RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 PCDH11YQ9BZA8 1340 aa20.86■□□□□ 0.93
XRCC3-218ENST00000557439 RFX7Q2KHR2 1363 aa20.86■□□□□ 0.93
XRCC3-218ENST00000557439 RNF113AO15541 343 aaKnown RBP20.86■□□□□ 0.93
XRCC3-218ENST00000557439 FBXW7Q969H0 707 aa20.86■□□□□ 0.93
XRCC3-218ENST00000557439 GOLPH3LQ9H4A5 285 aa20.86■□□□□ 0.93
XRCC3-218ENST00000557439 DDX19AQ9NUU7 478 aaKnown RBP20.86■□□□□ 0.93
XRCC3-218ENST00000557439 WASHC4Q2M389 1173 aa20.86■□□□□ 0.93
XRCC3-218ENST00000557439 DSCC1Q9BVC3 393 aa20.86■□□□□ 0.93
XRCC3-218ENST00000557439 PDCL3Q9H2J4 239 aa20.86■□□□□ 0.93
XRCC3-218ENST00000557439 CCDC191Q8NCU4 936 aa20.85■□□□□ 0.93
XRCC3-218ENST00000557439 GJB4Q9NTQ9 266 aa20.85■□□□□ 0.93
XRCC3-218ENST00000557439 WDR17Q8IZU2 1322 aa20.85■□□□□ 0.93
XRCC3-218ENST00000557439 FOXP2O15409 715 aa20.85■□□□□ 0.93
XRCC3-218ENST00000557439 PDIA3P30101 505 aaKnown RBP20.85■□□□□ 0.93
XRCC3-218ENST00000557439 GORABQ5T7V8 394 aa20.85■□□□□ 0.93
XRCC3-218ENST00000557439 KIAA1524Q8TCG1 905 aa20.85■□□□□ 0.93
XRCC3-218ENST00000557439 NUP188Q5SRE5 1749 aa20.84■□□□□ 0.93
XRCC3-218ENST00000557439 ZNF165P49910 485 aa20.84■□□□□ 0.93
XRCC3-218ENST00000557439 BRINP3Q76B58 766 aa20.84■□□□□ 0.93
XRCC3-218ENST00000557439 CCDC186Q7Z3E2 898 aa20.84■□□□□ 0.93
XRCC3-218ENST00000557439 DRC7Q8IY82 874 aa20.84■□□□□ 0.93
XRCC3-218ENST00000557439 TRIM5Q9C035 493 aa20.84■□□□□ 0.93
XRCC3-218ENST00000557439 CEP126Q9P2H0 1117 aa20.84■□□□□ 0.93
XRCC3-218ENST00000557439 ILDR1Q86SU0 546 aaPredicted RBP20.84■□□□□ 0.93
XRCC3-218ENST00000557439 XAGE2Q96GT9 111 aa20.84■□□□□ 0.93
XRCC3-218ENST00000557439 KCPQ6ZWJ8 1503 aa20.84■□□□□ 0.93
XRCC3-218ENST00000557439 PDIA4P13667 645 aaKnown RBP20.83■□□□□ 0.93
XRCC3-218ENST00000557439 CCDC57Q2TAC2 916 aa20.83■□□□□ 0.93
XRCC3-218ENST00000557439 C11orf57Q6ZUT1 292 aaPredicted RBP20.83■□□□□ 0.93
XRCC3-218ENST00000557439 CCAR1Q8IX12 1150 aaKnown RBP20.83■□□□□ 0.93
XRCC3-218ENST00000557439 VSIG10Q8N0Z9 540 aa20.83■□□□□ 0.93
XRCC3-218ENST00000557439 DENND2AQ9ULE3 1009 aa20.83■□□□□ 0.93
XRCC3-218ENST00000557439 TTC39AQ5SRH9 613 aa20.83■□□□□ 0.92
XRCC3-218ENST00000557439 RBM43Q6ZSC3 357 aaKnown RBP20.83■□□□□ 0.92
XRCC3-218ENST00000557439 DYNC1I1O14576 645 aa20.82■□□□□ 0.92
XRCC3-218ENST00000557439 GPTP24298 496 aa20.82■□□□□ 0.92
XRCC3-218ENST00000557439 ZAP70P43403 619 aa20.82■□□□□ 0.92
XRCC3-218ENST00000557439 ZSCAN16Q9H4T2 348 aaPredicted RBP20.82■□□□□ 0.92
XRCC3-218ENST00000557439 GPR108Q9NPR9 543 aa20.82■□□□□ 0.92
XRCC3-218ENST00000557439 SPTLC3Q9NUV7 552 aa20.82■□□□□ 0.92
XRCC3-218ENST00000557439 CPDO75976 1380 aa20.82■□□□□ 0.92
XRCC3-218ENST00000557439 HMGB1P09429 215 aaKnown RBP20.82■□□□□ 0.92
XRCC3-218ENST00000557439 FDPSP14324 419 aaKnown RBP20.82■□□□□ 0.92
XRCC3-218ENST00000557439 DNAJC10Q8IXB1 793 aa20.82■□□□□ 0.92
XRCC3-218ENST00000557439 MYRIPQ8NFW9 859 aa20.82■□□□□ 0.92
XRCC3-218ENST00000557439 PUS7LQ9H0K6 701 aaKnown RBP20.82■□□□□ 0.92
XRCC3-218ENST00000557439 ASAP1Q9ULH1 1129 aa20.82■□□□□ 0.92
XRCC3-218ENST00000557439 KAT6BQ8WYB5 2073 aa20.81■□□□□ 0.92
XRCC3-218ENST00000557439 NKX2-3Q8TAU0 364 aa20.81■□□□□ 0.92
XRCC3-218ENST00000557439 CFAP45Q9UL16 551 aa20.81■□□□□ 0.92
XRCC3-218ENST00000557439 ERVV-2B6SEH9 535 aa20.81■□□□□ 0.92
XRCC3-218ENST00000557439 IL2RBP14784 551 aa20.81■□□□□ 0.92
XRCC3-218ENST00000557439 LLPHQ9BRT6 129 aaKnown RBP20.8■□□□□ 0.92
XRCC3-218ENST00000557439 AGXT2Q9BYV1 514 aa20.8■□□□□ 0.92
XRCC3-218ENST00000557439 ZNF75DP51815 510 aa20.8■□□□□ 0.92
XRCC3-218ENST00000557439 TAF7LQ5H9L4 462 aa20.8■□□□□ 0.92
XRCC3-218ENST00000557439 ISCA1Q9BUE6 129 aa20.8■□□□□ 0.92
XRCC3-218ENST00000557439 SALL1Q9NSC2 1324 aa20.79■□□□□ 0.92
XRCC3-218ENST00000557439 FGAP02671 866 aa20.79■□□□□ 0.92
XRCC3-218ENST00000557439 TCIRG1Q13488 830 aa20.79■□□□□ 0.92
XRCC3-218ENST00000557439 POLR3DP05423 398 aaPredicted RBP20.79■□□□□ 0.92
XRCC3-218ENST00000557439 ME1P48163 572 aa20.79■□□□□ 0.92
XRCC3-218ENST00000557439 NAA16Q6N069 864 aaPredicted RBP20.79■□□□□ 0.92
XRCC3-218ENST00000557439 RCOR1Q9UKL0 485 aa20.79■□□□□ 0.92
XRCC3-218ENST00000557439 ABCC6O95255 1503 aa20.79■□□□□ 0.92
XRCC3-218ENST00000557439 CARMIL3Q8ND23 1372 aa20.79■□□□□ 0.92
XRCC3-218ENST00000557439 SNW1Q13573 536 aaKnown RBP20.78■□□□□ 0.92
XRCC3-218ENST00000557439 HLFQ16534 295 aa20.78■□□□□ 0.92
XRCC3-218ENST00000557439 CCDC144BQ3MJ40 725 aa20.78■□□□□ 0.92
XRCC3-218ENST00000557439 CCDC158Q5M9N0 1113 aa20.78■□□□□ 0.92
XRCC3-218ENST00000557439 CCDC144CPQ8IYA2 1237 aa20.78■□□□□ 0.92
XRCC3-218ENST00000557439 NWD2Q9ULI1 1742 aa20.78■□□□□ 0.92
XRCC3-218ENST00000557439 ARID5BQ14865 1188 aa20.78■□□□□ 0.92
XRCC3-218ENST00000557439 TDRD7Q8NHU6 1098 aaKnown RBP20.78■□□□□ 0.92
XRCC3-218ENST00000557439 COL5A2P05997 1499 aaPredicted RBP20.78■□□□□ 0.92
XRCC3-218ENST00000557439 UBR2Q8IWV8 1755 aa20.77■□□□□ 0.92
XRCC3-218ENST00000557439 GOLGA6L6A8MZA4 724 aa20.77■□□□□ 0.92
XRCC3-218ENST00000557439 CIAO1O76071 339 aa20.77■□□□□ 0.92
XRCC3-218ENST00000557439 HMGN5P82970 282 aaKnown RBP20.77■□□□□ 0.92
XRCC3-218ENST00000557439 PLA2G4DQ86XP0 818 aa20.77■□□□□ 0.91
XRCC3-218ENST00000557439 FSIP1Q8NA03 581 aa20.77■□□□□ 0.91
XRCC3-218ENST00000557439 PARP4Q9UKK3 1724 aaKnown RBP20.77■□□□□ 0.91
XRCC3-218ENST00000557439 MYH15Q9Y2K3 1946 aa20.76■□□□□ 0.91
XRCC3-218ENST00000557439 KLF18A0A0U1RQI7 1052 aa20.76■□□□□ 0.91
XRCC3-218ENST00000557439 ZNF710Q8N1W2 664 aa20.76■□□□□ 0.91
XRCC3-218ENST00000557439 TMOD3Q9NYL9 352 aa20.76■□□□□ 0.91
XRCC3-218ENST00000557439 A0A1B0GVL5 298 aa20.76■□□□□ 0.91
XRCC3-218ENST00000557439 PRC1O43663 620 aa20.76■□□□□ 0.91
XRCC3-218ENST00000557439 ANTXR2P58335 489 aa20.76■□□□□ 0.91
XRCC3-218ENST00000557439 EVA1CP58658 441 aa20.76■□□□□ 0.91
XRCC3-218ENST00000557439 BCL11BQ9C0K0 894 aaPredicted RBP20.76■□□□□ 0.91
XRCC3-218ENST00000557439 DCCP43146 1447 aa20.76■□□□□ 0.91
XRCC3-218ENST00000557439 RXRAP19793 462 aa20.75■□□□□ 0.91
XRCC3-218ENST00000557439 IQCB1Q15051 598 aa20.75■□□□□ 0.91
XRCC3-218ENST00000557439 GLIPR1L2Q4G1C9 344 aa20.75■□□□□ 0.91
XRCC3-218ENST00000557439 ZNF274Q96GC6 653 aaPredicted RBP20.75■□□□□ 0.91
XRCC3-218ENST00000557439 GREM2Q9H772 168 aa20.75■□□□□ 0.91
XRCC3-218ENST00000557439 CLIC4Q9Y696 253 aa20.75■□□□□ 0.91
XRCC3-218ENST00000557439 GOLGA8BA8MQT2 603 aa20.75■□□□□ 0.91
XRCC3-218ENST00000557439 NKX1-1Q15270 411 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms