RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 DHX8Q14562 1220 aaKnown RBP12.17□□□□□ -0.46
SUPT16H-207ENST00000557394 CCDC150Q8NCX0 1101 aa12.17□□□□□ -0.46
SUPT16H-207ENST00000557394 CCDC97Q96F63 343 aaPredicted RBP12.17□□□□□ -0.46
SUPT16H-207ENST00000557394 ARHGEF10O15013 1369 aa12.17□□□□□ -0.46
SUPT16H-207ENST00000557394 MAP2P11137 1827 aaKnown RBP12.17□□□□□ -0.46
SUPT16H-207ENST00000557394 ERCC3P19447 782 aa12.16□□□□□ -0.46
SUPT16H-207ENST00000557394 NOM1Q5C9Z4 860 aaKnown RBP12.16□□□□□ -0.46
SUPT16H-207ENST00000557394 FERMT3Q86UX7 667 aa12.16□□□□□ -0.46
SUPT16H-207ENST00000557394 MICAL1Q8TDZ2 1067 aa12.16□□□□□ -0.46
SUPT16H-207ENST00000557394 ADAM21Q9UKJ8 722 aa12.16□□□□□ -0.46
SUPT16H-207ENST00000557394 NUB1Q9Y5A7 615 aa12.16□□□□□ -0.46
SUPT16H-207ENST00000557394 TTC41PQ6P2S7 1318 aa12.16□□□□□ -0.46
SUPT16H-207ENST00000557394 IVLP07476 585 aa12.16□□□□□ -0.46
SUPT16H-207ENST00000557394 FBXW7Q969H0 707 aa12.16□□□□□ -0.46
SUPT16H-207ENST00000557394 CYP46A1Q9Y6A2 500 aa12.16□□□□□ -0.46
SUPT16H-207ENST00000557394 SLC4A2P04920 1241 aa12.15□□□□□ -0.46
SUPT16H-207ENST00000557394 ADCK5Q3MIX3 580 aa12.15□□□□□ -0.46
SUPT16H-207ENST00000557394 ARMCX5Q6P1M9 558 aa12.15□□□□□ -0.46
SUPT16H-207ENST00000557394 BICD2Q8TD16 824 aa12.15□□□□□ -0.46
SUPT16H-207ENST00000557394 TFIP11Q9UBB9 837 aaKnown RBP12.15□□□□□ -0.46
SUPT16H-207ENST00000557394 DNAI1Q9UI46 699 aa12.15□□□□□ -0.46
SUPT16H-207ENST00000557394 DTNBO60941 627 aa12.15□□□□□ -0.46
SUPT16H-207ENST00000557394 LRRFIP1Q32MZ4 808 aaKnown RBP12.15□□□□□ -0.46
SUPT16H-207ENST00000557394 LONRF3Q496Y0 759 aa12.15□□□□□ -0.46
SUPT16H-207ENST00000557394 TTC31Q49AM3 519 aaPredicted RBP12.15□□□□□ -0.46
SUPT16H-207ENST00000557394 TRIM65Q6PJ69 517 aa12.15□□□□□ -0.46
SUPT16H-207ENST00000557394 PACS2Q86VP3 889 aa12.15□□□□□ -0.46
SUPT16H-207ENST00000557394 GPR161Q8N6U8 529 aaKnown RBP12.15□□□□□ -0.46
SUPT16H-207ENST00000557394 NECAB1Q8N987 351 aa12.15□□□□□ -0.46
SUPT16H-207ENST00000557394 JAKMIP1Q96N16 626 aaKnown RBP12.15□□□□□ -0.46
SUPT16H-207ENST00000557394 FUT8Q9BYC5 575 aa12.15□□□□□ -0.46
SUPT16H-207ENST00000557394 TPCN1Q9ULQ1 816 aa12.15□□□□□ -0.46
SUPT16H-207ENST00000557394 BECN2A8MW95 431 aa12.14□□□□□ -0.47
SUPT16H-207ENST00000557394 CCP110O43303 1012 aa12.14□□□□□ -0.47
SUPT16H-207ENST00000557394 ATP2B1P20020 1258 aa12.14□□□□□ -0.47
SUPT16H-207ENST00000557394 FBLN1P23142 703 aa12.14□□□□□ -0.47
SUPT16H-207ENST00000557394 MNS1Q8NEH6 495 aa12.14□□□□□ -0.47
SUPT16H-207ENST00000557394 STRCP1A6NGW2 1772 aa12.14□□□□□ -0.47
SUPT16H-207ENST00000557394 CALRP27797 417 aaKnown RBP12.14□□□□□ -0.47
SUPT16H-207ENST00000557394 CNTROBQ8N137 903 aa12.14□□□□□ -0.47
SUPT16H-207ENST00000557394 CXorf38Q8TB03 319 aa12.14□□□□□ -0.47
SUPT16H-207ENST00000557394 CDK19Q9BWU1 502 aa12.14□□□□□ -0.47
SUPT16H-207ENST00000557394 ANO10Q9NW15 660 aa12.14□□□□□ -0.47
SUPT16H-207ENST00000557394 NALCNQ8IZF0 1738 aa12.14□□□□□ -0.47
SUPT16H-207ENST00000557394 SOS1Q07889 1333 aaPredicted RBP12.13□□□□□ -0.47
SUPT16H-207ENST00000557394 F6X3S4 739 aa12.13□□□□□ -0.47
SUPT16H-207ENST00000557394 WASLO00401 505 aaPredicted RBP12.13□□□□□ -0.47
SUPT16H-207ENST00000557394 MAP4K4O95819 1239 aaPredicted RBP12.13□□□□□ -0.47
SUPT16H-207ENST00000557394 LMAN1P49257 510 aa12.13□□□□□ -0.47
SUPT16H-207ENST00000557394 SLC4A10Q6U841 1118 aa12.13□□□□□ -0.47
SUPT16H-207ENST00000557394 G2E3Q7L622 706 aa12.13□□□□□ -0.47
SUPT16H-207ENST00000557394 SUGP1Q8IWZ8 645 aaKnown RBP12.13□□□□□ -0.47
SUPT16H-207ENST00000557394 MKL1Q969V6 931 aa12.13□□□□□ -0.47
SUPT16H-207ENST00000557394 CALR3Q96L12 384 aaKnown RBP12.13□□□□□ -0.47
SUPT16H-207ENST00000557394 EMILIN1Q9Y6C2 1016 aa12.13□□□□□ -0.47
SUPT16H-207ENST00000557394 PARP3Q9Y6F1 533 aa12.13□□□□□ -0.47
SUPT16H-207ENST00000557394 ATP7BP35670 1465 aa12.13□□□□□ -0.47
SUPT16H-207ENST00000557394 ANKRD62A6NC57 917 aa12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 MAP2K7O14733 419 aa12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 FANCGO15287 622 aa12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 RAB11FIP3O75154 756 aa12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 CPP00450 1065 aa12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 PAX3P23760 479 aa12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 EVCP57679 992 aa12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 RESTQ13127 1097 aa12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 CARD6Q9BX69 1037 aa12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 ALDH8A1Q9H2A2 487 aaPredicted RBP12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 ARFGAP3Q9NP61 516 aa12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 USP42Q9H9J4 1324 aaKnown RBP12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 H3BQF6 201 aa12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 NECTIN1Q15223 517 aa12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 SWT1Q5T5J6 900 aaKnown RBP12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 LARP1Q6PKG0 1096 aaKnown RBP12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 ZNF662Q6ZS27 426 aa12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 RSRC2Q7L4I2 434 aaKnown RBP12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 SYTL4Q96C24 671 aaPredicted RBP12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 SPG7Q9UQ90 795 aa12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 FMN2Q9NZ56 1722 aa12.12□□□□□ -0.47
SUPT16H-207ENST00000557394 SFPQP23246 707 aaKnown RBP eCLIP12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 PTH1RQ03431 593 aa12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 PSME1Q06323 249 aa12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 IRF5Q13568 498 aa12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 ZFYVE27Q5T4F4 411 aa12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 NUTM1Q86Y26 1132 aa12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 CEP57L1Q8IYX8 460 aa12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 SSH3Q8TE77 659 aa12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 CCDC34Q96HJ3 373 aa12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 CEP83Q9Y592 693 aa12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 N4BP2Q86UW6 1770 aaPredicted RBP12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 TOPAZ1Q8N9V7 1692 aa12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 CRB1P82279 1406 aa12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 UNCXA6NJT0 531 aa12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 EIF3CLB5ME19 914 aaKnown RBP12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 CORO7P57737 925 aa12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 PRPF40BQ6NWY9 871 aaKnown RBP12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 CWC27Q6UX04 472 aaKnown RBP12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 LEKR1Q6ZMV7 388 aa12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 AOPEPQ8N6M6 819 aa12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 EIF3CQ99613 913 aaKnown RBP12.11□□□□□ -0.47
SUPT16H-207ENST00000557394 ITSN1Q15811 1721 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms