RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 RSBN1LQ6PCB5 846 aaPredicted RBP12.08□□□□□ -0.48
ACTN1-215ENST00000555616 C15orf52Q6ZUT6 534 aaKnown RBP12.08□□□□□ -0.48
ACTN1-215ENST00000555616 ANKRD44Q8N8A2 993 aa12.08□□□□□ -0.48
ACTN1-215ENST00000555616 ARHGAP45Q92619 1136 aa12.08□□□□□ -0.48
ACTN1-215ENST00000555616 API5Q9BZZ5 524 aaKnown RBP12.08□□□□□ -0.48
ACTN1-215ENST00000555616 COA1Q9GZY4 146 aa12.08□□□□□ -0.48
ACTN1-215ENST00000555616 USP44Q9H0E7 712 aa12.08□□□□□ -0.48
ACTN1-215ENST00000555616 BICC1Q9H694 974 aaKnown RBP12.08□□□□□ -0.48
ACTN1-215ENST00000555616 NOB1Q9ULX3 412 aaKnown RBP12.08□□□□□ -0.48
ACTN1-215ENST00000555616 USP17L3A6NCW0 530 aa12.07□□□□□ -0.48
ACTN1-215ENST00000555616 USP17L4A6NCW7 530 aa12.07□□□□□ -0.48
ACTN1-215ENST00000555616 TMEM88BA6NKF7 163 aa12.07□□□□□ -0.48
ACTN1-215ENST00000555616 H7C1D1 291 aa12.07□□□□□ -0.48
ACTN1-215ENST00000555616 PDE3AQ14432 1141 aa12.07□□□□□ -0.48
ACTN1-215ENST00000555616 ATF7IPQ6VMQ6 1270 aa12.07□□□□□ -0.48
ACTN1-215ENST00000555616 USP17L1Q7RTZ2 530 aa12.07□□□□□ -0.48
ACTN1-215ENST00000555616 TXNRD3Q86VQ6 643 aa12.07□□□□□ -0.48
ACTN1-215ENST00000555616 FTSJ3Q8IY81 847 aaKnown RBP12.07□□□□□ -0.48
ACTN1-215ENST00000555616 AGBL3Q8NEM8 1001 aa12.07□□□□□ -0.48
ACTN1-215ENST00000555616 GMLQ99445 158 aa12.07□□□□□ -0.48
ACTN1-215ENST00000555616 CNTNAP1P78357 1384 aa12.06□□□□□ -0.48
ACTN1-215ENST00000555616 PLIN1O60240 522 aa12.06□□□□□ -0.48
ACTN1-215ENST00000555616 KCNJ4P48050 445 aa12.06□□□□□ -0.48
ACTN1-215ENST00000555616 ZNF280AP59817 542 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-215ENST00000555616 TAF7LQ5H9L4 462 aa12.06□□□□□ -0.48
ACTN1-215ENST00000555616 LDHAL6AQ6ZMR3 332 aa12.06□□□□□ -0.48
ACTN1-215ENST00000555616 ZNF594Q96JF6 807 aaPredicted RBP12.06□□□□□ -0.48
ACTN1-215ENST00000555616 TAF5LO75529 589 aa12.05□□□□□ -0.48
ACTN1-215ENST00000555616 EGFRP00533 1210 aa12.05□□□□□ -0.48
ACTN1-215ENST00000555616 KIF4BQ2VIQ3 1234 aa12.05□□□□□ -0.48
ACTN1-215ENST00000555616 DACT2Q5SW24 774 aa12.05□□□□□ -0.48
ACTN1-215ENST00000555616 STRIP1Q5VSL9 837 aa12.05□□□□□ -0.48
ACTN1-215ENST00000555616 SAMD7Q7Z3H4 446 aa12.05□□□□□ -0.48
ACTN1-215ENST00000555616 DZIP1LQ8IYY4 767 aaKnown RBP12.05□□□□□ -0.48
ACTN1-215ENST00000555616 HELBQ8NG08 1087 aaPredicted RBP12.05□□□□□ -0.48
ACTN1-215ENST00000555616 CNNM1Q9NRU3 951 aa12.05□□□□□ -0.48
ACTN1-215ENST00000555616 MYO3BQ8WXR4 1341 aa12.05□□□□□ -0.48
ACTN1-215ENST00000555616 SNAP23O00161 211 aa12.04□□□□□ -0.48
ACTN1-215ENST00000555616 TRAF5O00463 557 aa12.04□□□□□ -0.48
ACTN1-215ENST00000555616 TRIM27P14373 513 aa12.04□□□□□ -0.48
ACTN1-215ENST00000555616 TBC1D10BQ4KMP7 808 aaPredicted RBP12.04□□□□□ -0.48
ACTN1-215ENST00000555616 GLIS2Q9BZE0 524 aaPredicted RBP12.04□□□□□ -0.48
ACTN1-215ENST00000555616 MROH5Q6ZUA9 1318 aa12.04□□□□□ -0.48
ACTN1-215ENST00000555616 THSD7BQ9C0I4 1608 aa12.04□□□□□ -0.48
ACTN1-215ENST00000555616 RASSF10A6NK89 507 aa12.03□□□□□ -0.48
ACTN1-215ENST00000555616 USP17L8P0C7I0 530 aa12.03□□□□□ -0.48
ACTN1-215ENST00000555616 UBTFL1P0CB47 393 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-215ENST00000555616 FMR1Q06787 632 aaKnown RBP eCLIP12.03□□□□□ -0.487e-6■■■□□ 17.4
ACTN1-215ENST00000555616 INTS3Q68E01 1043 aaKnown RBP12.03□□□□□ -0.48
ACTN1-215ENST00000555616 CDC37L1Q7L3B6 337 aa12.03□□□□□ -0.48
ACTN1-215ENST00000555616 ZNF804AQ7Z570 1209 aa12.03□□□□□ -0.48
ACTN1-215ENST00000555616 PUS3Q9BZE2 481 aaKnown RBP12.03□□□□□ -0.48
ACTN1-215ENST00000555616 CD209Q9NNX6 404 aa12.03□□□□□ -0.48
ACTN1-215ENST00000555616 MKRN1Q9UHC7 482 aaKnown RBP12.03□□□□□ -0.48
ACTN1-215ENST00000555616 RIPOR2Q9Y4F9 1068 aa12.03□□□□□ -0.48
ACTN1-215ENST00000555616 IL1R1P14778 569 aa12.02□□□□□ -0.49
ACTN1-215ENST00000555616 RFX5P48382 616 aaPredicted RBP12.02□□□□□ -0.49
ACTN1-215ENST00000555616 UBE4AQ14139 1066 aa12.02□□□□□ -0.49
ACTN1-215ENST00000555616 CST9Q5W186 159 aa12.02□□□□□ -0.49
ACTN1-215ENST00000555616 CLUAP1Q96AJ1 413 aa12.02□□□□□ -0.49
ACTN1-215ENST00000555616 GGA3Q9NZ52 723 aa12.02□□□□□ -0.49
ACTN1-215ENST00000555616 MMP14P50281 582 aa12.01□□□□□ -0.49
ACTN1-215ENST00000555616 IRX6P78412 446 aaPredicted RBP12.01□□□□□ -0.49
ACTN1-215ENST00000555616 C20orf194Q5TEA3 1177 aa12.01□□□□□ -0.49
ACTN1-215ENST00000555616 KRT26Q7Z3Y9 468 aa12.01□□□□□ -0.49
ACTN1-215ENST00000555616 VGLL2Q8N8G2 317 aa12.01□□□□□ -0.49
ACTN1-215ENST00000555616 PANK1Q8TE04 598 aa12.01□□□□□ -0.49
ACTN1-215ENST00000555616 MEIS3Q99687 375 aa12.01□□□□□ -0.49
ACTN1-215ENST00000555616 MXD3Q9BW11 206 aa12.01□□□□□ -0.49
ACTN1-215ENST00000555616 MYOZ2Q9NPC6 264 aa12.01□□□□□ -0.49
ACTN1-215ENST00000555616 HDAC5Q9UQL6 1122 aa12.01□□□□□ -0.49
ACTN1-215ENST00000555616 TRPM7Q96QT4 1865 aa12□□□□□ -0.49
ACTN1-215ENST00000555616 GTF2IP78347 998 aa12□□□□□ -0.49
ACTN1-215ENST00000555616 LRRC24Q50LG9 513 aa12□□□□□ -0.49
ACTN1-215ENST00000555616 RBM26Q5T8P6 1007 aaKnown RBP12□□□□□ -0.49
ACTN1-215ENST00000555616 ERICH6BQ5W0A0 696 aa12□□□□□ -0.49
ACTN1-215ENST00000555616 TTLL5Q6EMB2 1281 aa12□□□□□ -0.49
ACTN1-215ENST00000555616 FBXW7Q969H0 707 aa12□□□□□ -0.49
ACTN1-215ENST00000555616 DCPSQ96C86 337 aaKnown RBP12□□□□□ -0.49
ACTN1-215ENST00000555616 CHMP4BQ9H444 224 aaKnown RBP12□□□□□ -0.49
ACTN1-215ENST00000555616 ABT1Q9ULW3 272 aaKnown RBP12□□□□□ -0.49
ACTN1-215ENST00000555616 LRRFIP2Q9Y608 721 aaKnown RBP12□□□□□ -0.49
ACTN1-215ENST00000555616 TLL2Q9Y6L7 1015 aa12□□□□□ -0.49
ACTN1-215ENST00000555616 ASTN2O75129 1339 aaPredicted RBP12□□□□□ -0.49
ACTN1-215ENST00000555616 PITPNM2Q9BZ72 1349 aa12□□□□□ -0.49
ACTN1-215ENST00000555616 PCNTO95613 3336 aa12□□□□□ -0.49
ACTN1-215ENST00000555616 ADM5C9JUS6 153 aa11.99□□□□□ -0.49
ACTN1-215ENST00000555616 EYA2O00167 538 aa11.99□□□□□ -0.49
ACTN1-215ENST00000555616 PDE8BO95263 885 aa11.99□□□□□ -0.49
ACTN1-215ENST00000555616 CELF2O95319 508 aaKnown RBP11.99□□□□□ -0.49
ACTN1-215ENST00000555616 RLBP1P12271 317 aa11.99□□□□□ -0.49
ACTN1-215ENST00000555616 VEGFBP49765 207 aa11.99□□□□□ -0.49
ACTN1-215ENST00000555616 FKBP1AP62942 108 aaKnown RBP11.99□□□□□ -0.49
ACTN1-215ENST00000555616 PTPN12Q05209 780 aaKnown RBP11.99□□□□□ -0.49
ACTN1-215ENST00000555616 MVPQ14764 893 aaKnown RBP11.99□□□□□ -0.49
ACTN1-215ENST00000555616 METTL24Q5JXM2 366 aa11.99□□□□□ -0.49
ACTN1-215ENST00000555616 ANGEL2Q5VTE6 544 aaKnown RBP11.99□□□□□ -0.49
ACTN1-215ENST00000555616 USP48Q86UV5 1035 aa11.99□□□□□ -0.49
ACTN1-215ENST00000555616 ITPRIPQ8IWB1 547 aa11.99□□□□□ -0.49
ACTN1-215ENST00000555616 SULF1Q8IWU6 871 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms