RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 SRGNP10124 158 aa13.11□□□□□ -0.31
LINC01550-206ENST00000556462 NMIQ13287 307 aaPredicted RBP13.11□□□□□ -0.31
LINC01550-206ENST00000556462 RUFY2Q8WXA3 655 aa13.11□□□□□ -0.31
LINC01550-206ENST00000556462 BBOX1O75936 387 aa13.11□□□□□ -0.31
LINC01550-206ENST00000556462 UQCRFS1P1P0C7P4 283 aa13.11□□□□□ -0.31
LINC01550-206ENST00000556462 TICAM2Q86XR7 235 aa13.11□□□□□ -0.31
LINC01550-206ENST00000556462 ANO2Q9NQ90 1003 aa13.11□□□□□ -0.31
LINC01550-206ENST00000556462 RFX7Q2KHR2 1363 aa13.1□□□□□ -0.31
LINC01550-206ENST00000556462 A0A0D9SFI3 127 aa13.1□□□□□ -0.31
LINC01550-206ENST00000556462 EPB41L2O43491 1005 aaKnown RBP13.1□□□□□ -0.31
LINC01550-206ENST00000556462 CYP2E1P05181 493 aaPredicted RBP13.1□□□□□ -0.31
LINC01550-206ENST00000556462 HMG20BQ9P0W2 317 aa13.1□□□□□ -0.31
LINC01550-206ENST00000556462 ARAP2Q8WZ64 1704 aa13.1□□□□□ -0.31
LINC01550-206ENST00000556462 ANKRD31Q8N7Z5 1873 aa13.09□□□□□ -0.31
LINC01550-206ENST00000556462 PDE6BP35913 854 aa13.09□□□□□ -0.31
LINC01550-206ENST00000556462 RASGRF1Q13972 1273 aa13.09□□□□□ -0.31
LINC01550-206ENST00000556462 FAM84BQ96KN1 310 aaPredicted RBP13.09□□□□□ -0.31
LINC01550-206ENST00000556462 LSG1Q9H089 658 aaKnown RBP13.09□□□□□ -0.31
LINC01550-206ENST00000556462 AKAP11Q9UKA4 1901 aa13.09□□□□□ -0.31
LINC01550-206ENST00000556462 A0A1B0GUL6 1792 aa13.09□□□□□ -0.31
LINC01550-206ENST00000556462 ZNF804BA4D1E1 1349 aa13.09□□□□□ -0.31
LINC01550-206ENST00000556462 KLRK1P26718 216 aa13.09□□□□□ -0.31
LINC01550-206ENST00000556462 GYG1P46976 350 aa13.09□□□□□ -0.31
LINC01550-206ENST00000556462 IRS2Q9Y4H2 1338 aa13.08□□□□□ -0.31
LINC01550-206ENST00000556462 NPR1P16066 1061 aa13.08□□□□□ -0.32
LINC01550-206ENST00000556462 SLFNL1Q499Z3 407 aa13.08□□□□□ -0.32
LINC01550-206ENST00000556462 FBXO33Q7Z6M2 555 aa13.08□□□□□ -0.32
LINC01550-206ENST00000556462 SPATA5Q8NB90 893 aa13.08□□□□□ -0.32
LINC01550-206ENST00000556462 SLC16A10Q8TF71 515 aa13.08□□□□□ -0.32
LINC01550-206ENST00000556462 RAD50Q92878 1312 aa13.08□□□□□ -0.32
LINC01550-206ENST00000556462 ZNF589Q86UQ0 364 aaPredicted RBP13.08□□□□□ -0.32
LINC01550-206ENST00000556462 UPF1Q92900 1129 aaKnown RBP eCLIP13.08□□□□□ -0.32
LINC01550-206ENST00000556462 DDRGK1Q96HY6 314 aa13.08□□□□□ -0.32
LINC01550-206ENST00000556462 SEC62Q99442 399 aaKnown RBP13.08□□□□□ -0.32
LINC01550-206ENST00000556462 ANKIB1Q9P2G1 1089 aa13.08□□□□□ -0.32
LINC01550-206ENST00000556462 LEMD3Q9Y2U8 911 aa13.08□□□□□ -0.32
LINC01550-206ENST00000556462 XDHP47989 1333 aa13.07□□□□□ -0.32
LINC01550-206ENST00000556462 MED23Q9ULK4 1368 aa13.07□□□□□ -0.32
LINC01550-206ENST00000556462 KCNJ4P48050 445 aa13.07□□□□□ -0.32
LINC01550-206ENST00000556462 GPSM2P81274 684 aa13.07□□□□□ -0.32
LINC01550-206ENST00000556462 PTH1RQ03431 593 aa13.07□□□□□ -0.32
LINC01550-206ENST00000556462 CAVIN4Q5BKX8 364 aa13.07□□□□□ -0.32
LINC01550-206ENST00000556462 ZMYM1Q5SVZ6 1142 aa13.07□□□□□ -0.32
LINC01550-206ENST00000556462 TXNRD3Q86VQ6 643 aa13.07□□□□□ -0.32
LINC01550-206ENST00000556462 PIH1D3Q9NQM4 214 aaKnown RBP13.07□□□□□ -0.32
LINC01550-206ENST00000556462 RNF113AO15541 343 aaKnown RBP13.06□□□□□ -0.32
LINC01550-206ENST00000556462 ALDH1B1P30837 517 aa13.06□□□□□ -0.32
LINC01550-206ENST00000556462 TTF1Q15361 905 aaPredicted RBP13.06□□□□□ -0.32
LINC01550-206ENST00000556462 MCMDC2Q4G0Z9 681 aa13.06□□□□□ -0.32
LINC01550-206ENST00000556462 KIAA1211Q6ZU35 1233 aa13.06□□□□□ -0.32
LINC01550-206ENST00000556462 MASTLQ96GX5 879 aa13.06□□□□□ -0.32
LINC01550-206ENST00000556462 HSPA4P34932 840 aa13.06□□□□□ -0.32
LINC01550-206ENST00000556462 TMC4Q7Z404 712 aa13.06□□□□□ -0.32
LINC01550-206ENST00000556462 SP8Q8IXZ3 490 aa13.06□□□□□ -0.32
LINC01550-206ENST00000556462 HELLSQ9NRZ9 838 aa13.06□□□□□ -0.32
LINC01550-206ENST00000556462 PODXL2Q9NZ53 605 aa13.06□□□□□ -0.32
LINC01550-206ENST00000556462 NSFL1CQ9UNZ2 370 aaKnown RBP13.06□□□□□ -0.32
LINC01550-206ENST00000556462 IQSEC3Q9UPP2 1182 aaPredicted RBP13.06□□□□□ -0.32
LINC01550-206ENST00000556462 PPEF1O14829 653 aaPredicted RBP13.05□□□□□ -0.32
LINC01550-206ENST00000556462 ZFYP08048 801 aaPredicted RBP13.05□□□□□ -0.32
LINC01550-206ENST00000556462 HIBADHP31937 336 aaKnown RBP13.05□□□□□ -0.32
LINC01550-206ENST00000556462 MAP4K1Q92918 833 aa13.05□□□□□ -0.32
LINC01550-206ENST00000556462 IL17RAQ96F46 866 aa13.05□□□□□ -0.32
LINC01550-206ENST00000556462 GNL3LQ9NVN8 582 aaKnown RBP13.05□□□□□ -0.32
LINC01550-206ENST00000556462 PALD1Q9ULE6 856 aa13.05□□□□□ -0.32
LINC01550-206ENST00000556462 ATP6V0A2Q9Y487 856 aa13.05□□□□□ -0.32
LINC01550-206ENST00000556462 CCDC171Q6TFL3 1326 aa13.05□□□□□ -0.32
LINC01550-206ENST00000556462 LRRFIP1Q32MZ4 808 aaKnown RBP13.04□□□□□ -0.32
LINC01550-206ENST00000556462 CCDC129Q6ZRS4 1044 aa13.04□□□□□ -0.32
LINC01550-206ENST00000556462 C15orf52Q6ZUT6 534 aaKnown RBP13.04□□□□□ -0.32
LINC01550-206ENST00000556462 VPS37DQ86XT2 251 aa13.04□□□□□ -0.32
LINC01550-206ENST00000556462 C2CD5Q86YS7 1000 aa13.04□□□□□ -0.32
LINC01550-206ENST00000556462 OSBP2Q969R2 916 aa13.04□□□□□ -0.32
LINC01550-206ENST00000556462 GOLGB1Q14789 3259 aaKnown RBP13.04□□□□□ -0.32
LINC01550-206ENST00000556462 H0YIN7 160 aa13.04□□□□□ -0.32
LINC01550-206ENST00000556462 ZBTB22O15209 634 aa13.04□□□□□ -0.32
LINC01550-206ENST00000556462 ATP2B4P23634 1241 aa13.04□□□□□ -0.32
LINC01550-206ENST00000556462 ADD2P35612 726 aa13.04□□□□□ -0.32
LINC01550-206ENST00000556462 POLLQ9UGP5 575 aa13.04□□□□□ -0.32
LINC01550-206ENST00000556462 IDH1O75874 414 aaKnown RBP13.03□□□□□ -0.32
LINC01550-206ENST00000556462 MCCP23508 829 aa13.03□□□□□ -0.32
LINC01550-206ENST00000556462 CHRNA5P30532 468 aa13.03□□□□□ -0.32
LINC01550-206ENST00000556462 SLC4A3P48751 1232 aa13.03□□□□□ -0.32
LINC01550-206ENST00000556462 ANAPC15P60006 121 aa13.03□□□□□ -0.32
LINC01550-206ENST00000556462 NECTIN1Q15223 517 aa13.03□□□□□ -0.32
LINC01550-206ENST00000556462 SLC9C2Q5TAH2 1124 aa13.03□□□□□ -0.32
LINC01550-206ENST00000556462 STYK1Q6J9G0 422 aa13.03□□□□□ -0.32
LINC01550-206ENST00000556462 ZNF622Q969S3 477 aaKnown RBP eCLIP13.03□□□□□ -0.32
LINC01550-206ENST00000556462 TBC1D2Q9BYX2 928 aa13.03□□□□□ -0.32
LINC01550-206ENST00000556462 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.03□□□□□ -0.32
LINC01550-206ENST00000556462 COL11A2P13942 1736 aaPredicted RBP13.03□□□□□ -0.32
LINC01550-206ENST00000556462 COL1A1P02452 1464 aaPredicted RBP13.03□□□□□ -0.32
LINC01550-206ENST00000556462 SEMA3EO15041 775 aa13.03□□□□□ -0.32
LINC01550-206ENST00000556462 OLFM4Q6UX06 510 aa13.03□□□□□ -0.32
LINC01550-206ENST00000556462 TBC1D16Q8TBP0 767 aa13.03□□□□□ -0.32
LINC01550-206ENST00000556462 APPBP2Q92624 585 aa13.03□□□□□ -0.32
LINC01550-206ENST00000556462 GPR101Q96P66 508 aaPredicted RBP13.03□□□□□ -0.32
LINC01550-206ENST00000556462 PUS7LQ9H0K6 701 aaKnown RBP13.03□□□□□ -0.32
LINC01550-206ENST00000556462 GGA1Q9UJY5 639 aa13.03□□□□□ -0.32
LINC01550-206ENST00000556462 WWC3Q9ULE0 1092 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms