RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 ATP4AP20648 1035 aa6.6□□□□□ -1.35
ATXN3-238ENST00000556288 PDE4CQ08493 712 aa6.6□□□□□ -1.35
ATXN3-238ENST00000556288 EFHC2Q5JST6 749 aa6.6□□□□□ -1.35
ATXN3-238ENST00000556288 C1orf53Q5VUE5 145 aa6.6□□□□□ -1.35
ATXN3-238ENST00000556288 POTEAQ6S8J7 498 aa6.6□□□□□ -1.35
ATXN3-238ENST00000556288 ALDH16A1Q8IZ83 802 aa6.6□□□□□ -1.35
ATXN3-238ENST00000556288 GMCL1Q96IK5 515 aa6.6□□□□□ -1.35
ATXN3-238ENST00000556288 NUCKS1Q9H1E3 243 aaKnown RBP6.6□□□□□ -1.35
ATXN3-238ENST00000556288 NEUROD4Q9HD90 331 aa6.6□□□□□ -1.35
ATXN3-238ENST00000556288 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.6□□□□□ -1.35
ATXN3-238ENST00000556288 CXXC1Q9P0U4 656 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-238ENST00000556288 USTQ9Y2C2 406 aa6.6□□□□□ -1.35
ATXN3-238ENST00000556288 GJA3Q9Y6H8 435 aa6.6□□□□□ -1.35
ATXN3-238ENST00000556288 ROBO1Q9Y6N7 1651 aa6.6□□□□□ -1.35
ATXN3-238ENST00000556288 IQSEC2Q5JU85 1478 aa6.6□□□□□ -1.35
ATXN3-238ENST00000556288 NALCNQ8IZF0 1738 aa6.59□□□□□ -1.35
ATXN3-238ENST00000556288 TONSLQ96HA7 1378 aa6.59□□□□□ -1.35
ATXN3-238ENST00000556288 PIK3R4Q99570 1358 aa6.59□□□□□ -1.35
ATXN3-238ENST00000556288 A0A1W2PNR3 127 aa6.59□□□□□ -1.35
ATXN3-238ENST00000556288 KRT76Q01546 638 aa6.59□□□□□ -1.35
ATXN3-238ENST00000556288 FKBP5Q13451 457 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-238ENST00000556288 FOXR1Q6PIV2 292 aa6.59□□□□□ -1.35
ATXN3-238ENST00000556288 RHPN1Q8TCX5 695 aa6.59□□□□□ -1.35
ATXN3-238ENST00000556288 NANOS1Q8WY41 292 aaKnown RBP6.59□□□□□ -1.35
ATXN3-238ENST00000556288 GTPBP3Q969Y2 492 aaKnown RBP6.59□□□□□ -1.35
ATXN3-238ENST00000556288 ZIC5Q96T25 663 aa6.59□□□□□ -1.35
ATXN3-238ENST00000556288 MKNK1Q9BUB5 465 aa6.59□□□□□ -1.35
ATXN3-238ENST00000556288 HIRIP3Q9BW71 556 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-238ENST00000556288 NWD1Q149M9 1564 aa6.59□□□□□ -1.35
ATXN3-238ENST00000556288 XRN1Q8IZH2 1706 aaKnown RBP6.59□□□□□ -1.36
ATXN3-238ENST00000556288 LAMC1P11047 1609 aa6.58□□□□□ -1.36
ATXN3-238ENST00000556288 ZNF837Q96EG3 531 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-238ENST00000556288 PSMG3-AS1Q96PY0 264 aa6.58□□□□□ -1.36
ATXN3-238ENST00000556288 PRAM1Q96QH2 718 aa6.58□□□□□ -1.36
ATXN3-238ENST00000556288 CRISPLD1Q9H336 500 aa6.58□□□□□ -1.36
ATXN3-238ENST00000556288 NKTRP30414 1462 aaKnown RBP6.58□□□□□ -1.36
ATXN3-238ENST00000556288 LBRQ14739 615 aaKnown RBP6.57□□□□□ -1.36
ATXN3-238ENST00000556288 LRRC69Q6ZNQ3 347 aa6.57□□□□□ -1.36
ATXN3-238ENST00000556288 NLRP8Q86W28 1048 aa6.57□□□□□ -1.36
ATXN3-238ENST00000556288 GPR161Q8N6U8 529 aaKnown RBP6.57□□□□□ -1.36
ATXN3-238ENST00000556288 C7orf43Q8WVR3 580 aa6.57□□□□□ -1.36
ATXN3-238ENST00000556288 DDX17Q92841 729 aaKnown RBP6.57□□□□□ -1.36
ATXN3-238ENST00000556288 YTHDC2Q9H6S0 1430 aaKnown RBP6.57□□□□□ -1.36
ATXN3-238ENST00000556288 ROBO2Q9HCK4 1378 aa6.57□□□□□ -1.36
ATXN3-238ENST00000556288 KNDC1Q76NI1 1749 aa6.56□□□□□ -1.36
ATXN3-238ENST00000556288 GPR25O00155 361 aa6.56□□□□□ -1.36
ATXN3-238ENST00000556288 ADAM23O75077 832 aa6.56□□□□□ -1.36
ATXN3-238ENST00000556288 PTCD1O75127 700 aaKnown RBP6.56□□□□□ -1.36
ATXN3-238ENST00000556288 THBS1P07996 1170 aa6.56□□□□□ -1.36
ATXN3-238ENST00000556288 SSFA2P28290 1259 aa6.56□□□□□ -1.36
ATXN3-238ENST00000556288 IRS1P35568 1242 aa6.56□□□□□ -1.36
ATXN3-238ENST00000556288 NAA30Q147X3 362 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-238ENST00000556288 RTN1Q16799 776 aa6.56□□□□□ -1.36
ATXN3-238ENST00000556288 CAPN12Q6ZSI9 719 aa6.56□□□□□ -1.36
ATXN3-238ENST00000556288 TRERF1Q96PN7 1200 aa6.56□□□□□ -1.36
ATXN3-238ENST00000556288 ORAI2Q96SN7 254 aa6.56□□□□□ -1.36
ATXN3-238ENST00000556288 ZCCHC2Q9C0B9 1178 aaKnown RBP6.56□□□□□ -1.36
ATXN3-238ENST00000556288 ANKIB1Q9P2G1 1089 aa6.56□□□□□ -1.36
ATXN3-238ENST00000556288 GPC6Q9Y625 555 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-238ENST00000556288 PIK3C2GO75747 1445 aa6.56□□□□□ -1.36
ATXN3-238ENST00000556288 KIAA1210Q9ULL0 1709 aa6.56□□□□□ -1.36
ATXN3-238ENST00000556288 LRPPRCP42704 1394 aaKnown RBP6.56□□□□□ -1.36
ATXN3-238ENST00000556288 MYOM2P54296 1465 aa6.55□□□□□ -1.36
ATXN3-238ENST00000556288 SCNN1AP37088 669 aa6.55□□□□□ -1.36
ATXN3-238ENST00000556288 XPCQ01831 940 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-238ENST00000556288 MEX3CQ5U5Q3 659 aaKnown RBP6.55□□□□□ -1.36
ATXN3-238ENST00000556288 FIGNL1Q6PIW4 674 aa6.55□□□□□ -1.36
ATXN3-238ENST00000556288 KRTAP1-3Q8IUG1 177 aa6.55□□□□□ -1.36
ATXN3-238ENST00000556288 COL26A1Q96A83 441 aa6.55□□□□□ -1.36
ATXN3-238ENST00000556288 KLRG1Q96E93 195 aa6.55□□□□□ -1.36
ATXN3-238ENST00000556288 QTRT2Q9H974 415 aaKnown RBP6.55□□□□□ -1.36
ATXN3-238ENST00000556288 ARHGEF28Q8N1W1 1705 aaKnown RBP6.55□□□□□ -1.36
ATXN3-238ENST00000556288 PLEKHH1Q9ULM0 1364 aa6.55□□□□□ -1.36
ATXN3-238ENST00000556288 ATXN7O15265 892 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-238ENST00000556288 HIF1AQ16665 826 aa6.54□□□□□ -1.36
ATXN3-238ENST00000556288 NBPF8Q3BBV2 869 aa6.54□□□□□ -1.36
ATXN3-238ENST00000556288 ZNF385CQ66K41 422 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-238ENST00000556288 B4GALNT3Q6L9W6 998 aa6.54□□□□□ -1.36
ATXN3-238ENST00000556288 PHLDB3Q6NSJ2 640 aa6.54□□□□□ -1.36
ATXN3-238ENST00000556288 ZNF280CQ8ND82 737 aa6.54□□□□□ -1.36
ATXN3-238ENST00000556288 PMFBP1Q8TBY8 1022 aa6.54□□□□□ -1.36
ATXN3-238ENST00000556288 HSH2DQ96JZ2 352 aa6.54□□□□□ -1.36
ATXN3-238ENST00000556288 SUSD3Q96L08 255 aa6.54□□□□□ -1.36
ATXN3-238ENST00000556288 CARD11Q9BXL7 1154 aa6.54□□□□□ -1.36
ATXN3-238ENST00000556288 KLK14Q9P0G3 267 aa6.54□□□□□ -1.36
ATXN3-238ENST00000556288 SEPT3Q9UH03 358 aa6.54□□□□□ -1.36
ATXN3-238ENST00000556288 PCDHGC4Q9Y5F7 938 aa6.54□□□□□ -1.36
ATXN3-238ENST00000556288 ABCC11Q96J66 1382 aa6.54□□□□□ -1.36
ATXN3-238ENST00000556288 DISP3Q9P2K9 1392 aa6.54□□□□□ -1.36
ATXN3-238ENST00000556288 TRPM1Q7Z4N2 1603 aa6.54□□□□□ -1.36
ATXN3-238ENST00000556288 FMN2Q9NZ56 1722 aa6.53□□□□□ -1.36
ATXN3-238ENST00000556288 NCOA3Q9Y6Q9 1424 aa6.53□□□□□ -1.36
ATXN3-238ENST00000556288 QRICH2Q9H0J4 1663 aa6.53□□□□□ -1.36
ATXN3-238ENST00000556288 DGKZQ13574 1117 aa6.53□□□□□ -1.36
ATXN3-238ENST00000556288 UBAP2LQ14157 1087 aaKnown RBP6.53□□□□□ -1.36
ATXN3-238ENST00000556288 C11orf91Q3C1V1 193 aa6.53□□□□□ -1.36
ATXN3-238ENST00000556288 COX20Q5RI15 118 aa6.53□□□□□ -1.36
ATXN3-238ENST00000556288 BRINP3Q76B58 766 aa6.53□□□□□ -1.36
ATXN3-238ENST00000556288 ABHD17AQ96GS6 310 aa6.53□□□□□ -1.36
ATXN3-238ENST00000556288 CNTNAP3BQ96NU0 1288 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms