RNA–Protein interactions for RNA: ENST00000557797.5

SHC4-204, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 821 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-204ENST00000557797 SLC35F4A4IF30 521 aa10.3□□□□□ -0.76
SHC4-204ENST00000557797 ITGAEP38570 1179 aa10.3□□□□□ -0.76
SHC4-204ENST00000557797 SLC27A3Q5K4L6 730 aa10.3□□□□□ -0.76
SHC4-204ENST00000557797 LYSMD3Q7Z3D4 306 aa10.3□□□□□ -0.76
SHC4-204ENST00000557797 ABTB2Q8N961 1025 aa10.3□□□□□ -0.76
SHC4-204ENST00000557797 NUDT16Q96DE0 195 aaKnown RBP10.3□□□□□ -0.76
SHC4-204ENST00000557797 GRIP2Q9C0E4 1043 aa10.3□□□□□ -0.76
SHC4-204ENST00000557797 ETNK1Q9HBU6 452 aa10.3□□□□□ -0.76
SHC4-204ENST00000557797 USP6P35125 1406 aa10.3□□□□□ -0.76
SHC4-204ENST00000557797 SLIT3O75094 1523 aa10.29□□□□□ -0.76
SHC4-204ENST00000557797 LOC105371045A0A1W2PR82 267 aa10.29□□□□□ -0.76
SHC4-204ENST00000557797 EXOC5O00471 708 aa10.29□□□□□ -0.76
SHC4-204ENST00000557797 SCNN1DP51172 638 aa10.29□□□□□ -0.76
SHC4-204ENST00000557797 TBC1D9Q6ZT07 1266 aa10.29□□□□□ -0.76
SHC4-204ENST00000557797 PRICKLE2Q7Z3G6 844 aa10.29□□□□□ -0.76
SHC4-204ENST00000557797 NLRP13Q86W25 1043 aa10.29□□□□□ -0.76
SHC4-204ENST00000557797 CNKSR1Q969H4 720 aa10.29□□□□□ -0.76
SHC4-204ENST00000557797 XAGE2Q96GT9 111 aa10.29□□□□□ -0.76
SHC4-204ENST00000557797 NLRP3Q96P20 1036 aa10.29□□□□□ -0.76
SHC4-204ENST00000557797 ESYT1Q9BSJ8 1104 aa10.29□□□□□ -0.76
SHC4-204ENST00000557797 CARD10Q9BWT7 1032 aa10.29□□□□□ -0.76
SHC4-204ENST00000557797 ACEP12821 1306 aa10.29□□□□□ -0.76
SHC4-204ENST00000557797 USP17L5A8MUK1 530 aa10.28□□□□□ -0.76
SHC4-204ENST00000557797 NCOA4Q13772 614 aa10.28□□□□□ -0.76
SHC4-204ENST00000557797 DEPDC4Q8N2C3 294 aa10.28□□□□□ -0.76
SHC4-204ENST00000557797 CCDC155Q8N6L0 562 aa10.28□□□□□ -0.76
SHC4-204ENST00000557797 KAT6BQ8WYB5 2073 aa10.28□□□□□ -0.76
SHC4-204ENST00000557797 RGPD5Q99666 1765 aa10.27□□□□□ -0.77
SHC4-204ENST00000557797 VSIG8P0DPA2 414 aa10.27□□□□□ -0.77
SHC4-204ENST00000557797 RHOQP17081 205 aa10.27□□□□□ -0.77
SHC4-204ENST00000557797 HTRA3P83110 453 aa10.27□□□□□ -0.77
SHC4-204ENST00000557797 TFCP2L1Q9NZI6 479 aa10.27□□□□□ -0.77
SHC4-204ENST00000557797 PCDHGA11Q9Y5H2 935 aa10.27□□□□□ -0.77
SHC4-204ENST00000557797 PIK3C2AO00443 1686 aa10.27□□□□□ -0.77
SHC4-204ENST00000557797 LY75O60449 1722 aa10.27□□□□□ -0.77
SHC4-204ENST00000557797 CENPCQ03188 943 aa10.26□□□□□ -0.77
SHC4-204ENST00000557797 FSTL1Q12841 308 aa10.26□□□□□ -0.77
SHC4-204ENST00000557797 EML3Q32P44 896 aa10.26□□□□□ -0.77
SHC4-204ENST00000557797 TRAK1Q9UPV9 953 aa10.26□□□□□ -0.77
SHC4-204ENST00000557797 CCDC7Q96M83 1385 aa10.26□□□□□ -0.77
SHC4-204ENST00000557797 ATP9BO43861 1147 aa10.25□□□□□ -0.77
SHC4-204ENST00000557797 LZTS3O60299 673 aaPredicted RBP10.25□□□□□ -0.77
SHC4-204ENST00000557797 PLEKHM2Q8IWE5 1019 aa10.25□□□□□ -0.77
SHC4-204ENST00000557797 IRF7Q92985 503 aa10.25□□□□□ -0.77
SHC4-204ENST00000557797 ACSBG1Q96GR2 724 aa10.25□□□□□ -0.77
SHC4-204ENST00000557797 PPIP5K1Q6PFW1 1433 aa10.24□□□□□ -0.77
SHC4-204ENST00000557797 USP17L3A6NCW0 530 aa10.24□□□□□ -0.77
SHC4-204ENST00000557797 USP17L4A6NCW7 530 aa10.24□□□□□ -0.77
SHC4-204ENST00000557797 SPATA31C2B4DYI2 1134 aa10.24□□□□□ -0.77
SHC4-204ENST00000557797 WIPF1O43516 503 aa10.24□□□□□ -0.77
SHC4-204ENST00000557797 HSPA1AP0DMV8 641 aaKnown RBP10.24□□□□□ -0.77
SHC4-204ENST00000557797 HSPA1BP0DMV9 641 aaKnown RBP10.24□□□□□ -0.77
SHC4-204ENST00000557797 POU4F2Q12837 409 aa10.24□□□□□ -0.77
SHC4-204ENST00000557797 USP17L2Q6R6M4 530 aa10.24□□□□□ -0.77
SHC4-204ENST00000557797 USP17L1Q7RTZ2 530 aa10.24□□□□□ -0.77
SHC4-204ENST00000557797 CPSF1Q10570 1443 aaKnown RBP10.24□□□□□ -0.77
SHC4-204ENST00000557797 TMEM229AB2RXF0 380 aa10.23□□□□□ -0.77
SHC4-204ENST00000557797 INHAP05111 366 aa10.23□□□□□ -0.77
SHC4-204ENST00000557797 GMPRP36959 345 aa10.23□□□□□ -0.77
SHC4-204ENST00000557797 GDF10P55107 478 aa10.23□□□□□ -0.77
SHC4-204ENST00000557797 NBPF10Q6P3W6 841 aaKnown RBP10.23□□□□□ -0.77
SHC4-204ENST00000557797 NBPF15Q8N660 670 aa10.23□□□□□ -0.77
SHC4-204ENST00000557797 NOD1Q9Y239 953 aa10.23□□□□□ -0.77
SHC4-204ENST00000557797 C10orf71Q711Q0 1435 aa10.23□□□□□ -0.77
SHC4-204ENST00000557797 ITGA6P23229 1130 aa10.22□□□□□ -0.77
SHC4-204ENST00000557797 GTF2IP78347 998 aa10.22□□□□□ -0.77
SHC4-204ENST00000557797 COL23A1Q86Y22 540 aaPredicted RBP10.22□□□□□ -0.77
SHC4-204ENST00000557797 CALR3Q96L12 384 aaKnown RBP10.22□□□□□ -0.77
SHC4-204ENST00000557797 NMRK2Q9NPI5 230 aa10.22□□□□□ -0.77
SHC4-204ENST00000557797 IGSF1Q8N6C5 1336 aa10.22□□□□□ -0.77
SHC4-204ENST00000557797 NANOS1Q8WY41 292 aaKnown RBP10.21□□□□□ -0.77
SHC4-204ENST00000557797 ZSCAN10Q96SZ4 725 aaPredicted RBP10.21□□□□□ -0.77
SHC4-204ENST00000557797 CUEDC1Q9NWM3 386 aaPredicted RBP10.21□□□□□ -0.77
SHC4-204ENST00000557797 QRICH2Q9H0J4 1663 aa10.21□□□□□ -0.78
SHC4-204ENST00000557797 ZBTB7CA1YPR0 619 aa10.2□□□□□ -0.78
SHC4-204ENST00000557797 ARHGEF25Q86VW2 580 aa10.2□□□□□ -0.78
SHC4-204ENST00000557797 GPR161Q8N6U8 529 aaKnown RBP10.2□□□□□ -0.78
SHC4-204ENST00000557797 CDK19Q9BWU1 502 aa10.2□□□□□ -0.78
SHC4-204ENST00000557797 TFIP11Q9UBB9 837 aaKnown RBP10.2□□□□□ -0.78
SHC4-204ENST00000557797 MAFBQ9Y5Q3 323 aaPredicted RBP10.2□□□□□ -0.78
SHC4-204ENST00000557797 USP54Q70EL1 1684 aa10.19□□□□□ -0.78
SHC4-204ENST00000557797 TNRC18O15417 2968 aaPredicted RBP10.19□□□□□ -0.78
SHC4-204ENST00000557797 CLDN10P78369 228 aa10.19□□□□□ -0.78
SHC4-204ENST00000557797 TLR1Q15399 786 aa10.19□□□□□ -0.78
SHC4-204ENST00000557797 WDR44Q5JSH3 913 aa10.19□□□□□ -0.78
SHC4-204ENST00000557797 MSL1Q68DK7 614 aa10.19□□□□□ -0.78
SHC4-204ENST00000557797 TAS1R3Q7RTX0 852 aa10.19□□□□□ -0.78
SHC4-204ENST00000557797 ARID3AQ99856 593 aa10.19□□□□□ -0.78
SHC4-204ENST00000557797 KIAA1024Q9UPX6 916 aa10.19□□□□□ -0.78
SHC4-204ENST00000557797 PALM3A6NDB9 673 aaPredicted RBP10.18□□□□□ -0.78
SHC4-204ENST00000557797 CSB-PGBD3P0DP91 1061 aa10.18□□□□□ -0.78
SHC4-204ENST00000557797 SLC4A9Q96Q91 983 aa10.18□□□□□ -0.78
SHC4-204ENST00000557797 PPP1R12CQ9BZL4 782 aa10.18□□□□□ -0.78
SHC4-204ENST00000557797 DYRK1BQ9Y463 629 aa10.18□□□□□ -0.78
SHC4-204ENST00000557797 TNRC6CQ9HCJ0 1690 aaKnown RBP10.18□□□□□ -0.78
SHC4-204ENST00000557797 KIF13BQ9NQT8 1826 aa10.17□□□□□ -0.78
SHC4-204ENST00000557797 KIAA1551Q9HCM1 1747 aa10.17□□□□□ -0.78
SHC4-204ENST00000557797 KIAA1210Q9ULL0 1709 aa10.17□□□□□ -0.78
SHC4-204ENST00000557797 ZBTB7BO15156 539 aaPredicted RBP10.17□□□□□ -0.78
SHC4-204ENST00000557797 KCNQ4P56696 695 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms