RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 MAPK8IP1Q9UQF2 711 aa5.16□□□□□ -1.58
TDP1-217ENST00000557782 ROBO2Q9HCK4 1378 aa5.16□□□□□ -1.58
TDP1-217ENST00000557782 A0A1W2PP55 124 aa5.15□□□□□ -1.59
TDP1-217ENST00000557782 XYLBO75191 536 aa5.15□□□□□ -1.59
TDP1-217ENST00000557782 PEX14O75381 377 aa5.15□□□□□ -1.59
TDP1-217ENST00000557782 FBXO24O75426 580 aa5.15□□□□□ -1.59
TDP1-217ENST00000557782 TRIM37O94972 964 aa5.15□□□□□ -1.59
TDP1-217ENST00000557782 GARTP22102 1010 aa5.15□□□□□ -1.59
TDP1-217ENST00000557782 MASP1P48740 699 aa5.15□□□□□ -1.59
TDP1-217ENST00000557782 RELBQ01201 579 aa5.15□□□□□ -1.59
TDP1-217ENST00000557782 CAMK2GQ13555 558 aaPredicted RBP5.15□□□□□ -1.59
TDP1-217ENST00000557782 GRIN2CQ14957 1233 aa5.15□□□□□ -1.59
TDP1-217ENST00000557782 TCEA2Q15560 299 aa5.15□□□□□ -1.59
TDP1-217ENST00000557782 CTC1Q2NKJ3 1217 aa5.15□□□□□ -1.59
TDP1-217ENST00000557782 CCDC81Q6ZN84 652 aa5.15□□□□□ -1.59
TDP1-217ENST00000557782 NLRP13Q86W25 1043 aa5.15□□□□□ -1.59
TDP1-217ENST00000557782 CCDC146Q8IYE0 955 aa5.15□□□□□ -1.59
TDP1-217ENST00000557782 SYNPOQ8N3V7 929 aa5.15□□□□□ -1.59
TDP1-217ENST00000557782 C7orf43Q8WVR3 580 aa5.15□□□□□ -1.59
TDP1-217ENST00000557782 FERD3LQ96RJ6 166 aa5.15□□□□□ -1.59
TDP1-217ENST00000557782 HOMER2Q9NSB8 354 aa5.15□□□□□ -1.59
TDP1-217ENST00000557782 GEMIN8Q9NWZ8 242 aaKnown RBP5.15□□□□□ -1.59
TDP1-217ENST00000557782 CNTN3Q9P232 1028 aa5.15□□□□□ -1.59
TDP1-217ENST00000557782 TMEM238LA0A1B0GVL6 79 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 PHF20L1A8MW92 1017 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 EGFRP00533 1210 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 LMNB1P20700 586 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 NNTQ13423 1086 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 FXNQ16595 210 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 MTERF2Q49AM1 385 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 C2orf27AQ580R0 203 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 FBXW10Q5XX13 1052 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 TPTE2Q6XPS3 522 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 FAM196AQ6ZSG2 479 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 FMNL3Q8IVF7 1028 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 CELF2-AS1Q8N7Q2 184 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 THAP3Q8WTV1 239 aaPredicted RBP5.14□□□□□ -1.59
TDP1-217ENST00000557782 AGBL1Q96MI9 1066 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 GRIP2Q9C0E4 1043 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 ZNF395Q9H8N7 513 aaPredicted RBP5.14□□□□□ -1.59
TDP1-217ENST00000557782 LIN7BQ9HAP6 207 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 ABCB6Q9NP58 842 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 C11orf16Q9NQ32 467 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 ST7Q9NRC1 585 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 TCEAL9Q9UHQ7 104 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 PPT2Q9UMR5 302 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 TLR6Q9Y2C9 796 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 WASF2Q9Y6W5 498 aa5.14□□□□□ -1.59
TDP1-217ENST00000557782 WNT7AO00755 349 aa5.13□□□□□ -1.59
TDP1-217ENST00000557782 HCLS1P14317 486 aaPredicted RBP5.13□□□□□ -1.59
TDP1-217ENST00000557782 CNGA1P29973 690 aa5.13□□□□□ -1.59
TDP1-217ENST00000557782 GIPRP48546 466 aa5.13□□□□□ -1.59
TDP1-217ENST00000557782 ZNF165P49910 485 aa5.13□□□□□ -1.59
TDP1-217ENST00000557782 SQSTM1Q13501 440 aa5.13□□□□□ -1.59
TDP1-217ENST00000557782 SEZ6Q53EL9 994 aa5.13□□□□□ -1.59
TDP1-217ENST00000557782 KRT26Q7Z3Y9 468 aa5.13□□□□□ -1.59
TDP1-217ENST00000557782 EMID1Q96A84 441 aaPredicted RBP5.13□□□□□ -1.59
TDP1-217ENST00000557782 PLAAQ9Y263 795 aa5.13□□□□□ -1.59
TDP1-217ENST00000557782 GJA3Q9Y6H8 435 aa5.13□□□□□ -1.59
TDP1-217ENST00000557782 PRC1O43663 620 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 EIF3JO75822 258 aaKnown RBP5.12□□□□□ -1.59
TDP1-217ENST00000557782 ZIC2O95409 532 aaPredicted RBP5.12□□□□□ -1.59
TDP1-217ENST00000557782 CELA3AP09093 270 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 VIL1P09327 827 aaKnown RBP5.12□□□□□ -1.59
TDP1-217ENST00000557782 IMPDH2P12268 514 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 MCM4P33991 863 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 CRKP46108 304 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 TBX4P57082 545 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 RPS26P62854 115 aaKnown RBP5.12□□□□□ -1.59
TDP1-217ENST00000557782 KCNC4Q03721 635 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 TYRO3Q06418 890 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 CWF19L2Q2TBE0 894 aaKnown RBP5.12□□□□□ -1.59
TDP1-217ENST00000557782 ARSJQ5FYB0 599 aaPredicted RBP5.12□□□□□ -1.59
TDP1-217ENST00000557782 LARP1BQ659C4 914 aaKnown RBP5.12□□□□□ -1.59
TDP1-217ENST00000557782 TTBK2Q6IQ55 1244 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 AGMOQ6ZNB7 445 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 LRRC69Q6ZNQ3 347 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 CCDC84Q86UT8 332 aaPredicted RBP5.12□□□□□ -1.59
TDP1-217ENST00000557782 TRIM42Q8IWZ5 723 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 FAM169BQ8N8A8 192 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 SGSM3Q96HU1 749 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 MRGPRX2Q96LB1 330 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 CEP63Q96MT8 703 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 LRRC3Q9BY71 257 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 LATS2Q9NRM7 1088 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 KANSL3Q9P2N6 904 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 GABBR1Q9UBS5 961 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 LEMD3Q9Y2U8 911 aa5.12□□□□□ -1.59
TDP1-217ENST00000557782 SPATA31C2B4DYI2 1134 aa5.11□□□□□ -1.59
TDP1-217ENST00000557782 TLR3O15455 904 aaKnown RBP5.11□□□□□ -1.59
TDP1-217ENST00000557782 ASMTLO95671 621 aa5.11□□□□□ -1.59
TDP1-217ENST00000557782 ALDH1A1P00352 501 aa5.11□□□□□ -1.59
TDP1-217ENST00000557782 PHKA2P46019 1235 aa5.11□□□□□ -1.59
TDP1-217ENST00000557782 RNF144AP50876 292 aaPredicted RBP5.11□□□□□ -1.59
TDP1-217ENST00000557782 MPP2Q14168 576 aa5.11□□□□□ -1.59
TDP1-217ENST00000557782 TKFCQ3LXA3 575 aa5.11□□□□□ -1.59
TDP1-217ENST00000557782 PEAR1Q5VY43 1037 aaPredicted RBP5.11□□□□□ -1.59
TDP1-217ENST00000557782 SMC5Q8IY18 1101 aa5.11□□□□□ -1.59
TDP1-217ENST00000557782 ITPKCQ96DU7 683 aa5.11□□□□□ -1.59
TDP1-217ENST00000557782 KLRG1Q96E93 195 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms