RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 JCADQ9P266 1359 aa6.01□□□□□ -1.45
TMEM260-210ENST00000556422 BAG4O95429 457 aaKnown RBP6.01□□□□□ -1.45
TMEM260-210ENST00000556422 COL9A3Q14050 684 aaPredicted RBP6.01□□□□□ -1.45
TMEM260-210ENST00000556422 FAM227BQ96M60 508 aa6.01□□□□□ -1.45
TMEM260-210ENST00000556422 SLC4A9Q96Q91 983 aa6.01□□□□□ -1.45
TMEM260-210ENST00000556422 MED23Q9ULK4 1368 aa6.01□□□□□ -1.45
TMEM260-210ENST00000556422 EVA1CP58658 441 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 SLC20A2Q08357 652 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 MTA1Q13330 715 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 ZBTB3Q9H5J0 574 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 WDR70Q9NW82 654 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 MYH14Q7Z406 1995 aaKnown RBP6□□□□□ -1.45
TMEM260-210ENST00000556422 A0A0D9SFI3 127 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 TPM3P06753 285 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 TFCP2Q12800 502 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 SF3A1Q15459 793 aaKnown RBP6□□□□□ -1.45
TMEM260-210ENST00000556422 TNNI3KQ59H18 835 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 LRCH2Q5VUJ6 765 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 LMBR1LQ6UX01 489 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 DDX46Q7L014 1031 aaKnown RBP6□□□□□ -1.45
TMEM260-210ENST00000556422 ATG9AQ7Z3C6 839 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 KCNB2Q92953 911 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 EDC3Q96F86 508 aaKnown RBP6□□□□□ -1.45
TMEM260-210ENST00000556422 CHAMP1Q96JM3 812 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 GBP4Q96PP9 640 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 ATG3Q9NT62 314 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 FPGT-TNNI3KV9GXZ4 949 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 SLIT2O94813 1529 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 ADCK5Q3MIX3 580 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 LONRF3Q496Y0 759 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 DNAJC14Q6Y2X3 702 aaPredicted RBP6□□□□□ -1.45
TMEM260-210ENST00000556422 ARHGEF1Q92888 912 aaKnown RBP6□□□□□ -1.45
TMEM260-210ENST00000556422 BOLA2Q9H3K6 86 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 TMOD3Q9NYL9 352 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 ANAPC4Q9UJX5 808 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 MYH7P12883 1935 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 CICQ96RK0 1608 aaPredicted RBP6□□□□□ -1.45
TMEM260-210ENST00000556422 MYO5AQ9Y4I1 1855 aaKnown RBP6□□□□□ -1.45
TMEM260-210ENST00000556422 RREB1Q92766 1687 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 AKAP11Q9UKA4 1901 aa6□□□□□ -1.45
TMEM260-210ENST00000556422 TESPA1A2RU30 521 aaPredicted RBP5.99□□□□□ -1.45
TMEM260-210ENST00000556422 CHGBP05060 677 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 HSPA1LP34931 641 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 MCM2P49736 904 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 NECTIN1Q15223 517 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 GPATCH3Q96I76 525 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 ISCA1Q9BUE6 129 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 CWC25Q9NXE8 425 aaPredicted RBP5.99□□□□□ -1.45
TMEM260-210ENST00000556422 CTDP1Q9Y5B0 961 aaPredicted RBP5.99□□□□□ -1.45
TMEM260-210ENST00000556422 NDUFB9Q9Y6M9 179 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 CCDC171Q6TFL3 1326 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 SPEF2Q9C093 1822 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 STK10O94804 968 aaKnown RBP5.99□□□□□ -1.45
TMEM260-210ENST00000556422 NUCB2P80303 420 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 NMIQ13287 307 aaPredicted RBP5.99□□□□□ -1.45
TMEM260-210ENST00000556422 ZNF589Q86UQ0 364 aaPredicted RBP5.99□□□□□ -1.45
TMEM260-210ENST00000556422 DNAJC10Q8IXB1 793 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 CCDC191Q8NCU4 936 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 INTS4Q96HW7 963 aaKnown RBP5.99□□□□□ -1.45
TMEM260-210ENST00000556422 DIAPH3Q9NSV4 1193 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 CASZ1Q86V15 1759 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 ZNF609O15014 1411 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 RPAP1Q9BWH6 1393 aaPredicted RBP5.99□□□□□ -1.45
TMEM260-210ENST00000556422 CPA1P15085 419 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 SETDB1Q15047 1291 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 DBNDD2Q9BQY9 259 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 TAF6LQ9Y6J9 622 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 NWD2Q9ULI1 1742 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 H0YHG0 523 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 ATP5JP18859 108 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 AK2P54819 239 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 SARNPP82979 210 aaKnown RBP5.99□□□□□ -1.45
TMEM260-210ENST00000556422 CT47A1Q5JQC4 288 aaPredicted RBP5.99□□□□□ -1.45
TMEM260-210ENST00000556422 RUFY3Q7L099 469 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 MAP4K1Q92918 833 aa5.99□□□□□ -1.45
TMEM260-210ENST00000556422 NUCKS1Q9H1E3 243 aaKnown RBP5.99□□□□□ -1.45
TMEM260-210ENST00000556422 BSDC1Q9NW68 430 aaPredicted RBP5.99□□□□□ -1.45
TMEM260-210ENST00000556422 LARGE1O95461 756 aa5.98□□□□□ -1.45
TMEM260-210ENST00000556422 KDM4CQ9H3R0 1056 aa5.98□□□□□ -1.45
TMEM260-210ENST00000556422 LMBRD1Q9NUN5 540 aa5.98□□□□□ -1.45
TMEM260-210ENST00000556422 COL5A3P25940 1745 aaPredicted RBP5.98□□□□□ -1.45
TMEM260-210ENST00000556422 ST3GAL1Q11201 340 aa5.98□□□□□ -1.45
TMEM260-210ENST00000556422 LRRC24Q50LG9 513 aa5.98□□□□□ -1.45
TMEM260-210ENST00000556422 PRPF40BQ6NWY9 871 aaKnown RBP5.98□□□□□ -1.45
TMEM260-210ENST00000556422 GAS2L3Q86XJ1 694 aa5.98□□□□□ -1.45
TMEM260-210ENST00000556422 ZNF594Q96JF6 807 aaPredicted RBP5.98□□□□□ -1.45
TMEM260-210ENST00000556422 TIGD1Q96MW7 591 aa5.98□□□□□ -1.45
TMEM260-210ENST00000556422 NUB1Q9Y5A7 615 aa5.98□□□□□ -1.45
TMEM260-210ENST00000556422 DDX60Q8IY21 1712 aaKnown RBP5.98□□□□□ -1.45
TMEM260-210ENST00000556422 IPO7O95373 1038 aaKnown RBP5.98□□□□□ -1.45
TMEM260-210ENST00000556422 XRCC6P12956 609 aaKnown RBP eCLIP5.98□□□□□ -1.45
TMEM260-210ENST00000556422 TCIRG1Q13488 830 aa5.98□□□□□ -1.45
TMEM260-210ENST00000556422 PROM2Q8N271 834 aa5.98□□□□□ -1.45
TMEM260-210ENST00000556422 RUFY2Q8WXA3 655 aa5.98□□□□□ -1.45
TMEM260-210ENST00000556422 LARP6Q9BRS8 491 aaKnown RBP5.98□□□□□ -1.45
TMEM260-210ENST00000556422 NBPF3Q9H094 633 aa5.98□□□□□ -1.45
TMEM260-210ENST00000556422 EFCC1Q9HA90 598 aa5.98□□□□□ -1.45
TMEM260-210ENST00000556422 ZSWIM6Q9HCJ5 1215 aa5.98□□□□□ -1.45
TMEM260-210ENST00000556422 RBM8AQ9Y5S9 174 aaKnown RBP5.98□□□□□ -1.45
TMEM260-210ENST00000556422 LRP5O75197 1615 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms