RNA–Protein interactions for RNA: ENST00000558357.5

INO80-205, Transcript of INO80 complex subunit, humanhuman

TSL 1 (best)

Gene INO80, Length 5,503 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-205ENST00000558357 CALML3P27482 149 aa12.82□□□□□ -0.36
INO80-205ENST00000558357 NBPF11Q86T75 865 aa12.82□□□□□ -0.36
INO80-205ENST00000558357 MICALL1Q8N3F8 863 aa12.82□□□□□ -0.36
INO80-205ENST00000558357 ST5P78524 1137 aa12.82□□□□□ -0.36
INO80-205ENST00000558357 NEK11Q8NG66 645 aa12.82□□□□□ -0.36
INO80-205ENST00000558357 RTL9Q8NET4 1388 aa12.82□□□□□ -0.36
INO80-205ENST00000558357 FOXO3O43524 673 aa12.82□□□□□ -0.36
INO80-205ENST00000558357 ATP2A2P16615 1042 aaKnown RBP12.82□□□□□ -0.36
INO80-205ENST00000558357 ATP2B3Q16720 1220 aa12.82□□□□□ -0.36
INO80-205ENST00000558357 MTRF1LQ9UGC7 380 aaKnown RBP12.82□□□□□ -0.36
INO80-205ENST00000558357 ANKRD36BQ8N2N9 1353 aa12.82□□□□□ -0.36
INO80-205ENST00000558357 DNM1Q05193 864 aaKnown RBP12.82□□□□□ -0.36
INO80-205ENST00000558357 TYRO3Q06418 890 aa12.82□□□□□ -0.36
INO80-205ENST00000558357 KRT79Q5XKE5 535 aa12.82□□□□□ -0.36
INO80-205ENST00000558357 SMARCC2Q8TAQ2 1214 aa12.82□□□□□ -0.36
INO80-205ENST00000558357 AMOTL2Q9Y2J4 779 aa12.82□□□□□ -0.36
INO80-205ENST00000558357 GJC1P36383 396 aa12.81□□□□□ -0.36
INO80-205ENST00000558357 VAV2P52735 878 aa12.81□□□□□ -0.36
INO80-205ENST00000558357 PLCB3Q01970 1234 aa12.81□□□□□ -0.36
INO80-205ENST00000558357 CCDC50Q8IVM0 306 aa12.81□□□□□ -0.36
INO80-205ENST00000558357 SCAF11Q99590 1463 aaKnown RBP12.81□□□□□ -0.36
INO80-205ENST00000558357 PEG3Q9GZU2 1588 aa12.81□□□□□ -0.36
INO80-205ENST00000558357 LMOD1P29536 600 aaPredicted RBP12.81□□□□□ -0.36
INO80-205ENST00000558357 UBXN1Q04323 297 aa12.81□□□□□ -0.36
INO80-205ENST00000558357 CPLX4Q7Z7G2 160 aa12.81□□□□□ -0.36
INO80-205ENST00000558357 MSANTD4Q8NCY6 345 aa12.81□□□□□ -0.36
INO80-205ENST00000558357 ALDH1L1O75891 902 aa12.81□□□□□ -0.36
INO80-205ENST00000558357 PSMC4P43686 418 aa12.81□□□□□ -0.36
INO80-205ENST00000558357 ARID5AQ03989 594 aa12.81□□□□□ -0.36
INO80-205ENST00000558357 TMEM110-MUSTN1A8MSY1 372 aa12.81□□□□□ -0.36
INO80-205ENST00000558357 IL15P40933 162 aaPredicted RBP12.81□□□□□ -0.36
INO80-205ENST00000558357 TNNC1P63316 161 aa12.81□□□□□ -0.36
INO80-205ENST00000558357 HS1BP3Q53T59 392 aa12.81□□□□□ -0.36
INO80-205ENST00000558357 PAXIP1Q6ZW49 1069 aaPredicted RBP12.81□□□□□ -0.36
INO80-205ENST00000558357 C11orf95C9JLR9 678 aaPredicted RBP12.8□□□□□ -0.36
INO80-205ENST00000558357 NOL3O60936 208 aaKnown RBP12.8□□□□□ -0.36
INO80-205ENST00000558357 FAM13AO94988 1023 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 ADAMTS2O95450 1211 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 XRCC6P12956 609 aaKnown RBP eCLIP12.8□□□□□ -0.36
INO80-205ENST00000558357 ALDH3A1P30838 453 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 FMNL3Q8IVF7 1028 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 ANKRD44Q8N8A2 993 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 CAPZA3Q96KX2 299 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 NAP1L3Q99457 506 aaPredicted RBP12.8□□□□□ -0.36
INO80-205ENST00000558357 SAMD15Q9P1V8 674 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 GUCA1BQ9UMX6 200 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 FAM83GA6ND36 823 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 RFC4P35249 363 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 SETDB1Q15047 1291 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 NBPF6Q5VWK0 638 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 NAA16Q6N069 864 aaPredicted RBP12.8□□□□□ -0.36
INO80-205ENST00000558357 HS2ST1Q7LGA3 356 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 NBPF5PQ86XG9 351 aaPredicted RBP12.8□□□□□ -0.36
INO80-205ENST00000558357 JAKMIP2Q96AA8 810 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 NBPF4Q96M43 638 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 TCEANC2Q96MN5 208 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 TSGA10Q9BZW7 698 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 STIM2Q9P246 746 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 VPS18Q9P253 973 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 TXNDC16Q9P2K2 825 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 NCOA1Q15788 1441 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 KRT2P35908 639 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 ATP6V0A2Q9Y487 856 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 CEP83Q9Y592 693 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 GNAT2P19087 354 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 MEIS3Q99687 375 aa12.8□□□□□ -0.36
INO80-205ENST00000558357 CEP57Q86XR8 500 aa12.79□□□□□ -0.36
INO80-205ENST00000558357 PRXQ9BXM0 1461 aa12.79□□□□□ -0.36
INO80-205ENST00000558357 ATP8B2P98198 1209 aa12.79□□□□□ -0.36
INO80-205ENST00000558357 ZNF569Q5MCW4 686 aa12.79□□□□□ -0.36
INO80-205ENST00000558357 TTC16Q8NEE8 873 aa12.79□□□□□ -0.36
INO80-205ENST00000558357 TCHPQ9BT92 498 aa12.79□□□□□ -0.36
INO80-205ENST00000558357 SLC9C2Q5TAH2 1124 aa12.79□□□□□ -0.36
INO80-205ENST00000558357 RRP36Q96EU6 259 aaKnown RBP12.79□□□□□ -0.36
INO80-205ENST00000558357 CCDC14Q49A88 953 aa12.79□□□□□ -0.36
INO80-205ENST00000558357 BRAPQ7Z569 592 aa12.79□□□□□ -0.36
INO80-205ENST00000558357 ZNF622Q969S3 477 aaKnown RBP eCLIP12.79□□□□□ -0.362e-6■■■□□ 17
INO80-205ENST00000558357 HDAC9Q9UKV0 1011 aa12.79□□□□□ -0.36
INO80-205ENST00000558357 MTUS1Q9ULD2 1270 aa12.79□□□□□ -0.36
INO80-205ENST00000558357 MRC2Q9UBG0 1479 aa12.79□□□□□ -0.36
INO80-205ENST00000558357 MAP3K9P80192 1104 aa12.78□□□□□ -0.36
INO80-205ENST00000558357 CALCOCO2Q13137 446 aa12.78□□□□□ -0.36
INO80-205ENST00000558357 KRT28Q7Z3Y7 464 aa12.78□□□□□ -0.36
INO80-205ENST00000558357 CCDC110Q8TBZ0 833 aa12.78□□□□□ -0.36
INO80-205ENST00000558357 JARID2Q92833 1246 aaPredicted RBP12.78□□□□□ -0.36
INO80-205ENST00000558357 CCDC114Q96M63 670 aa12.78□□□□□ -0.36
INO80-205ENST00000558357 CHPF2Q9P2E5 772 aa12.78□□□□□ -0.36
INO80-205ENST00000558357 RALGAPBQ86X10 1494 aa12.78□□□□□ -0.36
INO80-205ENST00000558357 ADGRF5Q8IZF2 1346 aa12.78□□□□□ -0.36
INO80-205ENST00000558357 SPDYE3A6NKU9 549 aa12.78□□□□□ -0.36
INO80-205ENST00000558357 IFT81Q8WYA0 676 aa12.78□□□□□ -0.36
INO80-205ENST00000558357 LUC7L2Q9Y383 392 aaKnown RBP12.78□□□□□ -0.36
INO80-205ENST00000558357 TOPBP1Q92547 1522 aa12.78□□□□□ -0.36
INO80-205ENST00000558357 TTC41PQ6P2S7 1318 aa12.78□□□□□ -0.36
INO80-205ENST00000558357 TPD52P55327 224 aaPredicted RBP12.78□□□□□ -0.36
INO80-205ENST00000558357 KARSQ15046 597 aaKnown RBP12.78□□□□□ -0.36
INO80-205ENST00000558357 PPP1R7Q15435 360 aa12.78□□□□□ -0.36
INO80-205ENST00000558357 CNGA4Q8IV77 575 aa12.78□□□□□ -0.36
INO80-205ENST00000558357 LZTFL1Q9NQ48 299 aa12.78□□□□□ -0.36
INO80-205ENST00000558357 NPHP3Q7Z494 1330 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms