RNA–Protein interactions for RNA: ENST00000557370.2

MTHFD1-215, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-215ENST00000557370 PHAXQ9H814 394 aaKnown RBP8.66□□□□□ -1.02
MTHFD1-215ENST00000557370 IL1RAPL2Q9NP60 686 aa8.66□□□□□ -1.02
MTHFD1-215ENST00000557370 PDRG1Q9NUG6 133 aa8.66□□□□□ -1.02
MTHFD1-215ENST00000557370 TMEM63CQ9P1W3 806 aa8.66□□□□□ -1.02
MTHFD1-215ENST00000557370 SPG7Q9UQ90 795 aa8.66□□□□□ -1.02
MTHFD1-215ENST00000557370 C4AP0C0L4 1744 aa8.66□□□□□ -1.02
MTHFD1-215ENST00000557370 RPAP1Q9BWH6 1393 aaPredicted RBP8.65□□□□□ -1.02
MTHFD1-215ENST00000557370 PASKQ96RG2 1323 aa8.65□□□□□ -1.02
MTHFD1-215ENST00000557370 GOLGA6L6A8MZA4 724 aa8.65□□□□□ -1.02
MTHFD1-215ENST00000557370 POTECB2RU33 542 aa8.65□□□□□ -1.02
MTHFD1-215ENST00000557370 F13A1P00488 732 aa8.65□□□□□ -1.02
MTHFD1-215ENST00000557370 HMGB1P09429 215 aaKnown RBP8.65□□□□□ -1.02
MTHFD1-215ENST00000557370 NBPF7P0C2Y1 421 aaPredicted RBP8.65□□□□□ -1.02
MTHFD1-215ENST00000557370 CHRNA5P30532 468 aa8.65□□□□□ -1.02
MTHFD1-215ENST00000557370 HMGN5P82970 282 aaKnown RBP8.65□□□□□ -1.02
MTHFD1-215ENST00000557370 KIAA2012Q0VF49 1180 aa8.65□□□□□ -1.02
MTHFD1-215ENST00000557370 LRRFIP1Q32MZ4 808 aaKnown RBP8.65□□□□□ -1.02
MTHFD1-215ENST00000557370 EAPPQ56P03 285 aaPredicted RBP8.65□□□□□ -1.02
MTHFD1-215ENST00000557370 HABP4Q5JVS0 413 aaKnown RBP8.65□□□□□ -1.02
MTHFD1-215ENST00000557370 RUFY3Q7L099 469 aa8.65□□□□□ -1.02
MTHFD1-215ENST00000557370 NUTM1Q86Y26 1132 aa8.65□□□□□ -1.02
MTHFD1-215ENST00000557370 PALD1Q9ULE6 856 aa8.65□□□□□ -1.02
MTHFD1-215ENST00000557370 TNRC18O15417 2968 aaPredicted RBP8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 MRC1P22897 1456 aa8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 KDM6AO15550 1401 aaPredicted RBP8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 SCN11AQ9UI33 1791 aa8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 SYCE3A1L190 88 aa8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 IQCA1LA6NCM1 817 aa8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 KCNJ4P48050 445 aa8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 AK2P54819 239 aa8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 PKP1Q13835 747 aa8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 NECTIN1Q15223 517 aa8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 TRAPPC3LQ5T215 181 aa8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 ATL3Q6DD88 541 aa8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 USP48Q86UV5 1035 aa8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 LINC00116Q8NCU8 138 aa8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 RGS22Q8NE09 1264 aa8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 RAPGEF4Q8WZA2 1011 aa8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 MAP4K1Q92918 833 aa8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 CAPNS2Q96L46 248 aa8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 GPR101Q96P66 508 aaPredicted RBP8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 SCAND2PQ9GZW5 306 aaPredicted RBP8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 USP25Q9UHP3 1055 aa8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 MAP3K2Q9Y2U5 619 aa8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 RTCBQ9Y3I0 505 aaKnown RBP8.64□□□□□ -1.03
MTHFD1-215ENST00000557370 CA12O43570 354 aa8.63□□□□□ -1.03
MTHFD1-215ENST00000557370 PTMAP06454 111 aaKnown RBP8.63□□□□□ -1.03
MTHFD1-215ENST00000557370 TATP17735 454 aaPredicted RBP8.63□□□□□ -1.03
MTHFD1-215ENST00000557370 CASTP20810 708 aaKnown RBP8.63□□□□□ -1.03
MTHFD1-215ENST00000557370 SYT1P21579 422 aa8.63□□□□□ -1.03
MTHFD1-215ENST00000557370 RFC4P35249 363 aa8.63□□□□□ -1.03
MTHFD1-215ENST00000557370 KRT85P78386 507 aa8.63□□□□□ -1.03
MTHFD1-215ENST00000557370 HSP90AA2PQ14568 343 aaPredicted RBP8.63□□□□□ -1.03
MTHFD1-215ENST00000557370 ERFEQ4G0M1 354 aa8.63□□□□□ -1.03
MTHFD1-215ENST00000557370 BLOC1S2Q6QNY1 142 aa8.63□□□□□ -1.03
MTHFD1-215ENST00000557370 CWC27Q6UX04 472 aaKnown RBP8.63□□□□□ -1.03
MTHFD1-215ENST00000557370 NECTIN2Q92692 538 aa8.63□□□□□ -1.03
MTHFD1-215ENST00000557370 UPF3BQ9BZI7 483 aaKnown RBP8.63□□□□□ -1.03
MTHFD1-215ENST00000557370 PDCL3Q9H2J4 239 aa8.63□□□□□ -1.03
MTHFD1-215ENST00000557370 LGR6Q9HBX8 967 aa8.63□□□□□ -1.03
MTHFD1-215ENST00000557370 COPRSQ9NQ92 184 aa8.63□□□□□ -1.03
MTHFD1-215ENST00000557370 CASP8AP2Q9UKL3 1982 aa8.62□□□□□ -1.03
MTHFD1-215ENST00000557370 LOC102724428A0A0B4J2F2 783 aa8.62□□□□□ -1.03
MTHFD1-215ENST00000557370 DYNC1I1O14576 645 aa8.62□□□□□ -1.03
MTHFD1-215ENST00000557370 CCDC192P0DO97 292 aa8.62□□□□□ -1.03
MTHFD1-215ENST00000557370 ATP5JP18859 108 aa8.62□□□□□ -1.03
MTHFD1-215ENST00000557370 SIK1P57059 783 aa8.62□□□□□ -1.03
MTHFD1-215ENST00000557370 DHX8Q14562 1220 aaKnown RBP8.62□□□□□ -1.03
MTHFD1-215ENST00000557370 RIC3Q7Z5B4 369 aa8.62□□□□□ -1.03
MTHFD1-215ENST00000557370 AACSQ86V21 672 aa8.62□□□□□ -1.03
MTHFD1-215ENST00000557370 IFNL2Q8IZJ0 200 aa8.62□□□□□ -1.03
MTHFD1-215ENST00000557370 PRIMPOLQ96LW4 560 aa8.62□□□□□ -1.03
MTHFD1-215ENST00000557370 JAKMIP1Q96N16 626 aaKnown RBP8.62□□□□□ -1.03
MTHFD1-215ENST00000557370 LLPHQ9BRT6 129 aaKnown RBP8.62□□□□□ -1.03
MTHFD1-215ENST00000557370 METTL22Q9BUU2 404 aaPredicted RBP8.62□□□□□ -1.03
MTHFD1-215ENST00000557370 ZSCAN16Q9H4T2 348 aaPredicted RBP8.62□□□□□ -1.03
MTHFD1-215ENST00000557370 GPR108Q9NPR9 543 aa8.62□□□□□ -1.03
MTHFD1-215ENST00000557370 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.62□□□□□ -1.03
MTHFD1-215ENST00000557370 CCDC88AQ3V6T2 1871 aa8.62□□□□□ -1.03
MTHFD1-215ENST00000557370 SPEF2Q9C093 1822 aa8.61□□□□□ -1.03
MTHFD1-215ENST00000557370 RGPD2P0DJD1 1756 aa8.61□□□□□ -1.03
MTHFD1-215ENST00000557370 SNRPA1P09661 255 aaKnown RBP8.61□□□□□ -1.03
MTHFD1-215ENST00000557370 ATP6V1AP38606 617 aa8.61□□□□□ -1.03
MTHFD1-215ENST00000557370 USPL1Q5W0Q7 1092 aa8.61□□□□□ -1.03
MTHFD1-215ENST00000557370 TSHZ3Q63HK5 1081 aa8.61□□□□□ -1.03
MTHFD1-215ENST00000557370 CREB3L3Q68CJ9 461 aa8.61□□□□□ -1.03
MTHFD1-215ENST00000557370 ZNF790Q6PG37 636 aa8.61□□□□□ -1.03
MTHFD1-215ENST00000557370 UBE2Q2Q8WVN8 375 aa8.61□□□□□ -1.03
MTHFD1-215ENST00000557370 SLC52A2Q9HAB3 445 aa8.61□□□□□ -1.03
MTHFD1-215ENST00000557370 DDX19AQ9NUU7 478 aaKnown RBP8.61□□□□□ -1.03
MTHFD1-215ENST00000557370 FBXO3Q9UK99 471 aa8.61□□□□□ -1.03
MTHFD1-215ENST00000557370 CFAP45Q9UL16 551 aa8.61□□□□□ -1.03
MTHFD1-215ENST00000557370 MED23Q9ULK4 1368 aa8.61□□□□□ -1.03
MTHFD1-215ENST00000557370 TCHHQ07283 1943 aa8.6□□□□□ -1.03
MTHFD1-215ENST00000557370 MEGF6O75095 1541 aa8.6□□□□□ -1.03
MTHFD1-215ENST00000557370 PCDH11XQ9BZA7 1347 aa8.6□□□□□ -1.03
MTHFD1-215ENST00000557370 PCDH11YQ9BZA8 1340 aa8.6□□□□□ -1.03
MTHFD1-215ENST00000557370 GOLGA6L4A6NEF3 574 aa8.6□□□□□ -1.03
MTHFD1-215ENST00000557370 CTAGE5O15320 804 aa8.6□□□□□ -1.03
MTHFD1-215ENST00000557370 DDNO94850 711 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms