RBP7.73□□□□□ -1.17
CTDSPL2-204ENST00000558966 MCM6Q14566 821 aa7.73□□□□□ -1.17
CTDSPL2-204ENST00000558966 G2E3Q7L622 706 aa7.73□□□□□ -1.17
CTDSPL2-204ENST00000558966 RIC3Q7Z5B4 369 aa7.73□□□□□ -1.17
CTDSPL2-204ENST00000558966 HOMEZQ8IX15 550 aa7.73□□□□□ -1.17
CTDSPL2-204ENST00000558966 RPGRQ92834 1020 aaKnown RBP7.73□□□□□ -1.17
CTDSPL2-204ENST00000558966 CHMP4AQ9BY43 222 aa7.73□□□□□ -1.17
CTDSPL2-204ENST00000558966 TMEM134Q9H6X4 195 aa7.73□□□□□ -1.17
CTDSPL2-204ENST00000558966 TAF1P21675 1872 aa7.73□□□□□ -1.17
CTDSPL2-204ENST00000558966 ALDH1B1P30837 517 aa7.72□□□□□ -1.17
CTDSPL2-204ENST00000558966 CCDC93Q567U6 631 aa7.72□□□□□ -1.17
CTDSPL2-204ENST00000558966 SOGA3Q5TF21 947 aa7.72□□□□□ -1.17
CTDSPL2-204ENST00000558966 NLRP3Q96P20 1036 aa7.72□□□□□ -1.17
CTDSPL2-204ENST00000558966 MYD88Q99836 296 aa7.72□□□□□ -1.17
CTDSPL2-204ENST00000558966 STK31Q9BXU1 1019 aa7.72□□□□□ -1.17
CTDSPL2-204ENST00000558966 TAOK3Q9H2K8 898 aa7.72□□□□□ -1.17
CTDSPL2-204ENST00000558966 MYH16Q9H6N6 1097 aa7.72□□□□□ -1.17
CTDSPL2-204ENST00000558966 ZC3H4Q9UPT8 1303 aaKnown RBP7.72□□□□□ -1.17
CTDSPL2-204ENST00000558966 PI4KAP2A4QPH2 592 aa7.72□□□□□ -1.17
CTDSPL2-204ENST00000558966 PI4KAP1Q8N8J0 262 aa7.72□□□□□ -1.17
CTDSPL2-204ENST00000558966 FAM89AQ96GI7 184 aa7.72□□□□□ -1.17
CTDSPL2-204ENST00000558966 RBM17Q96I25 401 aaKnown RBP7.72□□□□□ -1.17
CTDSPL2-204ENST00000558966 CRAMP1Q96RY5 1269 aa7.72□□□□□ -1.17
CTDSPL2-204ENST00000558966 METTL22Q9BUU2 404 aaPredicted RBP7.72□□□□□ -1.17
CTDSPL2-204ENST00000558966 KIAA1468Q9P260 1216 aa7.72□□□□□ -1.17
CTDSPL2-204ENST00000558966 MAP3K2Q9Y2U5 619 aa7.72□□□□□ -1.17
CTDSPL2-204ENST00000558966 COL4A1P02462 1669 aa7.72□□□□□ -1.17
CTDSPL2-204ENST00000558966 ABCC4O15439 1325 aa7.71□□□□□ -1.17
CTDSPL2-204ENST00000558966 CEP350Q5VT06 3117 aa7.71□□□□□ -1.17
CTDSPL2-204ENST00000558966 PPEF1O14829 653 aaPredicted RBP7.71□□□□□ -1.18
CTDSPL2-204ENST00000558966 DDX58O95786 925 aaKnown RBP7.71□□□□□ -1.18
CTDSPL2-204ENST00000558966 DIXDC1Q155Q3 683 aa7.71□□□□□ -1.18
CTDSPL2-204ENST00000558966 RTL5Q5HYW3 569 aaPredicted RBP7.71□□□□□ -1.18
CTDSPL2-204ENST00000558966 KSR2Q6VAB6 950 aa7.71□□□□□ -1.18
CTDSPL2-204ENST00000558966 SULF1Q8IWU6 871 aa7.71□□□□□ -1.18
CTDSPL2-204ENST00000558966 C1orf115Q9H7X2 142 aa7.71□□□□□ -1.18
CTDSPL2-204ENST00000558966 NMRK2Q9NPI5 230 aa7.71□□□□□ -1.18
CTDSPL2-204ENST00000558966 LRRC37AA6NMS7 1700 aa7.7□□□□□ -1.18
CTDSPL2-204ENST00000558966 IGKV5-2P06315 115 aa7.7□□□□□ -1.18
CTDSPL2-204ENST00000558966 C1QTNF8P60827 252 aa7.7□□□□□ -1.18
CTDSPL2-204ENST00000558966 FKBP4Q02790 459 aaKnown RBP eCLIP7.7□□□□□ -1.18
CTDSPL2-204ENST00000558966 CSPP1Q1MSJ5 1256 aa7.7□□□□□ -1.18
CTDSPL2-204ENST00000558966 DIEXFQ68CQ4 756 aaKnown RBP7.7□□□□□ -1.18
CTDSPL2-204ENST00000558966 ZBTB38Q8NAP3 1195 aaPredicted RBP7.7□□□□□ -1.18
CTDSPL2-204ENST00000558966 CCDC191Q8NCU4 936 aa7.7□□□□□ -1.18
CTDSPL2-204ENST00000558966 ZBED2Q9BTP6 218 aa7.7□□□□□ -1.18
CTDSPL2-204ENST00000558966 COL4A5P29400 1685 aa7.7□□□□□ -1.18
CTDSPL2-204ENST00000558966 IRS4O14654 1257 aaPredicted RBP7.7□□□□□ -1.18
CTDSPL2-204ENST00000558966 PCCAP05165 728 aaPredicted RBP7.7□□□□□ -1.18
CTDSPL2-204ENST00000558966 RTKN2Q8IZC4 609 aa7.7□□□□□ -1.18
CTDSPL2-204ENST00000558966 RDH13Q8NBN7 331 aa7.7□□□□□ -1.18
CTDSPL2-204ENST00000558966 ARID3AQ99856 593 aa7.7□□□□□ -1.18
CTDSPL2-204ENST00000558966 ZNF277Q9NRM2 450 aaPredicted RBP7.7□□□□□ -1.18
CTDSPL2-204ENST00000558966 CWC25Q9NXE8 425 aaPredicted RBP7.7□□□□□ -1.18
CTDSPL2-204ENST00000558966 GLTPD2A6NH11 291 aa7.69□□□□□ -1.18
CTDSPL2-204ENST00000558966 MOXD2PA6NHM9 499 aa7.69□□□□□ -1.18
CTDSPL2-204ENST00000558966 E9PSI1 815 aa7.69□□□□□ -1.18
CTDSPL2-204ENST00000558966 RFC5P40937 340 aa7.69□□□□□ -1.18
CTDSPL2-204ENST00000558966 SLFN5Q08AF3 891 aa7.69□□□□□ -1.18
CTDSPL2-204ENST00000558966 FKBP5Q13451 457 aaPredicted RBP7.69□□□□□ -1.18
CTDSPL2-204ENST00000558966 SF3B3Q15393 1217 aaKnown RBP7.69□□□□□ -1.18
CTDSPL2-204ENST00000558966 CWF19L2Q2TBE0 894 aaKnown RBP7.69□□□□□ -1.18
CTDSPL2-204ENST00000558966 VARS2Q5ST30 1063 aaKnown RBP7.69□□□□□ -1.18
CTDSPL2-204ENST00000558966 CC2D2BQ6DHV5 1058 aa7.69□□□□□ -1.18
CTDSPL2-204ENST00000558966 JARID2Q92833 1246 aaPredicted RBP7.69□□□□□ -1.18
CTDSPL2-204ENST00000558966 PSMD1Q99460 953 aa7.69□□□□□ -1.18
CTDSPL2-204ENST00000558966 KDM2BQ8NHM5 1336 aa7.69□□□□□ -1.18
CTDSPL2-204ENST00000558966 MYH3P11055 1940 aa7.69□□□□□ -1.18
CTDSPL2-204ENST00000558966 WDR90Q96KV7 1748 aa7.68□□□□□ -1.18
CTDSPL2-204ENST00000558966 DUOX1Q9NRD9 1551 aa7.68□□□□□ -1.18
CTDSPL2-204ENST00000558966 NEURL1BA8MQ27 555 aa7.68□□□□□ -1.18
CTDSPL2-204ENST00000558966 APBB1O00213 710 aa7.68□□□□□ -1.18
CTDSPL2-204ENST00000558966 NDUFV2P19404 249 aa7.68□□□□□ -1.18
CTDSPL2-204ENST00000558966 GRAPQ13588 217 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms