RNA–Protein interactions for RNA: ENST00000558220.1

SHC4-205, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-205ENST00000558220 SCUBE3Q8IX30 993 aa10.97□□□□□ -0.65
SHC4-205ENST00000558220 NBPF15Q8N660 670 aa10.97□□□□□ -0.65
SHC4-205ENST00000558220 MAPK8IP3Q9UPT6 1336 aa10.97□□□□□ -0.65
SHC4-205ENST00000558220 FKBP4Q02790 459 aaKnown RBP eCLIP10.96□□□□□ -0.65
SHC4-205ENST00000558220 NFE2L2Q16236 605 aa10.96□□□□□ -0.65
SHC4-205ENST00000558220 CC2D2BQ6DHV5 1058 aa10.96□□□□□ -0.65
SHC4-205ENST00000558220 KIF6Q6ZMV9 814 aa10.96□□□□□ -0.65
SHC4-205ENST00000558220 PXYLP1Q8TE99 480 aa10.96□□□□□ -0.65
SHC4-205ENST00000558220 C7orf43Q8WVR3 580 aa10.96□□□□□ -0.65
SHC4-205ENST00000558220 ERBB4Q15303 1308 aa10.95□□□□□ -0.66
SHC4-205ENST00000558220 DDNO94850 711 aaPredicted RBP10.95□□□□□ -0.66
SHC4-205ENST00000558220 PUS10Q3MIT2 529 aaKnown RBP10.95□□□□□ -0.66
SHC4-205ENST00000558220 MIS18AQ9NYP9 233 aa10.95□□□□□ -0.66
SHC4-205ENST00000558220 MAP3K15Q6ZN16 1313 aa10.94□□□□□ -0.66
SHC4-205ENST00000558220 TESPA1A2RU30 521 aaPredicted RBP10.94□□□□□ -0.66
SHC4-205ENST00000558220 ST8SIA5O15466 376 aa10.94□□□□□ -0.66
SHC4-205ENST00000558220 EIF4A1P60842 406 aaKnown RBP10.94□□□□□ -0.66
SHC4-205ENST00000558220 HLFQ16534 295 aa10.94□□□□□ -0.66
SHC4-205ENST00000558220 LDHDQ86WU2 507 aa10.94□□□□□ -0.66
SHC4-205ENST00000558220 PLEKHF1Q96S99 279 aa10.94□□□□□ -0.66
SHC4-205ENST00000558220 BABAM1Q9NWV8 329 aa10.94□□□□□ -0.66
SHC4-205ENST00000558220 IBTKQ9P2D0 1353 aaPredicted RBP10.93□□□□□ -0.66
SHC4-205ENST00000558220 FAM177BA6PVY3 158 aa10.93□□□□□ -0.66
SHC4-205ENST00000558220 OATP04181 439 aa10.93□□□□□ -0.66
SHC4-205ENST00000558220 CRY2Q49AN0 593 aa10.93□□□□□ -0.66
SHC4-205ENST00000558220 PNMA8AQ86V59 439 aaPredicted RBP10.93□□□□□ -0.66
SHC4-205ENST00000558220 NGEFQ8N5V2 710 aa10.93□□□□□ -0.66
SHC4-205ENST00000558220 JDP2Q8WYK2 163 aa10.93□□□□□ -0.66
SHC4-205ENST00000558220 RPGRQ92834 1020 aaKnown RBP10.93□□□□□ -0.66
SHC4-205ENST00000558220 PSMD1Q99460 953 aa10.93□□□□□ -0.66
SHC4-205ENST00000558220 SPSB2Q99619 263 aa10.93□□□□□ -0.66
SHC4-205ENST00000558220 TMX4Q9H1E5 349 aaPredicted RBP10.93□□□□□ -0.66
SHC4-205ENST00000558220 AAASQ9NRG9 546 aa10.93□□□□□ -0.66
SHC4-205ENST00000558220 PKD2L1Q9P0L9 805 aa10.93□□□□□ -0.66
SHC4-205ENST00000558220 RRP7AQ9Y3A4 280 aaKnown RBP10.93□□□□□ -0.66
SHC4-205ENST00000558220 RIC1Q4ADV7 1423 aa10.92□□□□□ -0.66
SHC4-205ENST00000558220 IARSP41252 1262 aaKnown RBP10.92□□□□□ -0.66
SHC4-205ENST00000558220 LMOD3Q0VAK6 560 aa10.92□□□□□ -0.66
SHC4-205ENST00000558220 RALBP1Q15311 655 aa10.92□□□□□ -0.66
SHC4-205ENST00000558220 PARP10Q53GL7 1025 aa10.92□□□□□ -0.66
SHC4-205ENST00000558220 PPP1R42Q7Z4L9 355 aa10.92□□□□□ -0.66
SHC4-205ENST00000558220 SYNE4Q8N205 404 aa10.92□□□□□ -0.66
SHC4-205ENST00000558220 TAF1DQ9H5J8 278 aaPredicted RBP10.92□□□□□ -0.66
SHC4-205ENST00000558220 HACL1Q9UJ83 578 aa10.92□□□□□ -0.66
SHC4-205ENST00000558220 FZD9O00144 591 aa10.91□□□□□ -0.66
SHC4-205ENST00000558220 MYL6BP14649 208 aa10.91□□□□□ -0.66
SHC4-205ENST00000558220 HOXA10P31260 410 aaPredicted RBP10.91□□□□□ -0.66
SHC4-205ENST00000558220 GIGYF2Q6Y7W6 1299 aaKnown RBP10.91□□□□□ -0.66
SHC4-205ENST00000558220 GPC2Q8N158 579 aa10.91□□□□□ -0.66
SHC4-205ENST00000558220 RBM17Q96I25 401 aaKnown RBP10.91□□□□□ -0.66
SHC4-205ENST00000558220 ZNF277Q9NRM2 450 aaPredicted RBP10.91□□□□□ -0.66
SHC4-205ENST00000558220 TSPYL4Q9UJ04 414 aa10.91□□□□□ -0.66
SHC4-205ENST00000558220 RNF123Q5XPI4 1314 aa10.9□□□□□ -0.66
SHC4-205ENST00000558220 HSPA1AP0DMV8 641 aaKnown RBP10.9□□□□□ -0.66
SHC4-205ENST00000558220 HSPA1BP0DMV9 641 aaKnown RBP10.9□□□□□ -0.66
SHC4-205ENST00000558220 EIF6P56537 245 aaKnown RBP10.9□□□□□ -0.66
SHC4-205ENST00000558220 FOXC1Q12948 553 aa10.9□□□□□ -0.66
SHC4-205ENST00000558220 HSP90AB3PQ58FF7 597 aa10.9□□□□□ -0.66
SHC4-205ENST00000558220 RBM26Q5T8P6 1007 aaKnown RBP10.9□□□□□ -0.66
SHC4-205ENST00000558220 SMYD5Q6GMV2 418 aa10.9□□□□□ -0.66
SHC4-205ENST00000558220 TTLL7Q6ZT98 887 aa10.9□□□□□ -0.66
SHC4-205ENST00000558220 METTL3Q86U44 580 aaKnown RBP10.9□□□□□ -0.66
SHC4-205ENST00000558220 NUTM1Q86Y26 1132 aa10.9□□□□□ -0.66
SHC4-205ENST00000558220 NLRP3Q96P20 1036 aa10.9□□□□□ -0.66
SHC4-205ENST00000558220 CRAMP1Q96RY5 1269 aa10.9□□□□□ -0.66
SHC4-205ENST00000558220 VPS33BQ9H267 617 aa10.9□□□□□ -0.66
SHC4-205ENST00000558220 TMEM88BA6NKF7 163 aa10.89□□□□□ -0.67
SHC4-205ENST00000558220 GPTP24298 496 aa10.89□□□□□ -0.67
SHC4-205ENST00000558220 EPHX2P34913 555 aa10.89□□□□□ -0.67
SHC4-205ENST00000558220 RIPK4P57078 832 aa10.89□□□□□ -0.67
SHC4-205ENST00000558220 EAPPQ56P03 285 aaPredicted RBP10.89□□□□□ -0.67
SHC4-205ENST00000558220 COL13A1Q5TAT6 717 aaPredicted RBP10.89□□□□□ -0.67
SHC4-205ENST00000558220 ZNF34Q8IZ26 560 aa10.89□□□□□ -0.67
SHC4-205ENST00000558220 TNS4Q8IZW8 715 aa10.89□□□□□ -0.67
SHC4-205ENST00000558220 ZBTB3Q9H5J0 574 aa10.89□□□□□ -0.67
SHC4-205ENST00000558220 PASKQ96RG2 1323 aa10.88□□□□□ -0.67
SHC4-205ENST00000558220 LMOD1P29536 600 aaPredicted RBP10.88□□□□□ -0.67
SHC4-205ENST00000558220 SUSD4Q5VX71 490 aa10.88□□□□□ -0.67
SHC4-205ENST00000558220 THUMPD2Q9BTF0 503 aaKnown RBP10.88□□□□□ -0.67
SHC4-205ENST00000558220 ABCC12Q96J65 1359 aa10.88□□□□□ -0.67
SHC4-205ENST00000558220 ANKRD36CQ5JPF3 1778 aa10.88□□□□□ -0.67
SHC4-205ENST00000558220 UBN2Q6ZU65 1347 aa10.87□□□□□ -0.67
SHC4-205ENST00000558220 ZNF541Q9H0D2 1346 aa10.87□□□□□ -0.67
SHC4-205ENST00000558220 EIF2S2P20042 333 aaKnown RBP10.87□□□□□ -0.67
SHC4-205ENST00000558220 HIC1Q14526 733 aa10.87□□□□□ -0.67
SHC4-205ENST00000558220 SLC10A5Q5PT55 438 aa10.87□□□□□ -0.67
SHC4-205ENST00000558220 OLFM4Q6UX06 510 aa10.87□□□□□ -0.67
SHC4-205ENST00000558220 LARGE2Q8N3Y3 721 aa10.87□□□□□ -0.67
SHC4-205ENST00000558220 SUPT20HQ8NEM7 779 aa10.87□□□□□ -0.67
SHC4-205ENST00000558220 UTP14AQ9BVJ6 771 aaKnown RBP10.87□□□□□ -0.67
SHC4-205ENST00000558220 MKRN1Q9UHC7 482 aaKnown RBP10.87□□□□□ -0.67
SHC4-205ENST00000558220 CNTNAP1P78357 1384 aa10.87□□□□□ -0.67
SHC4-205ENST00000558220 SNED1Q8TER0 1413 aa10.86□□□□□ -0.67
SHC4-205ENST00000558220 ADAMTSL1Q8N6G6 1762 aa10.86□□□□□ -0.67
SHC4-205ENST00000558220 BBOX1O75936 387 aa10.86□□□□□ -0.67
SHC4-205ENST00000558220 NTSR2O95665 410 aa10.86□□□□□ -0.67
SHC4-205ENST00000558220 TMPOP42166 694 aaKnown RBP10.86□□□□□ -0.67
SHC4-205ENST00000558220 RPIAP49247 311 aa10.86□□□□□ -0.67
SHC4-205ENST00000558220 CNTROBQ8N137 903 aa10.86□□□□□ -0.67
SHC4-205ENST00000558220 AIDAQ96BJ3 306 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms