RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-208ENST00000558768 SAAL1Q96ER3 474 aa10.96□□□□□ -0.65
TRPM1-208ENST00000558768 SELENOOQ9BVL4 669 aa10.96□□□□□ -0.65
TRPM1-208ENST00000558768 IRAK4Q9NWZ3 460 aa10.96□□□□□ -0.65
TRPM1-208ENST00000558768 CTNNA3Q9UI47 895 aa10.96□□□□□ -0.65
TRPM1-208ENST00000558768 EXOC6BQ9Y2D4 811 aa10.96□□□□□ -0.65
TRPM1-208ENST00000558768 MGEA5O60502 916 aa10.96□□□□□ -0.66
TRPM1-208ENST00000558768 TPD52P55327 224 aaPredicted RBP10.96□□□□□ -0.66
TRPM1-208ENST00000558768 NCBP1Q09161 790 aaKnown RBP10.96□□□□□ -0.66
TRPM1-208ENST00000558768 CTNNBL1Q8WYA6 563 aaPredicted RBP10.96□□□□□ -0.66
TRPM1-208ENST00000558768 PUS7Q96PZ0 661 aaKnown RBP10.96□□□□□ -0.66
TRPM1-208ENST00000558768 SYNMO15061 1565 aa10.96□□□□□ -0.66
TRPM1-208ENST00000558768 PLB1Q6P1J6 1458 aa10.96□□□□□ -0.66
TRPM1-208ENST00000558768 PPFIA4O75335 1185 aa10.96□□□□□ -0.66
TRPM1-208ENST00000558768 SLC4A2P04920 1241 aa10.96□□□□□ -0.66
TRPM1-208ENST00000558768 RHOXF2BP0C7M4 288 aa10.96□□□□□ -0.66
TRPM1-208ENST00000558768 DNM1Q05193 864 aaKnown RBP10.96□□□□□ -0.66
TRPM1-208ENST00000558768 SF3B2Q13435 895 aaKnown RBP10.96□□□□□ -0.66
TRPM1-208ENST00000558768 ELF2Q15723 593 aa10.96□□□□□ -0.66
TRPM1-208ENST00000558768 WWC2Q6AWC2 1192 aa10.96□□□□□ -0.66
TRPM1-208ENST00000558768 JARID2Q92833 1246 aaPredicted RBP10.96□□□□□ -0.66
TRPM1-208ENST00000558768 RHOXF2Q9BQY4 288 aa10.96□□□□□ -0.66
TRPM1-208ENST00000558768 RIPOR2Q9Y4F9 1068 aa10.96□□□□□ -0.66
TRPM1-208ENST00000558768 MORC2Q9Y6X9 1032 aaPredicted RBP10.96□□□□□ -0.66
TRPM1-208ENST00000558768 CEP170Q5SW79 1584 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 KRT86O43790 486 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 VIMP08670 466 aaKnown RBP10.95□□□□□ -0.66
TRPM1-208ENST00000558768 AMPHP49418 695 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 LIG3P49916 1009 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 STAG1Q8WVM7 1258 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 NEUROD6Q96NK8 337 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.95□□□□□ -0.66
TRPM1-208ENST00000558768 SYT1P21579 422 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 PSMC4P43686 418 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 ZNF75DP51815 510 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 CUL4AQ13619 759 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 E2F4Q16254 413 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 GGT6Q6P531 493 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 VSIG1Q86XK7 387 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 KLHDC4Q8TBB5 520 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 CHAMP1Q96JM3 812 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 NCAPGQ9BPX3 1015 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 THUMPD2Q9BTF0 503 aaKnown RBP10.95□□□□□ -0.66
TRPM1-208ENST00000558768 RASAL2Q9UJF2 1139 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 NOP2P46087 812 aaKnown RBP10.95□□□□□ -0.66
TRPM1-208ENST00000558768 FAM160A1Q05DH4 1040 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 ERCC6LQ2NKX8 1250 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 CNNM3Q8NE01 707 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 UBAC1Q9BSL1 405 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 NUF2Q9BZD4 464 aa10.95□□□□□ -0.66
TRPM1-208ENST00000558768 MINK1Q8N4C8 1332 aaPredicted RBP10.95□□□□□ -0.66
TRPM1-208ENST00000558768 SPAG1Q07617 926 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 PRPF4BQ13523 1007 aaKnown RBP10.94□□□□□ -0.66
TRPM1-208ENST00000558768 SNCBQ16143 134 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 COG3Q96JB2 828 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 PHF23Q9BUL5 403 aaPredicted RBP10.94□□□□□ -0.66
TRPM1-208ENST00000558768 ZHX3Q9H4I2 956 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 DACT1Q9NYF0 836 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 RASSF2P50749 326 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 NLRP5P59047 1200 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 PRR16Q569H4 304 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 CROCCP2Q86T23 111 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 USP6NLQ92738 828 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 PTPRCP08575 1304 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 NPHP3Q7Z494 1330 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 G3V3G9 751 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 KRT83P78385 493 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 IRX5P78411 483 aaPredicted RBP10.94□□□□□ -0.66
TRPM1-208ENST00000558768 DCAF8Q5TAQ9 597 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 ZSCAN25Q6NSZ9 544 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 RUFY4Q6ZNE9 571 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 ZNF215Q9UL58 517 aaPredicted RBP10.94□□□□□ -0.66
TRPM1-208ENST00000558768 TRIM35Q9UPQ4 493 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 PRC1O43663 620 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 CREB3O43889 395 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 MUM1Q2TAK8 710 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 NEK11Q8NG66 645 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 MCUR1Q96AQ8 359 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 CTAGE1Q96RT6 745 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 THEGQ9P2T0 379 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 PUF60Q9UHX1 559 aaKnown RBP10.94□□□□□ -0.66
TRPM1-208ENST00000558768 LAMC3Q9Y6N6 1575 aa10.94□□□□□ -0.66
TRPM1-208ENST00000558768 RAD21O60216 631 aa10.93□□□□□ -0.66
TRPM1-208ENST00000558768 CCDC170Q8IYT3 715 aa10.93□□□□□ -0.66
TRPM1-208ENST00000558768 TACO1Q9BSH4 297 aaKnown RBP10.93□□□□□ -0.66
TRPM1-208ENST00000558768 NKIRAS1Q9NYS0 192 aa10.93□□□□□ -0.66
TRPM1-208ENST00000558768 FAN1Q9Y2M0 1017 aa10.93□□□□□ -0.66
TRPM1-208ENST00000558768 CTDP1Q9Y5B0 961 aaPredicted RBP10.93□□□□□ -0.66
TRPM1-208ENST00000558768 N4BP3O15049 544 aa10.93□□□□□ -0.66
TRPM1-208ENST00000558768 KCNA4P22459 653 aa10.93□□□□□ -0.66
TRPM1-208ENST00000558768 IRX4P78413 519 aa10.93□□□□□ -0.66
TRPM1-208ENST00000558768 MMS22LQ6ZRQ5 1243 aa10.93□□□□□ -0.66
TRPM1-208ENST00000558768 ARMC2Q8NEN0 867 aa10.93□□□□□ -0.66
TRPM1-208ENST00000558768 SH3GL3Q99963 347 aa10.93□□□□□ -0.66
TRPM1-208ENST00000558768 PLXNC1O60486 1568 aa10.93□□□□□ -0.66
TRPM1-208ENST00000558768 ADGRF5Q8IZF2 1346 aa10.93□□□□□ -0.66
TRPM1-208ENST00000558768 TLDC2A0PJX2 215 aa10.93□□□□□ -0.66
TRPM1-208ENST00000558768 WDHD1O75717 1129 aaPredicted RBP10.93□□□□□ -0.66
TRPM1-208ENST00000558768 EIF2S2P20042 333 aaKnown RBP10.93□□□□□ -0.66
TRPM1-208ENST00000558768 TBC1D2BQ9UPU7 963 aa10.93□□□□□ -0.66
TRPM1-208ENST00000558768 PPIP5K1Q6PFW1 1433 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms