RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 POLA1P09884 1462 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-227ENST00000554491 PBRM1Q86U86 1689 aa6.9□□□□□ -1.3
ATXN3-227ENST00000554491 LINC01387J3KSC0 135 aa6.9□□□□□ -1.3
ATXN3-227ENST00000554491 FSTP19883 344 aa6.9□□□□□ -1.3
ATXN3-227ENST00000554491 ZAP70P43403 619 aa6.9□□□□□ -1.3
ATXN3-227ENST00000554491 TMEM164Q5U3C3 297 aa6.9□□□□□ -1.3
ATXN3-227ENST00000554491 TXNDC11Q6PKC3 985 aa6.9□□□□□ -1.3
ATXN3-227ENST00000554491 Q6ZS46 218 aa6.9□□□□□ -1.3
ATXN3-227ENST00000554491 GPR152Q8TDT2 470 aa6.9□□□□□ -1.3
ATXN3-227ENST00000554491 LACRTQ9GZZ8 138 aa6.9□□□□□ -1.3
ATXN3-227ENST00000554491 PPME1Q9Y570 386 aa6.9□□□□□ -1.3
ATXN3-227ENST00000554491 WISP1O95388 367 aa6.89□□□□□ -1.31
ATXN3-227ENST00000554491 GLB1P16278 677 aa6.89□□□□□ -1.31
ATXN3-227ENST00000554491 CDC25BP30305 580 aa6.89□□□□□ -1.31
ATXN3-227ENST00000554491 MAP4K3Q8IVH8 894 aa6.89□□□□□ -1.31
ATXN3-227ENST00000554491 UBL7Q96S82 380 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-227ENST00000554491 SRA1Q9HD15 236 aaKnown RBP6.89□□□□□ -1.31
ATXN3-227ENST00000554491 SLAIN2Q9P270 581 aa6.89□□□□□ -1.31
ATXN3-227ENST00000554491 DIP2BQ9P265 1576 aa6.88□□□□□ -1.31
ATXN3-227ENST00000554491 SYNJ2O15056 1496 aa6.88□□□□□ -1.31
ATXN3-227ENST00000554491 CYP2E1P05181 493 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-227ENST00000554491 HYAL2Q12891 473 aa6.88□□□□□ -1.31
ATXN3-227ENST00000554491 CEP135Q66GS9 1140 aa6.88□□□□□ -1.31
ATXN3-227ENST00000554491 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.88□□□□□ -1.31
ATXN3-227ENST00000554491 CARD10Q9BWT7 1032 aa6.88□□□□□ -1.31
ATXN3-227ENST00000554491 RASSF4Q9H2L5 321 aa6.88□□□□□ -1.31
ATXN3-227ENST00000554491 KCNK4Q9NYG8 393 aa6.88□□□□□ -1.31
ATXN3-227ENST00000554491 TM4SF5O14894 197 aa6.87□□□□□ -1.31
ATXN3-227ENST00000554491 ATG7O95352 703 aa6.87□□□□□ -1.31
ATXN3-227ENST00000554491 SCNN1AP37088 669 aa6.87□□□□□ -1.31
ATXN3-227ENST00000554491 TTC39BQ5VTQ0 682 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-227ENST00000554491 MUC3BQ9H195 1237 aa6.87□□□□□ -1.31
ATXN3-227ENST00000554491 STIM2Q9P246 746 aa6.87□□□□□ -1.31
ATXN3-227ENST00000554491 SSTR4P31391 388 aa6.86□□□□□ -1.31
ATXN3-227ENST00000554491 SPACA7Q96KW9 195 aa6.86□□□□□ -1.31
ATXN3-227ENST00000554491 SH2B1Q9NRF2 756 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-227ENST00000554491 ABI2Q9NYB9 513 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-227ENST00000554491 FAM13BQ9NYF5 915 aa6.86□□□□□ -1.31
ATXN3-227ENST00000554491 SEPT3Q9UH03 358 aa6.86□□□□□ -1.31
ATXN3-227ENST00000554491 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-227ENST00000554491 ADGRL1O94910 1474 aa6.85□□□□□ -1.31
ATXN3-227ENST00000554491 RAD54L2Q9Y4B4 1467 aa6.85□□□□□ -1.31
ATXN3-227ENST00000554491 PTCD1O75127 700 aaKnown RBP6.85□□□□□ -1.31
ATXN3-227ENST00000554491 SMNDC1O75940 238 aaKnown RBP eCLIP6.85□□□□□ -1.31
ATXN3-227ENST00000554491 KIF4AO95239 1232 aa6.85□□□□□ -1.31
ATXN3-227ENST00000554491 CDC27P30260 824 aa6.85□□□□□ -1.31
ATXN3-227ENST00000554491 CD68P34810 354 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-227ENST00000554491 ACAD11Q709F0 780 aa6.85□□□□□ -1.31
ATXN3-227ENST00000554491 ATCAYQ86WG3 371 aa6.85□□□□□ -1.31
ATXN3-227ENST00000554491 CACTIN-AS1Q8N1I8 211 aa6.85□□□□□ -1.31
ATXN3-227ENST00000554491 CLP1Q92989 425 aaKnown RBP6.85□□□□□ -1.31
ATXN3-227ENST00000554491 PCMTD2Q9NV79 361 aa6.85□□□□□ -1.31
ATXN3-227ENST00000554491 FNDC3AQ9Y2H6 1198 aaKnown RBP6.85□□□□□ -1.31
ATXN3-227ENST00000554491 SHROOM2Q13796 1616 aa6.85□□□□□ -1.31
ATXN3-227ENST00000554491 CEP170Q5SW79 1584 aa6.85□□□□□ -1.31
ATXN3-227ENST00000554491 TSPOAP1O95153 1857 aa6.85□□□□□ -1.31
ATXN3-227ENST00000554491 DDX3YO15523 660 aaKnown RBP6.84□□□□□ -1.31
ATXN3-227ENST00000554491 EPHA1P21709 976 aa6.84□□□□□ -1.31
ATXN3-227ENST00000554491 KIAA1211Q6ZU35 1233 aa6.84□□□□□ -1.31
ATXN3-227ENST00000554491 ARMC10Q8N2F6 343 aa6.84□□□□□ -1.31
ATXN3-227ENST00000554491 CEP120Q8N960 986 aa6.84□□□□□ -1.31
ATXN3-227ENST00000554491 DCAF11Q8TEB1 546 aa6.84□□□□□ -1.31
ATXN3-227ENST00000554491 POP1Q99575 1024 aaKnown RBP6.84□□□□□ -1.31
ATXN3-227ENST00000554491 KRTAP4-12Q9BQ66 201 aa6.84□□□□□ -1.31
ATXN3-227ENST00000554491 PBX4Q9BYU1 374 aa6.84□□□□□ -1.31
ATXN3-227ENST00000554491 TMEM63CQ9P1W3 806 aa6.84□□□□□ -1.31
ATXN3-227ENST00000554491 KANSL3Q9P2N6 904 aa6.84□□□□□ -1.31
ATXN3-227ENST00000554491 RAXQ9Y2V3 346 aa6.84□□□□□ -1.31
ATXN3-227ENST00000554491 GRIN2BQ13224 1484 aa6.84□□□□□ -1.31
ATXN3-227ENST00000554491 LMTK3Q96Q04 1460 aa6.84□□□□□ -1.31
ATXN3-227ENST00000554491 MAPKBP1O60336 1514 aa6.83□□□□□ -1.32
ATXN3-227ENST00000554491 FSCN2O14926 492 aa6.83□□□□□ -1.32
ATXN3-227ENST00000554491 ADAM11O75078 769 aa6.83□□□□□ -1.32
ATXN3-227ENST00000554491 MED26O95402 600 aa6.83□□□□□ -1.32
ATXN3-227ENST00000554491 NCAPG2Q86XI2 1143 aa6.83□□□□□ -1.32
ATXN3-227ENST00000554491 KRTAP1-3Q8IUG1 177 aa6.83□□□□□ -1.32
ATXN3-227ENST00000554491 NUDT16Q96DE0 195 aaKnown RBP6.83□□□□□ -1.32
ATXN3-227ENST00000554491 ELP3Q9H9T3 547 aa6.83□□□□□ -1.32
ATXN3-227ENST00000554491 CNTN3Q9P232 1028 aa6.83□□□□□ -1.32
ATXN3-227ENST00000554491 ABCC10Q5T3U5 1492 aa6.83□□□□□ -1.32
ATXN3-227ENST00000554491 TDRD9Q8NDG6 1382 aaKnown RBP6.82□□□□□ -1.32
ATXN3-227ENST00000554491 ACPPP15309 386 aa6.82□□□□□ -1.32
ATXN3-227ENST00000554491 CD97P48960 835 aa6.82□□□□□ -1.32
ATXN3-227ENST00000554491 SLC51AQ86UW1 340 aa6.82□□□□□ -1.32
ATXN3-227ENST00000554491 UBASH3BQ8TF42 649 aa6.82□□□□□ -1.32
ATXN3-227ENST00000554491 FBXO41Q8TF61 875 aa6.82□□□□□ -1.32
ATXN3-227ENST00000554491 FOXD4L4Q8WXT5 416 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-227ENST00000554491 STOML1Q9UBI4 398 aa6.82□□□□□ -1.32
ATXN3-227ENST00000554491 TGFB1P01137 390 aa6.81□□□□□ -1.32
ATXN3-227ENST00000554491 IGLV1-40P01703 118 aa6.81□□□□□ -1.32
ATXN3-227ENST00000554491 ATP2B4P23634 1241 aa6.81□□□□□ -1.32
ATXN3-227ENST00000554491 DUOXA2Q1HG44 320 aa6.81□□□□□ -1.32
ATXN3-227ENST00000554491 ABTB2Q8N961 1025 aa6.81□□□□□ -1.32
ATXN3-227ENST00000554491 KLHDC7BQ96G42 594 aa6.81□□□□□ -1.32
ATXN3-227ENST00000554491 FGD5Q6ZNL6 1462 aa6.8□□□□□ -1.32
ATXN3-227ENST00000554491 DHX15O43143 795 aaKnown RBP6.8□□□□□ -1.32
ATXN3-227ENST00000554491 PTPRAP18433 802 aa6.8□□□□□ -1.32
ATXN3-227ENST00000554491 PDE12Q6L8Q7 609 aaKnown RBP6.8□□□□□ -1.32
ATXN3-227ENST00000554491 ZNF438Q7Z4V0 828 aa6.8□□□□□ -1.32
ATXN3-227ENST00000554491 TRIM42Q8IWZ5 723 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms