RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 AMPD1P23109 780 aa7.1□□□□□ -1.27
SCFD1-223ENST00000557076 SCNN1DP51172 638 aa7.1□□□□□ -1.27
SCFD1-223ENST00000557076 VAC14Q08AM6 782 aa7.1□□□□□ -1.27
SCFD1-223ENST00000557076 STRN4Q9NRL3 753 aa7.1□□□□□ -1.27
SCFD1-223ENST00000557076 USP35Q9P2H5 1018 aa7.1□□□□□ -1.27
SCFD1-223ENST00000557076 GGA1Q9UJY5 639 aa7.1□□□□□ -1.27
SCFD1-223ENST00000557076 PCDHGC4Q9Y5F7 938 aa7.1□□□□□ -1.27
SCFD1-223ENST00000557076 RGPD1P0DJD0 1748 aa7.1□□□□□ -1.27
SCFD1-223ENST00000557076 GPRASP1Q5JY77 1395 aa7.09□□□□□ -1.27
SCFD1-223ENST00000557076 C2CD2LO14523 706 aa7.09□□□□□ -1.27
SCFD1-223ENST00000557076 ATP4AP20648 1035 aa7.09□□□□□ -1.27
SCFD1-223ENST00000557076 SMTNP53814 917 aa7.09□□□□□ -1.27
SCFD1-223ENST00000557076 GPR162Q16538 588 aa7.09□□□□□ -1.27
SCFD1-223ENST00000557076 PLPP7Q8NBV4 271 aa7.09□□□□□ -1.27
SCFD1-223ENST00000557076 MTFR1LQ9H019 292 aa7.09□□□□□ -1.27
SCFD1-223ENST00000557076 DNAAF2Q9NVR5 837 aaKnown RBP7.09□□□□□ -1.27
SCFD1-223ENST00000557076 NRXN1Q9ULB1 1477 aa7.09□□□□□ -1.27
SCFD1-223ENST00000557076 KRBA1A5PL33 1030 aa7.08□□□□□ -1.28
SCFD1-223ENST00000557076 GNB5O14775 395 aa7.08□□□□□ -1.28
SCFD1-223ENST00000557076 EPXP11678 715 aa7.08□□□□□ -1.28
SCFD1-223ENST00000557076 ABL2P42684 1182 aa7.08□□□□□ -1.28
SCFD1-223ENST00000557076 CTBSQ01459 385 aa7.08□□□□□ -1.28
SCFD1-223ENST00000557076 SEMA3FQ13275 785 aa7.08□□□□□ -1.28
SCFD1-223ENST00000557076 CHRNA2Q15822 529 aa7.08□□□□□ -1.28
SCFD1-223ENST00000557076 SLC15A2Q16348 729 aa7.08□□□□□ -1.28
SCFD1-223ENST00000557076 NBPF1Q3BBV0 1214 aa7.08□□□□□ -1.28
SCFD1-223ENST00000557076 ARXQ96QS3 562 aa7.08□□□□□ -1.28
SCFD1-223ENST00000557076 ZCCHC2Q9C0B9 1178 aaKnown RBP7.08□□□□□ -1.28
SCFD1-223ENST00000557076 C14orf93Q9H972 538 aaKnown RBP7.08□□□□□ -1.28
SCFD1-223ENST00000557076 GDPD2Q9HCC8 539 aa7.08□□□□□ -1.28
SCFD1-223ENST00000557076 ADGRB2O60241 1585 aa7.08□□□□□ -1.28
SCFD1-223ENST00000557076 ACIN1Q9UKV3 1341 aaKnown RBP7.07□□□□□ -1.28
SCFD1-223ENST00000557076 ATXN7O15265 892 aaPredicted RBP7.07□□□□□ -1.28
SCFD1-223ENST00000557076 COL8A1P27658 744 aa7.07□□□□□ -1.28
SCFD1-223ENST00000557076 ZC3H6P61129 1189 aaKnown RBP7.07□□□□□ -1.28
SCFD1-223ENST00000557076 GRIN2CQ14957 1233 aa7.07□□□□□ -1.28
SCFD1-223ENST00000557076 RGL3Q3MIN7 710 aa7.07□□□□□ -1.28
SCFD1-223ENST00000557076 LARP1Q6PKG0 1096 aaKnown RBP7.07□□□□□ -1.28
SCFD1-223ENST00000557076 LINC00114Q6XXX2 140 aa7.07□□□□□ -1.28
SCFD1-223ENST00000557076 AIDAQ96BJ3 306 aa7.07□□□□□ -1.28
SCFD1-223ENST00000557076 AVENQ9NQS1 362 aaPredicted RBP7.07□□□□□ -1.28
SCFD1-223ENST00000557076 STK32BQ9NY57 414 aa7.07□□□□□ -1.28
SCFD1-223ENST00000557076 ZDHHC3Q9NYG2 299 aa7.07□□□□□ -1.28
SCFD1-223ENST00000557076 NOP53Q9NZM5 478 aaKnown RBP7.07□□□□□ -1.28
SCFD1-223ENST00000557076 KIAA0232Q92628 1395 aa7.07□□□□□ -1.28
SCFD1-223ENST00000557076 MAP3K5Q99683 1374 aa7.07□□□□□ -1.28
SCFD1-223ENST00000557076 ANKRD30BQ9BXX2 1392 aa7.07□□□□□ -1.28
SCFD1-223ENST00000557076 K7ELQ4 463 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-223ENST00000557076 HSPA6P17066 643 aa7.06□□□□□ -1.28
SCFD1-223ENST00000557076 HOXB4P17483 251 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-223ENST00000557076 TATP17735 454 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-223ENST00000557076 ITGAEP38570 1179 aa7.06□□□□□ -1.28
SCFD1-223ENST00000557076 MTFR1Q15390 333 aa7.06□□□□□ -1.28
SCFD1-223ENST00000557076 NGDNQ8NEJ9 315 aaKnown RBP7.06□□□□□ -1.28
SCFD1-223ENST00000557076 BTBD6Q96KE9 485 aa7.06□□□□□ -1.28
SCFD1-223ENST00000557076 SLC4A9Q96Q91 983 aa7.06□□□□□ -1.28
SCFD1-223ENST00000557076 PRAM1Q96QH2 718 aa7.06□□□□□ -1.28
SCFD1-223ENST00000557076 DHX57Q6P158 1386 aaKnown RBP7.06□□□□□ -1.28
SCFD1-223ENST00000557076 THSD7AQ9UPZ6 1657 aa7.06□□□□□ -1.28
SCFD1-223ENST00000557076 TNS1Q9HBL0 1735 aaKnown RBP7.05□□□□□ -1.28
SCFD1-223ENST00000557076 YTHDC2Q9H6S0 1430 aaKnown RBP7.05□□□□□ -1.28
SCFD1-223ENST00000557076 A0A1W2PNR3 127 aa7.05□□□□□ -1.28
SCFD1-223ENST00000557076 A6NJY4 79 aa7.05□□□□□ -1.28
SCFD1-223ENST00000557076 NEURL1BA8MQ27 555 aa7.05□□□□□ -1.28
SCFD1-223ENST00000557076 CDK2AP1O14519 115 aa7.05□□□□□ -1.28
SCFD1-223ENST00000557076 ADH6P28332 368 aa7.05□□□□□ -1.28
SCFD1-223ENST00000557076 DGKGP49619 791 aa7.05□□□□□ -1.28
SCFD1-223ENST00000557076 TXNRD1Q16881 649 aa7.05□□□□□ -1.28
SCFD1-223ENST00000557076 ARSJQ5FYB0 599 aaPredicted RBP7.05□□□□□ -1.28
SCFD1-223ENST00000557076 POGKQ9P215 609 aa7.05□□□□□ -1.28
SCFD1-223ENST00000557076 ANKARQ7Z5J8 1434 aa7.04□□□□□ -1.28
SCFD1-223ENST00000557076 KIF1AQ12756 1690 aa7.04□□□□□ -1.28
SCFD1-223ENST00000557076 PLCH1Q4KWH8 1693 aa7.04□□□□□ -1.28
SCFD1-223ENST00000557076 TMEM229AB2RXF0 380 aa7.04□□□□□ -1.28
SCFD1-223ENST00000557076 GRIN3BO60391 1043 aa7.04□□□□□ -1.28
SCFD1-223ENST00000557076 MAPTP10636 758 aaKnown RBP7.04□□□□□ -1.28
SCFD1-223ENST00000557076 TNP2Q05952 138 aa7.04□□□□□ -1.28
SCFD1-223ENST00000557076 SAFB2Q14151 953 aaKnown RBP eCLIP7.04□□□□□ -1.28
SCFD1-223ENST00000557076 PTF1AQ7RTS3 328 aa7.04□□□□□ -1.28
SCFD1-223ENST00000557076 SERTAD1Q9UHV2 236 aa7.04□□□□□ -1.28
SCFD1-223ENST00000557076 COL14A1Q05707 1796 aaKnown RBP7.04□□□□□ -1.28
SCFD1-223ENST00000557076 CLTCL1P53675 1640 aa7.04□□□□□ -1.28
SCFD1-223ENST00000557076 DCDC2BA2VCK2 349 aa7.03□□□□□ -1.28
SCFD1-223ENST00000557076 BACH1O14867 736 aa7.03□□□□□ -1.28
SCFD1-223ENST00000557076 LZTS3O60299 673 aaPredicted RBP7.03□□□□□ -1.28
SCFD1-223ENST00000557076 FAM157BP0CG42 384 aa7.03□□□□□ -1.28
SCFD1-223ENST00000557076 DDB1Q16531 1140 aa7.03□□□□□ -1.28
SCFD1-223ENST00000557076 EML3Q32P44 896 aa7.03□□□□□ -1.28
SCFD1-223ENST00000557076 TPRNQ4KMQ1 711 aa7.03□□□□□ -1.28
SCFD1-223ENST00000557076 ZNF295-AS1Q8N0V1 137 aa7.03□□□□□ -1.28
SCFD1-223ENST00000557076 SUV39H2Q9H5I1 410 aa7.03□□□□□ -1.28
SCFD1-223ENST00000557076 CABP1Q9NZU7 370 aa7.03□□□□□ -1.28
SCFD1-223ENST00000557076 IQSEC3Q9UPP2 1182 aaPredicted RBP7.03□□□□□ -1.28
SCFD1-223ENST00000557076 GJA3Q9Y6H8 435 aa7.03□□□□□ -1.28
SCFD1-223ENST00000557076 CAMTA1Q9Y6Y1 1673 aa7.03□□□□□ -1.28
SCFD1-223ENST00000557076 PRR36Q9H6K5 1346 aa7.02□□□□□ -1.28
SCFD1-223ENST00000557076 BCL9O00512 1426 aa7.02□□□□□ -1.29
SCFD1-223ENST00000557076 SSH2Q76I76 1423 aa7.02□□□□□ -1.29
SCFD1-223ENST00000557076 NRAPQ86VF7 1730 aa7.02□□□□□ -1.29
SCFD1-223ENST00000557076 CHD4Q14839 1912 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms