RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 USP54Q70EL1 1684 aa12.61□□□□□ -0.39
GTF2A1-204ENST00000556268 MON2Q7Z3U7 1717 aa12.6□□□□□ -0.39
GTF2A1-204ENST00000556268 A0A1W2PP64 1363 aa12.6□□□□□ -0.39
GTF2A1-204ENST00000556268 PLPP7Q8NBV4 271 aa12.6□□□□□ -0.39
GTF2A1-204ENST00000556268 RAB6BQ9NRW1 208 aa12.6□□□□□ -0.39
GTF2A1-204ENST00000556268 MYOM1P52179 1685 aa12.59□□□□□ -0.39
GTF2A1-204ENST00000556268 NHSQ6T4R5 1651 aa12.59□□□□□ -0.39
GTF2A1-204ENST00000556268 PPFIA3O75145 1194 aa12.59□□□□□ -0.39
GTF2A1-204ENST00000556268 FBLN1P23142 703 aa12.59□□□□□ -0.39
GTF2A1-204ENST00000556268 RNF144AP50876 292 aaPredicted RBP12.59□□□□□ -0.39
GTF2A1-204ENST00000556268 CLN3Q13286 438 aa12.59□□□□□ -0.39
GTF2A1-204ENST00000556268 ADAMTS19Q8TE59 1207 aa12.59□□□□□ -0.39
GTF2A1-204ENST00000556268 ERBB4Q15303 1308 aa12.59□□□□□ -0.39
GTF2A1-204ENST00000556268 MAP3K19Q56UN5 1328 aa12.59□□□□□ -0.39
GTF2A1-204ENST00000556268 ST20-MTHFSA0A0A6YYL1 179 aa12.58□□□□□ -0.4
GTF2A1-204ENST00000556268 HOXC9P31274 260 aa12.58□□□□□ -0.4
GTF2A1-204ENST00000556268 PAPPAQ13219 1627 aa12.58□□□□□ -0.4
GTF2A1-204ENST00000556268 PNPLA7Q6ZV29 1317 aa12.58□□□□□ -0.4
GTF2A1-204ENST00000556268 GNRH1P01148 92 aa12.57□□□□□ -0.4
GTF2A1-204ENST00000556268 USP4Q13107 963 aa12.57□□□□□ -0.4
GTF2A1-204ENST00000556268 MAP7D1Q3KQU3 841 aa12.57□□□□□ -0.4
GTF2A1-204ENST00000556268 LYSMD3Q7Z3D4 306 aa12.57□□□□□ -0.4
GTF2A1-204ENST00000556268 ZCRB1Q8TBF4 217 aaKnown RBP12.57□□□□□ -0.4
GTF2A1-204ENST00000556268 IRF7Q92985 503 aa12.57□□□□□ -0.4
GTF2A1-204ENST00000556268 LTV1Q96GA3 475 aaPredicted RBP12.57□□□□□ -0.4
GTF2A1-204ENST00000556268 COG3Q96JB2 828 aa12.57□□□□□ -0.4
GTF2A1-204ENST00000556268 NLRP3Q96P20 1036 aa12.57□□□□□ -0.4
GTF2A1-204ENST00000556268 KAT6BQ8WYB5 2073 aa12.57□□□□□ -0.4
GTF2A1-204ENST00000556268 ANKRD36BQ8N2N9 1353 aa12.56□□□□□ -0.4
GTF2A1-204ENST00000556268 FYB1O15117 783 aa12.56□□□□□ -0.4
GTF2A1-204ENST00000556268 GPC1P35052 558 aa12.56□□□□□ -0.4
GTF2A1-204ENST00000556268 TFCP2L1Q9NZI6 479 aa12.56□□□□□ -0.4
GTF2A1-204ENST00000556268 SLC35F4A4IF30 521 aa12.55□□□□□ -0.4
GTF2A1-204ENST00000556268 POLD1P28340 1107 aa12.55□□□□□ -0.4
GTF2A1-204ENST00000556268 AMPHP49418 695 aa12.55□□□□□ -0.4
GTF2A1-204ENST00000556268 KCNQ4P56696 695 aa12.55□□□□□ -0.4
GTF2A1-204ENST00000556268 C1QTNF8P60827 252 aa12.55□□□□□ -0.4
GTF2A1-204ENST00000556268 NBPF6Q5VWK0 638 aa12.55□□□□□ -0.4
GTF2A1-204ENST00000556268 PRICKLE2Q7Z3G6 844 aa12.55□□□□□ -0.4
GTF2A1-204ENST00000556268 CCDC155Q8N6L0 562 aa12.55□□□□□ -0.4
GTF2A1-204ENST00000556268 NBPF4Q96M43 638 aa12.55□□□□□ -0.4
GTF2A1-204ENST00000556268 CGNL1Q0VF96 1302 aa12.55□□□□□ -0.4
GTF2A1-204ENST00000556268 BTAF1O14981 1849 aa12.55□□□□□ -0.4
GTF2A1-204ENST00000556268 NSD2O96028 1365 aa12.55□□□□□ -0.4
GTF2A1-204ENST00000556268 IL2RAP01589 272 aa12.54□□□□□ -0.4
GTF2A1-204ENST00000556268 GPR162Q16538 588 aa12.54□□□□□ -0.4
GTF2A1-204ENST00000556268 LTN1O94822 1766 aa12.53□□□□□ -0.4
GTF2A1-204ENST00000556268 SENP3-EIF4A1A0A087X0R7 540 aa12.53□□□□□ -0.4
GTF2A1-204ENST00000556268 STAU1O95793 577 aaKnown RBP12.53□□□□□ -0.4
GTF2A1-204ENST00000556268 SKIP12755 728 aa12.53□□□□□ -0.4
GTF2A1-204ENST00000556268 SYTL4Q96C24 671 aaPredicted RBP12.53□□□□□ -0.4
GTF2A1-204ENST00000556268 WIPF1O43516 503 aa12.52□□□□□ -0.41
GTF2A1-204ENST00000556268 VSIG8P0DPA2 414 aa12.52□□□□□ -0.41
GTF2A1-204ENST00000556268 RHOQP17081 205 aa12.52□□□□□ -0.41
GTF2A1-204ENST00000556268 GMPRP36959 345 aa12.52□□□□□ -0.41
GTF2A1-204ENST00000556268 COL23A1Q86Y22 540 aaPredicted RBP12.52□□□□□ -0.41
GTF2A1-204ENST00000556268 CNKSR1Q969H4 720 aa12.52□□□□□ -0.41
GTF2A1-204ENST00000556268 ESYT1Q9BSJ8 1104 aa12.52□□□□□ -0.41
GTF2A1-204ENST00000556268 CCNL1Q9UK58 526 aaPredicted RBP12.52□□□□□ -0.41
GTF2A1-204ENST00000556268 COL24A1Q17RW2 1714 aa12.51□□□□□ -0.41
GTF2A1-204ENST00000556268 CHD4Q14839 1912 aa12.51□□□□□ -0.41
GTF2A1-204ENST00000556268 HMGB2P26583 209 aaKnown RBP12.51□□□□□ -0.41
GTF2A1-204ENST00000556268 RRS1Q15050 365 aaKnown RBP12.51□□□□□ -0.41
GTF2A1-204ENST00000556268 HDGFL1Q5TGJ6 251 aa12.51□□□□□ -0.41
GTF2A1-204ENST00000556268 NFATC2IPQ8NCF5 419 aa12.51□□□□□ -0.41
GTF2A1-204ENST00000556268 UCN2Q96RP3 112 aa12.51□□□□□ -0.41
GTF2A1-204ENST00000556268 TONSLQ96HA7 1378 aa12.51□□□□□ -0.41
GTF2A1-204ENST00000556268 GOLGB1Q14789 3259 aaKnown RBP12.5□□□□□ -0.41
GTF2A1-204ENST00000556268 A6NJR5 290 aa12.5□□□□□ -0.41
GTF2A1-204ENST00000556268 NLGN2Q8NFZ4 835 aa12.5□□□□□ -0.41
GTF2A1-204ENST00000556268 GRIP2Q9C0E4 1043 aa12.5□□□□□ -0.41
GTF2A1-204ENST00000556268 ETNK1Q9HBU6 452 aa12.5□□□□□ -0.41
GTF2A1-204ENST00000556268 HRH3Q9Y5N1 445 aa12.5□□□□□ -0.41
GTF2A1-204ENST00000556268 MEGF6O75095 1541 aa12.49□□□□□ -0.41
GTF2A1-204ENST00000556268 GRIN3BO60391 1043 aa12.49□□□□□ -0.41
GTF2A1-204ENST00000556268 HSP90AB2PQ58FF8 381 aa12.49□□□□□ -0.41
GTF2A1-204ENST00000556268 XAGE2Q96GT9 111 aa12.49□□□□□ -0.41
GTF2A1-204ENST00000556268 GGNBP2Q9H3C7 697 aa12.49□□□□□ -0.41
GTF2A1-204ENST00000556268 QSER1Q2KHR3 1735 aa12.48□□□□□ -0.41
GTF2A1-204ENST00000556268 RTL1A6NKG5 1358 aa12.48□□□□□ -0.41
GTF2A1-204ENST00000556268 INSRP06213 1382 aa12.48□□□□□ -0.41
GTF2A1-204ENST00000556268 USP47Q96K76 1375 aa12.48□□□□□ -0.41
GTF2A1-204ENST00000556268 USP17L5A8MUK1 530 aa12.48□□□□□ -0.41
GTF2A1-204ENST00000556268 YBX3P16989 372 aaKnown RBP eCLIP12.48□□□□□ -0.412e-6■□□□□ 8.2
GTF2A1-204ENST00000556268 EML3Q32P44 896 aa12.48□□□□□ -0.41
GTF2A1-204ENST00000556268 RAPGEF4Q8WZA2 1011 aa12.48□□□□□ -0.41
GTF2A1-204ENST00000556268 GLMNQ92990 594 aa12.48□□□□□ -0.41
GTF2A1-204ENST00000556268 CD2APQ9Y5K6 639 aa12.48□□□□□ -0.41
GTF2A1-204ENST00000556268 FAM208AQ9UK61 1670 aaKnown RBP12.48□□□□□ -0.41
GTF2A1-204ENST00000556268 KIF24Q5T7B8 1368 aa12.47□□□□□ -0.41
GTF2A1-204ENST00000556268 CYP27B1O15528 508 aa12.47□□□□□ -0.41
GTF2A1-204ENST00000556268 TATP17735 454 aaPredicted RBP12.47□□□□□ -0.41
GTF2A1-204ENST00000556268 ITGA6P23229 1130 aa12.47□□□□□ -0.41
GTF2A1-204ENST00000556268 SCNN1DP51172 638 aa12.47□□□□□ -0.41
GTF2A1-204ENST00000556268 TMF1P82094 1093 aa12.47□□□□□ -0.41
GTF2A1-204ENST00000556268 CENPCQ03188 943 aa12.47□□□□□ -0.41
GTF2A1-204ENST00000556268 POU4F2Q12837 409 aa12.47□□□□□ -0.41
GTF2A1-204ENST00000556268 NCOA4Q13772 614 aa12.47□□□□□ -0.41
GTF2A1-204ENST00000556268 USHBP1Q8N6Y0 703 aa12.47□□□□□ -0.41
GTF2A1-204ENST00000556268 FLAD1Q8NFF5 587 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms