RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 ERFEQ4G0M1 354 aa9.83□□□□□ -0.84
SPG11-205ENST00000558080 SUSD4Q5VX71 490 aa9.83□□□□□ -0.84
SPG11-205ENST00000558080 GIGYF2Q6Y7W6 1299 aaKnown RBP9.83□□□□□ -0.84
SPG11-205ENST00000558080 C16orf71Q8IYS4 520 aaPredicted RBP9.83□□□□□ -0.84
SPG11-205ENST00000558080 KLRG2A4D1S0 409 aaPredicted RBP9.82□□□□□ -0.84
SPG11-205ENST00000558080 TOMM70O94826 608 aa9.82□□□□□ -0.84
SPG11-205ENST00000558080 S1PR4O95977 384 aa9.82□□□□□ -0.84
SPG11-205ENST00000558080 SLC10A3P09131 477 aa9.82□□□□□ -0.84
SPG11-205ENST00000558080 HSPA6P17066 643 aa9.82□□□□□ -0.84
SPG11-205ENST00000558080 CCDC184Q52MB2 194 aa9.82□□□□□ -0.84
SPG11-205ENST00000558080 LRP10Q7Z4F1 713 aa9.82□□□□□ -0.84
SPG11-205ENST00000558080 ZNF598Q86UK7 904 aaKnown RBP9.82□□□□□ -0.84
SPG11-205ENST00000558080 ZNF34Q8IZ26 560 aa9.82□□□□□ -0.84
SPG11-205ENST00000558080 NYXQ9GZU5 481 aa9.82□□□□□ -0.84
SPG11-205ENST00000558080 ABCC12Q96J65 1359 aa9.82□□□□□ -0.84
SPG11-205ENST00000558080 UBN2Q6ZU65 1347 aa9.82□□□□□ -0.84
SPG11-205ENST00000558080 CACNA1FO60840 1977 aa9.81□□□□□ -0.84
SPG11-205ENST00000558080 ADH1BP00325 375 aa9.81□□□□□ -0.84
SPG11-205ENST00000558080 OLFM4Q6UX06 510 aa9.81□□□□□ -0.84
SPG11-205ENST00000558080 COPS6Q7L5N1 327 aa9.81□□□□□ -0.84
SPG11-205ENST00000558080 XAGE3Q8WTP9 111 aa9.81□□□□□ -0.84
SPG11-205ENST00000558080 C7orf43Q8WVR3 580 aa9.81□□□□□ -0.84
SPG11-205ENST00000558080 TAOK3Q9H2K8 898 aa9.81□□□□□ -0.84
SPG11-205ENST00000558080 DDX21Q9NR30 783 aaKnown RBP eCLIP9.81□□□□□ -0.84
SPG11-205ENST00000558080 CEP350Q5VT06 3117 aa9.81□□□□□ -0.84
SPG11-205ENST00000558080 WDR90Q96KV7 1748 aa9.81□□□□□ -0.84
SPG11-205ENST00000558080 ZC3H4Q9UPT8 1303 aaKnown RBP9.81□□□□□ -0.84
SPG11-205ENST00000558080 DDX60Q8IY21 1712 aaKnown RBP9.8□□□□□ -0.84
SPG11-205ENST00000558080 GLTPD2A6NH11 291 aa9.8□□□□□ -0.84
SPG11-205ENST00000558080 NR1I2O75469 434 aa9.8□□□□□ -0.84
SPG11-205ENST00000558080 NTSR2O95665 410 aa9.8□□□□□ -0.84
SPG11-205ENST00000558080 ALDH1B1P30837 517 aa9.8□□□□□ -0.84
SPG11-205ENST00000558080 CCDC93Q567U6 631 aa9.8□□□□□ -0.84
SPG11-205ENST00000558080 SOGA3Q5TF21 947 aa9.8□□□□□ -0.84
SPG11-205ENST00000558080 PPP1R42Q7Z4L9 355 aa9.8□□□□□ -0.84
SPG11-205ENST00000558080 PXYLP1Q8TE99 480 aa9.8□□□□□ -0.84
SPG11-205ENST00000558080 MBIPQ9NS73 344 aa9.8□□□□□ -0.84
SPG11-205ENST00000558080 CHPF2Q9P2E5 772 aa9.8□□□□□ -0.84
SPG11-205ENST00000558080 LTBP3Q9NS15 1303 aa9.8□□□□□ -0.84
SPG11-205ENST00000558080 SCN4AP35499 1836 aa9.79□□□□□ -0.84
SPG11-205ENST00000558080 TCERG1O14776 1098 aaKnown RBP9.79□□□□□ -0.84
SPG11-205ENST00000558080 PPEF1O14829 653 aaPredicted RBP9.79□□□□□ -0.84
SPG11-205ENST00000558080 PARP10Q53GL7 1025 aa9.79□□□□□ -0.84
SPG11-205ENST00000558080 HDGFL1Q5TGJ6 251 aa9.79□□□□□ -0.84
SPG11-205ENST00000558080 DUSP27Q5VZP5 1158 aa9.79□□□□□ -0.84
SPG11-205ENST00000558080 LIAT1Q6ZQX7 453 aa9.79□□□□□ -0.84
SPG11-205ENST00000558080 RPGRQ92834 1020 aaKnown RBP9.79□□□□□ -0.84
SPG11-205ENST00000558080 ZNF428Q96B54 188 aa9.79□□□□□ -0.84
SPG11-205ENST00000558080 IBTKQ9P2D0 1353 aaPredicted RBP9.78□□□□□ -0.84
SPG11-205ENST00000558080 ELL2O00472 640 aaPredicted RBP9.78□□□□□ -0.84
SPG11-205ENST00000558080 DGAT1O75907 488 aa9.78□□□□□ -0.84
SPG11-205ENST00000558080 OATP04181 439 aa9.78□□□□□ -0.84
SPG11-205ENST00000558080 ZNF853P0CG23 659 aa9.78□□□□□ -0.84
SPG11-205ENST00000558080 VEGFAP15692 232 aaPredicted RBP9.78□□□□□ -0.84
SPG11-205ENST00000558080 FKBP4Q02790 459 aaKnown RBP eCLIP9.78□□□□□ -0.84
SPG11-205ENST00000558080 CRY2Q49AN0 593 aa9.78□□□□□ -0.84
SPG11-205ENST00000558080 RBM17Q96I25 401 aaKnown RBP9.78□□□□□ -0.84
SPG11-205ENST00000558080 UTP14AQ9BVJ6 771 aaKnown RBP9.78□□□□□ -0.84
SPG11-205ENST00000558080 ZNF277Q9NRM2 450 aaPredicted RBP9.78□□□□□ -0.84
SPG11-205ENST00000558080 RIC1Q4ADV7 1423 aa9.77□□□□□ -0.85
SPG11-205ENST00000558080 POTECB2RU33 542 aa9.77□□□□□ -0.85
SPG11-205ENST00000558080 DDNO94850 711 aaPredicted RBP9.77□□□□□ -0.85
SPG11-205ENST00000558080 HOXB7P09629 217 aa9.77□□□□□ -0.85
SPG11-205ENST00000558080 GNAI1P63096 354 aa9.77□□□□□ -0.85
SPG11-205ENST00000558080 CALD1Q05682 793 aaKnown RBP9.77□□□□□ -0.85
SPG11-205ENST00000558080 TCIRG1Q13488 830 aa9.77□□□□□ -0.85
SPG11-205ENST00000558080 PKDCCQ504Y2 493 aa9.77□□□□□ -0.85
SPG11-205ENST00000558080 HSP90AB3PQ58FF7 597 aa9.77□□□□□ -0.85
SPG11-205ENST00000558080 ZNF697Q5TEC3 545 aa9.77□□□□□ -0.85
SPG11-205ENST00000558080 NLRP10Q86W26 655 aa9.77□□□□□ -0.85
SPG11-205ENST00000558080 RTKN2Q8IZC4 609 aa9.77□□□□□ -0.85
SPG11-205ENST00000558080 SYNE4Q8N205 404 aa9.77□□□□□ -0.85
SPG11-205ENST00000558080 NLRP3Q96P20 1036 aa9.77□□□□□ -0.85
SPG11-205ENST00000558080 IFT57Q9NWB7 429 aa9.77□□□□□ -0.85
SPG11-205ENST00000558080 DBF4Q9UBU7 674 aaPredicted RBP9.77□□□□□ -0.85
SPG11-205ENST00000558080 MYH3P11055 1940 aa9.77□□□□□ -0.85
SPG11-205ENST00000558080 SEMA3EO15041 775 aa9.76□□□□□ -0.85
SPG11-205ENST00000558080 ANP32CO43423 234 aa9.76□□□□□ -0.85
SPG11-205ENST00000558080 HCLS1P14317 486 aaPredicted RBP9.76□□□□□ -0.85
SPG11-205ENST00000558080 HOXA10P31260 410 aaPredicted RBP9.76□□□□□ -0.85
SPG11-205ENST00000558080 FSTL1Q12841 308 aa9.76□□□□□ -0.85
SPG11-205ENST00000558080 SLC10A5Q5PT55 438 aa9.76□□□□□ -0.85
SPG11-205ENST00000558080 SLC51AQ86UW1 340 aa9.76□□□□□ -0.85
SPG11-205ENST00000558080 PLBD2Q8NHP8 589 aa9.76□□□□□ -0.85
SPG11-205ENST00000558080 CRAMP1Q96RY5 1269 aa9.76□□□□□ -0.85
SPG11-205ENST00000558080 SLC6A16Q9GZN6 736 aa9.76□□□□□ -0.85
SPG11-205ENST00000558080 MRS2Q9HD23 443 aa9.76□□□□□ -0.85
SPG11-205ENST00000558080 HYPKQ9NX55 129 aa9.76□□□□□ -0.85
SPG11-205ENST00000558080 TRMT112Q9UI30 125 aaKnown RBP9.76□□□□□ -0.85
SPG11-205ENST00000558080 POLR2AP24928 1970 aaKnown RBP9.75□□□□□ -0.85
SPG11-205ENST00000558080 SPEF2Q9C093 1822 aa9.75□□□□□ -0.85
SPG11-205ENST00000558080 ATP5J2-PTCD1G3V325 749 aa9.75□□□□□ -0.85
SPG11-205ENST00000558080 GDF9O60383 454 aa9.75□□□□□ -0.85
SPG11-205ENST00000558080 IARSP41252 1262 aaKnown RBP9.75□□□□□ -0.85
SPG11-205ENST00000558080 HTRA3P83110 453 aa9.75□□□□□ -0.85
SPG11-205ENST00000558080 HIC1Q14526 733 aa9.75□□□□□ -0.85
SPG11-205ENST00000558080 METTL3Q86U44 580 aaKnown RBP9.75□□□□□ -0.85
SPG11-205ENST00000558080 SCUBE3Q8IX30 993 aa9.75□□□□□ -0.85
SPG11-205ENST00000558080 C8orf58Q8NAV2 365 aa9.75□□□□□ -0.85
SPG11-205ENST00000558080 SMC1BQ8NDV3 1235 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms