RNA–Protein interactions for RNA: ENST00000555451.1

XRCC3-213, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-213ENST00000555451 UBE4AQ14139 1066 aa13.5□□□□□ -0.25
XRCC3-213ENST00000555451 HELBQ8NG08 1087 aaPredicted RBP13.5□□□□□ -0.25
XRCC3-213ENST00000555451 FSD1Q9BTV5 496 aa13.5□□□□□ -0.25
XRCC3-213ENST00000555451 C22orf23Q9BZE7 217 aa13.5□□□□□ -0.25
XRCC3-213ENST00000555451 RAD50Q92878 1312 aa13.49□□□□□ -0.25
XRCC3-213ENST00000555451 A0A0G2JLW4 131 aa13.49□□□□□ -0.25
XRCC3-213ENST00000555451 TAF5LO75529 589 aa13.49□□□□□ -0.25
XRCC3-213ENST00000555451 DPEP1P16444 411 aa13.49□□□□□ -0.25
XRCC3-213ENST00000555451 YBX3P16989 372 aaKnown RBP eCLIP13.49□□□□□ -0.25
XRCC3-213ENST00000555451 ARID4AP29374 1257 aaPredicted RBP13.49□□□□□ -0.25
XRCC3-213ENST00000555451 PDE6BP35913 854 aa13.49□□□□□ -0.25
XRCC3-213ENST00000555451 RBM25P49756 843 aaKnown RBP13.49□□□□□ -0.25
XRCC3-213ENST00000555451 GPR162Q16538 588 aa13.49□□□□□ -0.25
XRCC3-213ENST00000555451 TMC4Q7Z404 712 aa13.49□□□□□ -0.25
XRCC3-213ENST00000555451 CRAMP1Q96RY5 1269 aa13.49□□□□□ -0.25
XRCC3-213ENST00000555451 DNAJC2Q99543 621 aaKnown RBP13.49□□□□□ -0.25
XRCC3-213ENST00000555451 PAG1Q9NWQ8 432 aa13.49□□□□□ -0.25
XRCC3-213ENST00000555451 LRRC37AA6NMS7 1700 aa13.48□□□□□ -0.25
XRCC3-213ENST00000555451 LRRFIP1Q32MZ4 808 aaKnown RBP13.48□□□□□ -0.25
XRCC3-213ENST00000555451 CCDC102BQ68D86 513 aa13.48□□□□□ -0.25
XRCC3-213ENST00000555451 KBTBD3Q8NAB2 608 aa13.48□□□□□ -0.25
XRCC3-213ENST00000555451 ZNF784Q8NCA9 323 aaPredicted RBP13.48□□□□□ -0.25
XRCC3-213ENST00000555451 DDRGK1Q96HY6 314 aa13.48□□□□□ -0.25
XRCC3-213ENST00000555451 AKAP11Q9UKA4 1901 aa13.48□□□□□ -0.25
XRCC3-213ENST00000555451 SGSM2O43147 1006 aa13.47□□□□□ -0.25
XRCC3-213ENST00000555451 GRIN3BO60391 1043 aa13.47□□□□□ -0.25
XRCC3-213ENST00000555451 BBOX1O75936 387 aa13.47□□□□□ -0.25
XRCC3-213ENST00000555451 COL11A2P13942 1736 aaPredicted RBP13.47□□□□□ -0.25
XRCC3-213ENST00000555451 GOLIM4O00461 696 aa13.46□□□□□ -0.25
XRCC3-213ENST00000555451 NPR1P16066 1061 aa13.46□□□□□ -0.25
XRCC3-213ENST00000555451 CHRNA5P30532 468 aa13.46□□□□□ -0.25
XRCC3-213ENST00000555451 PHKA1P46020 1223 aa13.46□□□□□ -0.25
XRCC3-213ENST00000555451 KCNJ4P48050 445 aa13.46□□□□□ -0.25
XRCC3-213ENST00000555451 TTF1Q15361 905 aaPredicted RBP13.46□□□□□ -0.25
XRCC3-213ENST00000555451 CWC27Q6UX04 472 aaKnown RBP13.46□□□□□ -0.25
XRCC3-213ENST00000555451 USP26Q9BXU7 913 aa13.46□□□□□ -0.25
XRCC3-213ENST00000555451 PIM2Q9P1W9 311 aa13.46□□□□□ -0.25
XRCC3-213ENST00000555451 LEMD3Q9Y2U8 911 aa13.46□□□□□ -0.25
XRCC3-213ENST00000555451 GOLGB1Q14789 3259 aaKnown RBP13.46□□□□□ -0.25
XRCC3-213ENST00000555451 XDHP47989 1333 aa13.45□□□□□ -0.26
XRCC3-213ENST00000555451 ZBTB22O15209 634 aa13.45□□□□□ -0.26
XRCC3-213ENST00000555451 SRGNP10124 158 aa13.45□□□□□ -0.26
XRCC3-213ENST00000555451 ALDH1B1P30837 517 aa13.45□□□□□ -0.26
XRCC3-213ENST00000555451 MCAMP43121 646 aa13.45□□□□□ -0.26
XRCC3-213ENST00000555451 FKBP4Q02790 459 aaKnown RBP eCLIP13.45□□□□□ -0.26
XRCC3-213ENST00000555451 CAVIN4Q5BKX8 364 aa13.45□□□□□ -0.26
XRCC3-213ENST00000555451 EDC3Q96F86 508 aaKnown RBP13.45□□□□□ -0.26
XRCC3-213ENST00000555451 SNRKQ9NRH2 765 aa13.45□□□□□ -0.26
XRCC3-213ENST00000555451 GNL3LQ9NVN8 582 aaKnown RBP13.45□□□□□ -0.26
XRCC3-213ENST00000555451 MYH7P12883 1935 aa13.45□□□□□ -0.26
XRCC3-213ENST00000555451 BRCA1P38398 1863 aaKnown RBP13.44□□□□□ -0.26
XRCC3-213ENST00000555451 ZNF804BA4D1E1 1349 aa13.44□□□□□ -0.26
XRCC3-213ENST00000555451 H0YIN7 160 aa13.44□□□□□ -0.26
XRCC3-213ENST00000555451 ZFYP08048 801 aaPredicted RBP13.44□□□□□ -0.26
XRCC3-213ENST00000555451 MCCP23508 829 aa13.44□□□□□ -0.26
XRCC3-213ENST00000555451 ZAP70P43403 619 aa13.44□□□□□ -0.26
XRCC3-213ENST00000555451 NMIQ13287 307 aaPredicted RBP13.44□□□□□ -0.26
XRCC3-213ENST00000555451 SCARF1Q14162 830 aa13.44□□□□□ -0.26
XRCC3-213ENST00000555451 KIAA1211Q6ZU35 1233 aa13.44□□□□□ -0.26
XRCC3-213ENST00000555451 C2CD5Q86YS7 1000 aa13.44□□□□□ -0.26
XRCC3-213ENST00000555451 MASTLQ96GX5 879 aa13.44□□□□□ -0.26
XRCC3-213ENST00000555451 ANO2Q9NQ90 1003 aa13.44□□□□□ -0.26
XRCC3-213ENST00000555451 NDUFB9Q9Y6M9 179 aa13.44□□□□□ -0.26
XRCC3-213ENST00000555451 MED23Q9ULK4 1368 aa13.44□□□□□ -0.26
XRCC3-213ENST00000555451 CEP350Q5VT06 3117 aa13.44□□□□□ -0.26
XRCC3-213ENST00000555451 DOCK2Q92608 1830 aa13.43□□□□□ -0.26
XRCC3-213ENST00000555451 SNAP23O00161 211 aa13.43□□□□□ -0.26
XRCC3-213ENST00000555451 PPEF1O14829 653 aaPredicted RBP13.43□□□□□ -0.26
XRCC3-213ENST00000555451 SEMA3EO15041 775 aa13.43□□□□□ -0.26
XRCC3-213ENST00000555451 DALRD3Q5D0E6 543 aaKnown RBP13.43□□□□□ -0.26
XRCC3-213ENST00000555451 ZSCAN25Q6NSZ9 544 aa13.43□□□□□ -0.26
XRCC3-213ENST00000555451 IPO9Q96P70 1041 aaKnown RBP13.43□□□□□ -0.26
XRCC3-213ENST00000555451 HMG20BQ9P0W2 317 aa13.43□□□□□ -0.26
XRCC3-213ENST00000555451 ANKIB1Q9P2G1 1089 aa13.43□□□□□ -0.26
XRCC3-213ENST00000555451 BCS1LQ9Y276 419 aa13.43□□□□□ -0.26
XRCC3-213ENST00000555451 MYH13Q9UKX3 1938 aa13.43□□□□□ -0.26
XRCC3-213ENST00000555451 LTBP1Q14766 1721 aa13.42□□□□□ -0.26
XRCC3-213ENST00000555451 ATP2B4P23634 1241 aa13.42□□□□□ -0.26
XRCC3-213ENST00000555451 BCAMP50895 628 aa13.42□□□□□ -0.26
XRCC3-213ENST00000555451 RASGRF1Q13972 1273 aa13.42□□□□□ -0.26
XRCC3-213ENST00000555451 STYK1Q6J9G0 422 aa13.42□□□□□ -0.26
XRCC3-213ENST00000555451 C15orf52Q6ZUT6 534 aaKnown RBP13.42□□□□□ -0.26
XRCC3-213ENST00000555451 VPS37DQ86XT2 251 aa13.42□□□□□ -0.26
XRCC3-213ENST00000555451 SP8Q8IXZ3 490 aa13.42□□□□□ -0.26
XRCC3-213ENST00000555451 SPATA5Q8NB90 893 aa13.42□□□□□ -0.26
XRCC3-213ENST00000555451 FAM227BQ96M60 508 aa13.42□□□□□ -0.26
XRCC3-213ENST00000555451 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.42□□□□□ -0.26
XRCC3-213ENST00000555451 IL25Q9H293 177 aa13.42□□□□□ -0.26
XRCC3-213ENST00000555451 ANTXR1Q9H6X2 564 aa13.42□□□□□ -0.26
XRCC3-213ENST00000555451 HELLSQ9NRZ9 838 aa13.42□□□□□ -0.26
XRCC3-213ENST00000555451 PODXL2Q9NZ53 605 aa13.42□□□□□ -0.26
XRCC3-213ENST00000555451 WWC3Q9ULE0 1092 aa13.42□□□□□ -0.26
XRCC3-213ENST00000555451 DLEC1Q9Y238 1755 aa13.42□□□□□ -0.26
XRCC3-213ENST00000555451 PDS5AQ29RF7 1337 aaKnown RBP13.41□□□□□ -0.26
XRCC3-213ENST00000555451 CHD4Q14839 1912 aa13.41□□□□□ -0.26
XRCC3-213ENST00000555451 A0A0D9SFI3 127 aa13.41□□□□□ -0.26
XRCC3-213ENST00000555451 RNF113AO15541 343 aaKnown RBP13.41□□□□□ -0.26
XRCC3-213ENST00000555451 CYP2E1P05181 493 aaPredicted RBP13.41□□□□□ -0.26
XRCC3-213ENST00000555451 ZMYM1Q5SVZ6 1142 aa13.41□□□□□ -0.26
XRCC3-213ENST00000555451 FBXO33Q7Z6M2 555 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms