RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 USP42Q9H9J4 1324 aaKnown RBP9.56□□□□□ -0.88
ATXN3-224ENST00000554040 C4AP0C0L4 1744 aa9.56□□□□□ -0.88
ATXN3-224ENST00000554040 ITGB4P16144 1822 aa9.56□□□□□ -0.88
ATXN3-224ENST00000554040 ARFGEF1Q9Y6D6 1849 aa9.56□□□□□ -0.88
ATXN3-224ENST00000554040 TNRC6CQ9HCJ0 1690 aaKnown RBP9.56□□□□□ -0.88
ATXN3-224ENST00000554040 GRM5P41594 1212 aa9.56□□□□□ -0.88
ATXN3-224ENST00000554040 RGS19P49795 217 aa9.56□□□□□ -0.88
ATXN3-224ENST00000554040 LBX1P52954 281 aa9.56□□□□□ -0.88
ATXN3-224ENST00000554040 TTLL6Q8N841 843 aa9.56□□□□□ -0.88
ATXN3-224ENST00000554040 TSC1Q92574 1164 aa9.56□□□□□ -0.88
ATXN3-224ENST00000554040 TESK2Q96S53 571 aa9.56□□□□□ -0.88
ATXN3-224ENST00000554040 C1QTNF2Q9BXJ5 285 aa9.56□□□□□ -0.88
ATXN3-224ENST00000554040 EMILIN1Q9Y6C2 1016 aa9.56□□□□□ -0.88
ATXN3-224ENST00000554040 NCAPD2Q15021 1401 aa9.56□□□□□ -0.88
ATXN3-224ENST00000554040 BRCA1P38398 1863 aaKnown RBP9.55□□□□□ -0.88
ATXN3-224ENST00000554040 NFKBIEO00221 500 aa9.55□□□□□ -0.88
ATXN3-224ENST00000554040 CRKLP46109 303 aaKnown RBP9.55□□□□□ -0.88
ATXN3-224ENST00000554040 VEGFBP49765 207 aa9.55□□□□□ -0.88
ATXN3-224ENST00000554040 WDR4P57081 412 aaKnown RBP9.55□□□□□ -0.88
ATXN3-224ENST00000554040 MLLT1Q03111 559 aaPredicted RBP9.55□□□□□ -0.88
ATXN3-224ENST00000554040 POLR3EQ9NVU0 708 aa9.55□□□□□ -0.88
ATXN3-224ENST00000554040 SBF1O95248 1867 aa9.55□□□□□ -0.88
ATXN3-224ENST00000554040 PKD1L3Q7Z443 1732 aa9.54□□□□□ -0.88
ATXN3-224ENST00000554040 ST20-MTHFSA0A0A6YYL1 179 aa9.54□□□□□ -0.88
ATXN3-224ENST00000554040 HSP90AB1P08238 724 aaKnown RBP9.54□□□□□ -0.88
ATXN3-224ENST00000554040 MRPL14Q6P1L8 145 aaKnown RBP9.54□□□□□ -0.88
ATXN3-224ENST00000554040 WASHC2AQ641Q2 1341 aa9.54□□□□□ -0.88
ATXN3-224ENST00000554040 PASKQ96RG2 1323 aa9.54□□□□□ -0.88
ATXN3-224ENST00000554040 TMEM88BA6NKF7 163 aa9.53□□□□□ -0.88
ATXN3-224ENST00000554040 PPM1GO15355 546 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-224ENST00000554040 PTCD1O75127 700 aaKnown RBP9.53□□□□□ -0.88
ATXN3-224ENST00000554040 HSPA8P11142 646 aaKnown RBP9.53□□□□□ -0.88
ATXN3-224ENST00000554040 ERFEQ4G0M1 354 aa9.53□□□□□ -0.88
ATXN3-224ENST00000554040 USPL1Q5W0Q7 1092 aa9.53□□□□□ -0.88
ATXN3-224ENST00000554040 INTS5Q6P9B9 1019 aaKnown RBP9.53□□□□□ -0.88
ATXN3-224ENST00000554040 SH3BP5LQ7L8J4 393 aa9.53□□□□□ -0.88
ATXN3-224ENST00000554040 BPHLQ86WA6 291 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-224ENST00000554040 ZFAND3Q9H8U3 227 aa9.53□□□□□ -0.88
ATXN3-224ENST00000554040 NXF1Q9UBU9 619 aaKnown RBP9.53□□□□□ -0.88
ATXN3-224ENST00000554040 CABP4P57796 275 aa9.52□□□□□ -0.89
ATXN3-224ENST00000554040 ARID5BQ14865 1188 aa9.52□□□□□ -0.89
ATXN3-224ENST00000554040 NFIXQ14938 502 aa9.52□□□□□ -0.89
ATXN3-224ENST00000554040 C2CD5Q86YS7 1000 aa9.52□□□□□ -0.89
ATXN3-224ENST00000554040 ITPKCQ96DU7 683 aa9.52□□□□□ -0.89
ATXN3-224ENST00000554040 CCDC85CA6NKD9 419 aa9.51□□□□□ -0.89
ATXN3-224ENST00000554040 H0YIN7 160 aa9.51□□□□□ -0.89
ATXN3-224ENST00000554040 DDNO94850 711 aaPredicted RBP9.51□□□□□ -0.89
ATXN3-224ENST00000554040 SERPINB2P05120 415 aa9.51□□□□□ -0.89
ATXN3-224ENST00000554040 MAP2K1Q02750 393 aaPredicted RBP9.51□□□□□ -0.89
ATXN3-224ENST00000554040 CTDSPL2Q05D32 466 aa9.51□□□□□ -0.89
ATXN3-224ENST00000554040 LDHDQ86WU2 507 aa9.51□□□□□ -0.89
ATXN3-224ENST00000554040 HELBQ8NG08 1087 aaPredicted RBP9.51□□□□□ -0.89
ATXN3-224ENST00000554040 PURBQ96QR8 312 aaKnown RBP9.51□□□□□ -0.89
ATXN3-224ENST00000554040 RSPH6AQ9H0K4 717 aa9.51□□□□□ -0.89
ATXN3-224ENST00000554040 ZIC2O95409 532 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-224ENST00000554040 NR5A1Q13285 461 aa9.5□□□□□ -0.89
ATXN3-224ENST00000554040 AGERQ15109 404 aa9.5□□□□□ -0.89
ATXN3-224ENST00000554040 DEFB115Q30KQ5 88 aa9.5□□□□□ -0.89
ATXN3-224ENST00000554040 PLEKHO1Q53GL0 409 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-224ENST00000554040 MYH14Q7Z406 1995 aaKnown RBP9.5□□□□□ -0.89
ATXN3-224ENST00000554040 IQCA1LA6NCM1 817 aa9.49□□□□□ -0.89
ATXN3-224ENST00000554040 RASSF10A6NK89 507 aa9.49□□□□□ -0.89
ATXN3-224ENST00000554040 H3BM21 787 aa9.49□□□□□ -0.89
ATXN3-224ENST00000554040 C21orf2O43822 256 aa9.49□□□□□ -0.89
ATXN3-224ENST00000554040 MTHFSP49914 203 aa9.49□□□□□ -0.89
ATXN3-224ENST00000554040 TRMT44Q8IYL2 757 aaKnown RBP9.49□□□□□ -0.89
ATXN3-224ENST00000554040 NFATC2IPQ8NCF5 419 aa9.49□□□□□ -0.89
ATXN3-224ENST00000554040 ARMC2Q8NEN0 867 aa9.49□□□□□ -0.89
ATXN3-224ENST00000554040 ZNF622Q969S3 477 aaKnown RBP eCLIP9.49□□□□□ -0.89
ATXN3-224ENST00000554040 CARD14Q9BXL6 1004 aa9.49□□□□□ -0.89
ATXN3-224ENST00000554040 TAF1DQ9H5J8 278 aaPredicted RBP9.49□□□□□ -0.89
ATXN3-224ENST00000554040 POLKQ9UBT6 870 aa9.49□□□□□ -0.89
ATXN3-224ENST00000554040 NARFQ9UHQ1 456 aa9.49□□□□□ -0.89
ATXN3-224ENST00000554040 SOBPA7XYQ1 873 aa9.48□□□□□ -0.89
ATXN3-224ENST00000554040 LORP23490 312 aaPredicted RBP9.48□□□□□ -0.89
ATXN3-224ENST00000554040 EIF4A2Q14240 407 aaKnown RBP9.48□□□□□ -0.89
ATXN3-224ENST00000554040 AMOTQ4VCS5 1084 aa9.48□□□□□ -0.89
ATXN3-224ENST00000554040 NPAS3Q8IXF0 933 aa9.48□□□□□ -0.89
ATXN3-224ENST00000554040 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.48□□□□□ -0.89
ATXN3-224ENST00000554040 FAM117AQ9C073 453 aa9.48□□□□□ -0.89
ATXN3-224ENST00000554040 KDM4CQ9H3R0 1056 aa9.48□□□□□ -0.89
ATXN3-224ENST00000554040 MAP4K5Q9Y4K4 846 aa9.48□□□□□ -0.89
ATXN3-224ENST00000554040 SOS1Q07889 1333 aaPredicted RBP9.48□□□□□ -0.89
ATXN3-224ENST00000554040 ERBB4Q15303 1308 aa9.48□□□□□ -0.89
ATXN3-224ENST00000554040 WDR33Q9C0J8 1336 aaKnown RBP9.48□□□□□ -0.89
ATXN3-224ENST00000554040 LTBP3Q9NS15 1303 aa9.48□□□□□ -0.89
ATXN3-224ENST00000554040 PDE4DIPQ5VU43 2346 aa9.48□□□□□ -0.89
ATXN3-224ENST00000554040 SKIV2LQ15477 1246 aaKnown RBP9.47□□□□□ -0.89
ATXN3-224ENST00000554040 SH3D19Q5HYK7 790 aa9.47□□□□□ -0.89
ATXN3-224ENST00000554040 ZNF530Q6P9A1 599 aaPredicted RBP9.47□□□□□ -0.89
ATXN3-224ENST00000554040 DNAJC10Q8IXB1 793 aa9.47□□□□□ -0.89
ATXN3-224ENST00000554040 PROCA1Q8NCQ7 364 aaPredicted RBP9.47□□□□□ -0.89
ATXN3-224ENST00000554040 LRRN4Q8WUT4 740 aa9.47□□□□□ -0.89
ATXN3-224ENST00000554040 TAOK3Q9H2K8 898 aa9.47□□□□□ -0.89
ATXN3-224ENST00000554040 ZNF831Q5JPB2 1677 aa9.47□□□□□ -0.89
ATXN3-224ENST00000554040 CYP19A1P11511 503 aaPredicted RBP9.46□□□□□ -0.9
ATXN3-224ENST00000554040 GMPRP36959 345 aa9.46□□□□□ -0.9
ATXN3-224ENST00000554040 INSM1Q01101 510 aaPredicted RBP9.46□□□□□ -0.9
ATXN3-224ENST00000554040 BRIP1Q9BX63 1249 aa9.46□□□□□ -0.9
ATXN3-224ENST00000554040 STK17AQ9UEE5 414 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms