RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 USO1O60763 962 aaKnown RBP9.64□□□□□ -0.87
LINC00641-201ENST00000555379 HOXA7P31268 230 aaPredicted RBP9.64□□□□□ -0.87
LINC00641-201ENST00000555379 GBP2P32456 591 aaPredicted RBP9.64□□□□□ -0.87
LINC00641-201ENST00000555379 SNX16P57768 344 aa9.64□□□□□ -0.87
LINC00641-201ENST00000555379 PUM3Q15397 648 aaKnown RBP9.64□□□□□ -0.87
LINC00641-201ENST00000555379 DCAF15Q66K64 600 aa9.64□□□□□ -0.87
LINC00641-201ENST00000555379 CCDC174Q6PII3 467 aa9.64□□□□□ -0.87
LINC00641-201ENST00000555379 PICK1Q9NRD5 415 aa9.64□□□□□ -0.87
LINC00641-201ENST00000555379 KIF1BO60333 1816 aa9.64□□□□□ -0.87
LINC00641-201ENST00000555379 FIBPO43427 364 aa9.64□□□□□ -0.87
LINC00641-201ENST00000555379 RRP36Q96EU6 259 aaKnown RBP9.64□□□□□ -0.87
LINC00641-201ENST00000555379 CTAGE1Q96RT6 745 aa9.64□□□□□ -0.87
LINC00641-201ENST00000555379 SLC52A2Q9HAB3 445 aa9.64□□□□□ -0.87
LINC00641-201ENST00000555379 NCAPD2Q15021 1401 aa9.64□□□□□ -0.87
LINC00641-201ENST00000555379 RNF123Q5XPI4 1314 aa9.63□□□□□ -0.87
LINC00641-201ENST00000555379 SEMA3EO15041 775 aa9.63□□□□□ -0.87
LINC00641-201ENST00000555379 KCNG4Q8TDN1 519 aa9.63□□□□□ -0.87
LINC00641-201ENST00000555379 METTL22Q9BUU2 404 aaPredicted RBP9.63□□□□□ -0.87
LINC00641-201ENST00000555379 TAOK3Q9H2K8 898 aa9.63□□□□□ -0.87
LINC00641-201ENST00000555379 CLEC11AQ9Y240 323 aa9.63□□□□□ -0.87
LINC00641-201ENST00000555379 TTC37Q6PGP7 1564 aa9.63□□□□□ -0.87
LINC00641-201ENST00000555379 MAP3K19Q56UN5 1328 aa9.63□□□□□ -0.87
LINC00641-201ENST00000555379 UBA7P41226 1012 aa9.63□□□□□ -0.87
LINC00641-201ENST00000555379 GSDMDP57764 484 aa9.63□□□□□ -0.87
LINC00641-201ENST00000555379 TUBB4BP68371 445 aa9.63□□□□□ -0.87
LINC00641-201ENST00000555379 TCIRG1Q13488 830 aa9.63□□□□□ -0.87
LINC00641-201ENST00000555379 NUTM1Q86Y26 1132 aa9.63□□□□□ -0.87
LINC00641-201ENST00000555379 SEPT7Q16181 437 aaKnown RBP9.63□□□□□ -0.87
LINC00641-201ENST00000555379 IFIT1BQ5T764 474 aaKnown RBP9.63□□□□□ -0.87
LINC00641-201ENST00000555379 TTC22Q5TAA0 569 aa9.63□□□□□ -0.87
LINC00641-201ENST00000555379 PRPF40BQ6NWY9 871 aaKnown RBP9.63□□□□□ -0.87
LINC00641-201ENST00000555379 NFATC2IPQ8NCF5 419 aa9.63□□□□□ -0.87
LINC00641-201ENST00000555379 BACH2Q9BYV9 841 aa9.63□□□□□ -0.87
LINC00641-201ENST00000555379 GNPATO15228 680 aa9.63□□□□□ -0.87
LINC00641-201ENST00000555379 RNF113AO15541 343 aaKnown RBP9.63□□□□□ -0.87
LINC00641-201ENST00000555379 TRIM27P14373 513 aa9.63□□□□□ -0.87
LINC00641-201ENST00000555379 ZSCAN30Q86W11 494 aa9.63□□□□□ -0.87
LINC00641-201ENST00000555379 NIM1KQ8IY84 436 aa9.63□□□□□ -0.87
LINC00641-201ENST00000555379 CARD10Q9BWT7 1032 aa9.63□□□□□ -0.87
LINC00641-201ENST00000555379 POTEB2H3BUK9 544 aa9.62□□□□□ -0.87
LINC00641-201ENST00000555379 ZBTB43O43298 467 aa9.62□□□□□ -0.87
LINC00641-201ENST00000555379 OTUD7BQ6GQQ9 843 aa9.62□□□□□ -0.87
LINC00641-201ENST00000555379 DPY19L2Q6NUT2 758 aa9.62□□□□□ -0.87
LINC00641-201ENST00000555379 MRPL50Q8N5N7 158 aaKnown RBP9.62□□□□□ -0.87
LINC00641-201ENST00000555379 PIBF1Q8WXW3 757 aa9.62□□□□□ -0.87
LINC00641-201ENST00000555379 TRAK2O60296 914 aa9.62□□□□□ -0.87
LINC00641-201ENST00000555379 ATP2B4P23634 1241 aa9.62□□□□□ -0.87
LINC00641-201ENST00000555379 GIGYF2Q6Y7W6 1299 aaKnown RBP9.62□□□□□ -0.87
LINC00641-201ENST00000555379 CHPF2Q9P2E5 772 aa9.62□□□□□ -0.87
LINC00641-201ENST00000555379 SWAP70Q9UH65 585 aa9.62□□□□□ -0.87
LINC00641-201ENST00000555379 WDR78Q5VTH9 848 aa9.62□□□□□ -0.87
LINC00641-201ENST00000555379 TMEM87BQ96K49 555 aa9.62□□□□□ -0.87
LINC00641-201ENST00000555379 STX6O43752 255 aa9.62□□□□□ -0.87
LINC00641-201ENST00000555379 RTN1Q16799 776 aa9.62□□□□□ -0.87
LINC00641-201ENST00000555379 CCDC183Q5T5S1 534 aa9.62□□□□□ -0.87
LINC00641-201ENST00000555379 ZNF790Q6PG37 636 aa9.62□□□□□ -0.87
LINC00641-201ENST00000555379 SMARCC2Q8TAQ2 1214 aa9.62□□□□□ -0.87
LINC00641-201ENST00000555379 MYCBPQ99417 103 aaPredicted RBP9.62□□□□□ -0.87
LINC00641-201ENST00000555379 SPDYE3A6NKU9 549 aa9.61□□□□□ -0.87
LINC00641-201ENST00000555379 EYA1Q99502 592 aa9.61□□□□□ -0.87
LINC00641-201ENST00000555379 IMPG2Q9BZV3 1241 aa9.61□□□□□ -0.87
LINC00641-201ENST00000555379 HAUS2Q9NVX0 235 aa9.61□□□□□ -0.87
LINC00641-201ENST00000555379 FOSBP53539 338 aa9.61□□□□□ -0.87
LINC00641-201ENST00000555379 MAP9Q49MG5 647 aa9.61□□□□□ -0.87
LINC00641-201ENST00000555379 FILIP1Q7Z7B0 1213 aa9.61□□□□□ -0.87
LINC00641-201ENST00000555379 SLC4A4Q9Y6R1 1079 aa9.61□□□□□ -0.87
LINC00641-201ENST00000555379 YEATS4O95619 227 aa9.61□□□□□ -0.87
LINC00641-201ENST00000555379 USP48Q86UV5 1035 aa9.61□□□□□ -0.87
LINC00641-201ENST00000555379 KRT13P13646 458 aa9.61□□□□□ -0.87
LINC00641-201ENST00000555379 KIF22Q14807 665 aa9.61□□□□□ -0.87
LINC00641-201ENST00000555379 LMBR1LQ6UX01 489 aa9.61□□□□□ -0.87
LINC00641-201ENST00000555379 BRAPQ7Z569 592 aa9.61□□□□□ -0.87
LINC00641-201ENST00000555379 HACE1Q8IYU2 909 aa9.61□□□□□ -0.87
LINC00641-201ENST00000555379 USP16Q9Y5T5 823 aa9.61□□□□□ -0.87
LINC00641-201ENST00000555379 PTPRTO14522 1441 aa9.61□□□□□ -0.87
LINC00641-201ENST00000555379 ATP10DQ9P241 1426 aa9.61□□□□□ -0.87
LINC00641-201ENST00000555379 MTHFSDQ2M296 383 aaKnown RBP9.61□□□□□ -0.87
LINC00641-201ENST00000555379 NAA15Q9BXJ9 866 aaKnown RBP9.61□□□□□ -0.87
LINC00641-201ENST00000555379 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.61□□□□□ -0.87
LINC00641-201ENST00000555379 PAG1Q9NWQ8 432 aa9.61□□□□□ -0.87
LINC00641-201ENST00000555379 MBD5Q9P267 1494 aa9.61□□□□□ -0.87
LINC00641-201ENST00000555379 IBTKQ9P2D0 1353 aaPredicted RBP9.6□□□□□ -0.87
LINC00641-201ENST00000555379 CACNA2D4Q7Z3S7 1137 aa9.6□□□□□ -0.87
LINC00641-201ENST00000555379 CDAN1Q8IWY9 1227 aa9.6□□□□□ -0.87
LINC00641-201ENST00000555379 CCDC82Q8N4S0 544 aa9.6□□□□□ -0.87
LINC00641-201ENST00000555379 H7C1D1 291 aa9.6□□□□□ -0.87
LINC00641-201ENST00000555379 EYA2O00167 538 aa9.6□□□□□ -0.87
LINC00641-201ENST00000555379 CCDC94Q9BW85 323 aaPredicted RBP9.6□□□□□ -0.87
LINC00641-201ENST00000555379 GRPEL1Q9HAV7 217 aa9.6□□□□□ -0.87
LINC00641-201ENST00000555379 HIBADHP31937 336 aaKnown RBP9.6□□□□□ -0.87
LINC00641-201ENST00000555379 ABCD1P33897 745 aa9.6□□□□□ -0.87
LINC00641-201ENST00000555379 UVSSAQ2YD98 709 aa9.6□□□□□ -0.87
LINC00641-201ENST00000555379 TBC1D5Q92609 795 aa9.6□□□□□ -0.87
LINC00641-201ENST00000555379 NUCB1Q02818 461 aa9.6□□□□□ -0.87
LINC00641-201ENST00000555379 STK3Q13188 491 aa9.6□□□□□ -0.87
LINC00641-201ENST00000555379 LPIN2Q92539 896 aa9.6□□□□□ -0.87
LINC00641-201ENST00000555379 CCDC8Q9H0W5 538 aaPredicted RBP9.6□□□□□ -0.87
LINC00641-201ENST00000555379 CDC42BPGQ6DT37 1551 aa9.59□□□□□ -0.87
LINC00641-201ENST00000555379 LAMC1P11047 1609 aa9.59□□□□□ -0.87
LINC00641-201ENST00000555379 BICDL2A1A5D9 508 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms