RNA–Protein interactions for RNA: ENST00000554108.6

CFAP54-205, Transcript of cilia and flagella associated protein 54, human

TSL 5

Gene CFAP54, Length 2,323 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CFAP54-205	ENST00000554108	MAP4K1	Q92918	833 aa		10.18	□□□□□ -0.78
CFAP54-205	ENST00000554108	PLSCR1	O15162	318 aa		10.17	□□□□□ -0.78
CFAP54-205	ENST00000554108	ARID4A	P29374	1257 aa	Predicted RBP	10.17	□□□□□ -0.78
CFAP54-205	ENST00000554108	NECTIN1	Q15223	517 aa		10.17	□□□□□ -0.78
CFAP54-205	ENST00000554108	MCMDC2	Q4G0Z9	681 aa		10.17	□□□□□ -0.78
CFAP54-205	ENST00000554108	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.17	□□□□□ -0.78
CFAP54-205	ENST00000554108	BSDC1	Q9NW68	430 aa	Predicted RBP	10.17	□□□□□ -0.78
CFAP54-205	ENST00000554108	HSP90AA1	P07900	732 aa	Known RBP	10.17	□□□□□ -0.78
CFAP54-205	ENST00000554108	KCNJ4	P48050	445 aa		10.17	□□□□□ -0.78
CFAP54-205	ENST00000554108	MAST3	O60307	1309 aa		10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	MYH13	Q9UKX3	1938 aa		10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	WTIP	A6NIX2	430 aa	Predicted RBP	10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	RNF113A	O15541	343 aa	Known RBP	10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	CYP2E1	P05181	493 aa	Predicted RBP	10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	ADCK5	Q3MIX3	580 aa		10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	ZMYM1	Q5SVZ6	1142 aa		10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	CREB3L3	Q68CJ9	461 aa		10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	PRR5L	Q6MZQ0	368 aa		10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	NOL8	Q76FK4	1167 aa	Known RBP	10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	TFCP2L1	Q9NZI6	479 aa		10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108		M0R2C6	588 aa		10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	SLC27A2	O14975	620 aa		10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	UQCRFS1P1	P0C7P4	283 aa		10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	TM4SF1	P30408	202 aa		10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	DDIT3	P35638	169 aa		10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	KCNB2	Q92953	911 aa		10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	AKT1S1	Q96B36	256 aa		10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	PIH1D3	Q9NQM4	214 aa	Known RBP	10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	HELLS	Q9NRZ9	838 aa		10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	MINPP1	Q9UNW1	487 aa		10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	TAF6L	Q9Y6J9	622 aa		10.16	□□□□□ -0.78
CFAP54-205	ENST00000554108	LAMA4	Q16363	1823 aa		10.15	□□□□□ -0.78
CFAP54-205	ENST00000554108	CPA1	P15085	419 aa		10.15	□□□□□ -0.78
CFAP54-205	ENST00000554108	BCAM	P50895	628 aa		10.15	□□□□□ -0.78
CFAP54-205	ENST00000554108	DDR1	Q08345	913 aa		10.15	□□□□□ -0.78
CFAP54-205	ENST00000554108	RASGRF1	Q13972	1273 aa		10.15	□□□□□ -0.78
CFAP54-205	ENST00000554108	VPS53	Q5VIR6	699 aa		10.15	□□□□□ -0.78
CFAP54-205	ENST00000554108	HMG20B	Q9P0W2	317 aa		10.15	□□□□□ -0.78
CFAP54-205	ENST00000554108	ANKRD31	Q8N7Z5	1873 aa		10.15	□□□□□ -0.78
CFAP54-205	ENST00000554108	SERPINB2	P05120	415 aa		10.15	□□□□□ -0.79
CFAP54-205	ENST00000554108	CAST	P20810	708 aa	Known RBP	10.15	□□□□□ -0.79
CFAP54-205	ENST00000554108	RPS8	P62241	208 aa	Known RBP	10.15	□□□□□ -0.79
CFAP54-205	ENST00000554108	SLC51A	Q86UW1	340 aa		10.15	□□□□□ -0.79
CFAP54-205	ENST00000554108	TICAM2	Q86XR7	235 aa		10.15	□□□□□ -0.79
CFAP54-205	ENST00000554108	FBXO41	Q8TF61	875 aa		10.15	□□□□□ -0.79
CFAP54-205	ENST00000554108	OSBP2	Q969R2	916 aa		10.15	□□□□□ -0.79
CFAP54-205	ENST00000554108	JAKMIP1	Q96N16	626 aa	Known RBP	10.15	□□□□□ -0.79
CFAP54-205	ENST00000554108	ZKSCAN1	P17029	563 aa	Predicted RBP	10.14	□□□□□ -0.79
CFAP54-205	ENST00000554108	NFKBIB	Q15653	356 aa		10.14	□□□□□ -0.79
CFAP54-205	ENST00000554108	WASHC4	Q2M389	1173 aa		10.14	□□□□□ -0.79
CFAP54-205	ENST00000554108	COL23A1	Q86Y22	540 aa	Predicted RBP	10.14	□□□□□ -0.79
CFAP54-205	ENST00000554108	SPATA5	Q8NB90	893 aa		10.14	□□□□□ -0.79
CFAP54-205	ENST00000554108	CHMP5	Q9NZZ3	219 aa		10.14	□□□□□ -0.79
CFAP54-205	ENST00000554108	RPAP1	Q9BWH6	1393 aa	Predicted RBP	10.14	□□□□□ -0.79
CFAP54-205	ENST00000554108	NRXN2	Q9P2S2	1712 aa		10.14	□□□□□ -0.79
CFAP54-205	ENST00000554108	COL1A1	P02452	1464 aa	Predicted RBP	10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108	POLRMT	O00411	1230 aa	Known RBP	10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108	IDH1	O75874	414 aa	Known RBP	10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108	ZFY	P08048	801 aa	Predicted RBP	10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108	GYG1	P46976	350 aa		10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108	ST5	P78524	1137 aa		10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108	COL9A3	Q14050	684 aa	Predicted RBP	10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108	TTF1	Q15361	905 aa	Predicted RBP	10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108	TMX3	Q96JJ7	454 aa		10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108	TTC14	Q96N46	770 aa		10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108	KLRK1	P26718	216 aa		10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108	MCM2	P49736	904 aa		10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108	UBE4A	Q14139	1066 aa		10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108	RNF20	Q5VTR2	975 aa		10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108	APPBP2	Q92624	585 aa		10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108	PUS7L	Q9H0K6	701 aa	Known RBP	10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108	WWC3	Q9ULE0	1092 aa		10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108		U3KPZ7	1027 aa	Predicted RBP	10.13	□□□□□ -0.79
CFAP54-205	ENST00000554108	HSPD1	P10809	573 aa	Known RBP	10.12	□□□□□ -0.79
CFAP54-205	ENST00000554108	HMGB2	P26583	209 aa	Known RBP	10.12	□□□□□ -0.79
CFAP54-205	ENST00000554108	ADD2	P35612	726 aa		10.12	□□□□□ -0.79
CFAP54-205	ENST00000554108	AK2	P54819	239 aa		10.12	□□□□□ -0.79
CFAP54-205	ENST00000554108	SLC9C2	Q5TAH2	1124 aa		10.12	□□□□□ -0.79
CFAP54-205	ENST00000554108	ZGPAT	Q8N5A5	531 aa	Known RBP	10.12	□□□□□ -0.79
CFAP54-205	ENST00000554108	DSCC1	Q9BVC3	393 aa		10.12	□□□□□ -0.79
CFAP54-205	ENST00000554108	ZSWIM6	Q9HCJ5	1215 aa		10.12	□□□□□ -0.79
CFAP54-205	ENST00000554108	ZNF804B	A4D1E1	1349 aa		10.12	□□□□□ -0.79
CFAP54-205	ENST00000554108	FRAT2	O75474	233 aa	Predicted RBP	10.12	□□□□□ -0.79
CFAP54-205	ENST00000554108	CYP21A2	P08686	494 aa		10.12	□□□□□ -0.79
CFAP54-205	ENST00000554108	GRAP	Q13588	217 aa		10.12	□□□□□ -0.79
CFAP54-205	ENST00000554108	GRAPL	Q8TC17	118 aa	Predicted RBP	10.12	□□□□□ -0.79
CFAP54-205	ENST00000554108	LARP6	Q9BRS8	491 aa	Known RBP	10.12	□□□□□ -0.79
CFAP54-205	ENST00000554108	TM6SF1	Q9BZW5	370 aa		10.12	□□□□□ -0.79
CFAP54-205	ENST00000554108	PNPLA7	Q6ZV29	1317 aa		10.12	□□□□□ -0.79
CFAP54-205	ENST00000554108	COL11A2	P13942	1736 aa	Predicted RBP	10.11	□□□□□ -0.79
CFAP54-205	ENST00000554108		A0A0G2JLW4	131 aa		10.11	□□□□□ -0.79
CFAP54-205	ENST00000554108	FOXP2	O15409	715 aa		10.11	□□□□□ -0.79
CFAP54-205	ENST00000554108	PDE6A	P16499	860 aa		10.11	□□□□□ -0.79
CFAP54-205	ENST00000554108	CRY2	Q49AN0	593 aa		10.11	□□□□□ -0.79
CFAP54-205	ENST00000554108	RUFY3	Q7L099	469 aa		10.11	□□□□□ -0.79
CFAP54-205	ENST00000554108	RPGR	Q92834	1020 aa	Known RBP	10.11	□□□□□ -0.79
CFAP54-205	ENST00000554108	CYP46A1	Q9Y6A2	500 aa		10.11	□□□□□ -0.79

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