RNA–Protein interactions for RNA: ENST00000554980.5

TGFB3-202, Transcript of transforming growth factor beta 3, humanhuman

TSL 2

Gene TGFB3, Length 2,708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-202ENST00000554980 JAZF1Q86VZ6 243 aa8.78□□□□□ -1
TGFB3-202ENST00000554980 PHC3Q8NDX5 983 aa8.78□□□□□ -1
TGFB3-202ENST00000554980 ANKRD24Q8TF21 1146 aa8.78□□□□□ -1
TGFB3-202ENST00000554980 COG3Q96JB2 828 aa8.78□□□□□ -1
TGFB3-202ENST00000554980 FMNL2Q96PY5 1086 aa8.78□□□□□ -1
TGFB3-202ENST00000554980 MPHOSPH6Q99547 160 aaKnown RBP8.78□□□□□ -1
TGFB3-202ENST00000554980 TANGO6Q9C0B7 1094 aa8.78□□□□□ -1
TGFB3-202ENST00000554980 ZNF232Q9UNY5 417 aa8.78□□□□□ -1
TGFB3-202ENST00000554980 THRAP3Q9Y2W1 955 aaKnown RBP8.78□□□□□ -1
TGFB3-202ENST00000554980 TNS1Q9HBL0 1735 aaKnown RBP8.77□□□□□ -1
TGFB3-202ENST00000554980 PPFIA3O75145 1194 aa8.77□□□□□ -1.01
TGFB3-202ENST00000554980 GSE1Q14687 1217 aa8.77□□□□□ -1.01
TGFB3-202ENST00000554980 SAMD3Q8N6K7 520 aa8.77□□□□□ -1.01
TGFB3-202ENST00000554980 JMYQ8N9B5 988 aa8.77□□□□□ -1.01
TGFB3-202ENST00000554980 ERCC4Q92889 916 aaPredicted RBP8.77□□□□□ -1.01
TGFB3-202ENST00000554980 RMI1Q9H9A7 625 aa8.77□□□□□ -1.01
TGFB3-202ENST00000554980 NLRP2Q9NX02 1062 aa8.77□□□□□ -1.01
TGFB3-202ENST00000554980 UTP6Q9NYH9 597 aaKnown RBP8.77□□□□□ -1.01
TGFB3-202ENST00000554980 NINLQ9Y2I6 1382 aa8.77□□□□□ -1.01
TGFB3-202ENST00000554980 IL16Q14005 1332 aa8.77□□□□□ -1.01
TGFB3-202ENST00000554980 PARP4Q9UKK3 1724 aaKnown RBP8.77□□□□□ -1.01
TGFB3-202ENST00000554980 PSDA5PKW4 1024 aaPredicted RBP8.77□□□□□ -1.01
TGFB3-202ENST00000554980 COL6A1P12109 1028 aa8.77□□□□□ -1.01
TGFB3-202ENST00000554980 EIF4G2P78344 907 aaKnown RBP eCLIP8.77□□□□□ -1.01
TGFB3-202ENST00000554980 SIM2Q14190 667 aaPredicted RBP8.77□□□□□ -1.01
TGFB3-202ENST00000554980 MYO1HQ8N1T3 1032 aa8.77□□□□□ -1.01
TGFB3-202ENST00000554980 TMC2Q8TDI7 906 aa8.77□□□□□ -1.01
TGFB3-202ENST00000554980 RUNDC1Q96C34 613 aa8.77□□□□□ -1.01
TGFB3-202ENST00000554980 DDX56Q9NY93 547 aaKnown RBP8.77□□□□□ -1.01
TGFB3-202ENST00000554980 DMGDHQ9UI17 866 aaKnown RBP8.77□□□□□ -1.01
TGFB3-202ENST00000554980 TMCC3Q9ULS5 477 aa8.77□□□□□ -1.01
TGFB3-202ENST00000554980 GNEQ9Y223 722 aaKnown RBP8.77□□□□□ -1.01
TGFB3-202ENST00000554980 DISP2A7MBM2 1401 aa8.77□□□□□ -1.01
TGFB3-202ENST00000554980 NSD3Q9BZ95 1437 aa8.77□□□□□ -1.01
TGFB3-202ENST00000554980 RGPD2P0DJD1 1756 aa8.77□□□□□ -1.01
TGFB3-202ENST00000554980 HOXC9P31274 260 aa8.76□□□□□ -1.01
TGFB3-202ENST00000554980 ENOX2Q16206 610 aaKnown RBP8.76□□□□□ -1.01
TGFB3-202ENST00000554980 DDB1Q16531 1140 aa8.76□□□□□ -1.01
TGFB3-202ENST00000554980 CCDC93Q567U6 631 aa8.76□□□□□ -1.01
TGFB3-202ENST00000554980 FAM196AQ6ZSG2 479 aa8.76□□□□□ -1.01
TGFB3-202ENST00000554980 HTATSF1O43719 755 aaKnown RBP8.76□□□□□ -1.01
TGFB3-202ENST00000554980 TPPPO94811 219 aa8.76□□□□□ -1.01
TGFB3-202ENST00000554980 APBA3O96018 575 aa8.76□□□□□ -1.01
TGFB3-202ENST00000554980 CCDC175P0C221 793 aa8.76□□□□□ -1.01
TGFB3-202ENST00000554980 VAMP1P23763 118 aa8.76□□□□□ -1.01
TGFB3-202ENST00000554980 ERCC5P28715 1186 aaPredicted RBP8.76□□□□□ -1.01
TGFB3-202ENST00000554980 IP6K1Q92551 441 aa8.76□□□□□ -1.01
TGFB3-202ENST00000554980 LZTS2Q9BRK4 669 aa8.76□□□□□ -1.01
TGFB3-202ENST00000554980 ACAD8Q9UKU7 415 aa8.76□□□□□ -1.01
TGFB3-202ENST00000554980 PAXBP1Q9Y5B6 917 aa8.76□□□□□ -1.01
TGFB3-202ENST00000554980 PEAK1Q9H792 1746 aa8.76□□□□□ -1.01
TGFB3-202ENST00000554980 KCNQ2O43526 872 aa8.75□□□□□ -1.01
TGFB3-202ENST00000554980 PTK7Q13308 1070 aa8.75□□□□□ -1.01
TGFB3-202ENST00000554980 SOGA3Q5TF21 947 aa8.75□□□□□ -1.01
TGFB3-202ENST00000554980 NDUFAF2Q8N183 169 aa8.75□□□□□ -1.01
TGFB3-202ENST00000554980 USHBP1Q8N6Y0 703 aa8.75□□□□□ -1.01
TGFB3-202ENST00000554980 CAMKK2Q96RR4 588 aa8.75□□□□□ -1.01
TGFB3-202ENST00000554980 CD248Q9HCU0 757 aa8.75□□□□□ -1.01
TGFB3-202ENST00000554980 IP6K2Q9UHH9 426 aa8.75□□□□□ -1.01
TGFB3-202ENST00000554980 WNK3Q9BYP7 1800 aa8.75□□□□□ -1.01
TGFB3-202ENST00000554980 GOLGA6L22H0YM25 854 aa8.75□□□□□ -1.01
TGFB3-202ENST00000554980 SMCR8Q8TEV9 937 aaPredicted RBP8.75□□□□□ -1.01
TGFB3-202ENST00000554980 GOLGA1Q92805 767 aa8.75□□□□□ -1.01
TGFB3-202ENST00000554980 MED4Q9NPJ6 270 aa8.75□□□□□ -1.01
TGFB3-202ENST00000554980 EMILIN1Q9Y6C2 1016 aa8.75□□□□□ -1.01
TGFB3-202ENST00000554980 RBP3P10745 1247 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 FAM160A1Q05DH4 1040 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 CLASRPQ8N2M8 674 aaKnown RBP8.74□□□□□ -1.01
TGFB3-202ENST00000554980 MNS1Q8NEH6 495 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 IFT57Q9NWB7 429 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 TTF2Q9UNY4 1162 aaKnown RBP8.74□□□□□ -1.01
TGFB3-202ENST00000554980 PABPN1LA6NDY0 278 aaKnown RBP8.74□□□□□ -1.01
TGFB3-202ENST00000554980 BAG6P46379 1132 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 AMPHP49418 695 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 MSL1Q68DK7 614 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 OTUD6AQ7L8S5 288 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 ELOA2Q8IYF1 753 aaPredicted RBP8.74□□□□□ -1.01
TGFB3-202ENST00000554980 PANK3Q9H999 370 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 AVENQ9NQS1 362 aaPredicted RBP8.74□□□□□ -1.01
TGFB3-202ENST00000554980 LZTS1Q9Y250 596 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 GJA3Q9Y6H8 435 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 SBF2Q86WG5 1849 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 RGPD1P0DJD0 1748 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 GOLGA6L6A8MZA4 724 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 TAGLNQ01995 201 aaKnown RBP8.74□□□□□ -1.01
TGFB3-202ENST00000554980 FAM161AQ3B820 660 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 LRCH2Q5VUJ6 765 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 CDC37L1Q7L3B6 337 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 RELL1Q8IUW5 271 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 STAG2Q8N3U4 1231 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 FRS2Q8WU20 508 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 VRTNQ9H8Y1 702 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 AS3MTQ9HBK9 375 aa8.74□□□□□ -1.01
TGFB3-202ENST00000554980 KIF20BQ96Q89 1820 aa8.73□□□□□ -1.01
TGFB3-202ENST00000554980 ANKRD33BA6NCL7 494 aa8.73□□□□□ -1.01
TGFB3-202ENST00000554980 RNASEH2AO75792 299 aaKnown RBP8.73□□□□□ -1.01
TGFB3-202ENST00000554980 LCA5Q86VQ0 697 aa8.73□□□□□ -1.01
TGFB3-202ENST00000554980 FRAT1Q92837 279 aaPredicted RBP8.73□□□□□ -1.01
TGFB3-202ENST00000554980 ACSBG1Q96GR2 724 aa8.73□□□□□ -1.01
TGFB3-202ENST00000554980 PDGFDQ9GZP0 370 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms