RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 CEP120Q8N960 986 aa5.61□□□□□ -1.51
SRP54-204ENST00000553923 KLHL23Q8NBE8 558 aa5.61□□□□□ -1.51
SRP54-204ENST00000553923 UBASH3BQ8TF42 649 aa5.61□□□□□ -1.51
SRP54-204ENST00000553923 KLHDC7BQ96G42 594 aa5.61□□□□□ -1.51
SRP54-204ENST00000553923 KRTAP4-7Q9BYR0 210 aa5.61□□□□□ -1.51
SRP54-204ENST00000553923 ADGRE2Q9UHX3 823 aa5.61□□□□□ -1.51
SRP54-204ENST00000553923 ACIN1Q9UKV3 1341 aaKnown RBP5.6□□□□□ -1.51
SRP54-204ENST00000553923 SMNDC1O75940 238 aaKnown RBP eCLIP5.6□□□□□ -1.51
SRP54-204ENST00000553923 CYP2E1P05181 493 aaPredicted RBP5.6□□□□□ -1.51
SRP54-204ENST00000553923 GRIK1P39086 918 aa5.6□□□□□ -1.51
SRP54-204ENST00000553923 DUOXA2Q1HG44 320 aa5.6□□□□□ -1.51
SRP54-204ENST00000553923 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.6□□□□□ -1.51
SRP54-204ENST00000553923 SHKBP1Q8TBC3 707 aa5.6□□□□□ -1.51
SRP54-204ENST00000553923 PIK3R5Q8WYR1 880 aa5.6□□□□□ -1.51
SRP54-204ENST00000553923 POP1Q99575 1024 aaKnown RBP5.6□□□□□ -1.51
SRP54-204ENST00000553923 PBX4Q9BYU1 374 aa5.6□□□□□ -1.51
SRP54-204ENST00000553923 SH2B1Q9NRF2 756 aaPredicted RBP5.6□□□□□ -1.51
SRP54-204ENST00000553923 NOVA2Q9UNW9 492 aaKnown RBP5.6□□□□□ -1.51
SRP54-204ENST00000553923 PRMT3O60678 531 aa5.59□□□□□ -1.51
SRP54-204ENST00000553923 WNT11O96014 354 aa5.59□□□□□ -1.51
SRP54-204ENST00000553923 CDC25BP30305 580 aa5.59□□□□□ -1.51
SRP54-204ENST00000553923 CDCA8Q53HL2 280 aa5.59□□□□□ -1.51
SRP54-204ENST00000553923 ZMIZ1Q9ULJ6 1067 aa5.59□□□□□ -1.51
SRP54-204ENST00000553923 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.59□□□□□ -1.51
SRP54-204ENST00000553923 NFKBIEO00221 500 aa5.58□□□□□ -1.52
SRP54-204ENST00000553923 ZBTB39O15060 712 aa5.58□□□□□ -1.52
SRP54-204ENST00000553923 BMP3P12645 472 aa5.58□□□□□ -1.52
SRP54-204ENST00000553923 HOXA10P31260 410 aaPredicted RBP5.58□□□□□ -1.52
SRP54-204ENST00000553923 PREPP48147 710 aa5.58□□□□□ -1.52
SRP54-204ENST00000553923 ELOAQ14241 798 aaKnown RBP5.58□□□□□ -1.52
SRP54-204ENST00000553923 TTC39BQ5VTQ0 682 aaPredicted RBP5.58□□□□□ -1.52
SRP54-204ENST00000553923 SPACA7Q96KW9 195 aa5.58□□□□□ -1.52
SRP54-204ENST00000553923 ZMYND15Q9H091 742 aa5.58□□□□□ -1.52
SRP54-204ENST00000553923 SEC31BQ9NQW1 1179 aa5.58□□□□□ -1.52
SRP54-204ENST00000553923 SCNN1AP37088 669 aa5.57□□□□□ -1.52
SRP54-204ENST00000553923 ZAP70P43403 619 aa5.57□□□□□ -1.52
SRP54-204ENST00000553923 FZD5Q13467 585 aa5.57□□□□□ -1.52
SRP54-204ENST00000553923 BEND4Q6ZU67 534 aa5.57□□□□□ -1.52
SRP54-204ENST00000553923 WNT8BQ93098 351 aa5.57□□□□□ -1.52
SRP54-204ENST00000553923 ABI2Q9NYB9 513 aaPredicted RBP5.57□□□□□ -1.52
SRP54-204ENST00000553923 FAM13BQ9NYF5 915 aa5.57□□□□□ -1.52
SRP54-204ENST00000553923 SALL4Q9UJQ4 1053 aa5.57□□□□□ -1.52
SRP54-204ENST00000553923 FNDC3AQ9Y2H6 1198 aaKnown RBP5.57□□□□□ -1.52
SRP54-204ENST00000553923 ARID1BQ8NFD5 2236 aaPredicted RBP5.56□□□□□ -1.52
SRP54-204ENST00000553923 H3BRJ5 948 aa5.56□□□□□ -1.52
SRP54-204ENST00000553923 PTPRAP18433 802 aa5.56□□□□□ -1.52
SRP54-204ENST00000553923 RFX1P22670 979 aa5.56□□□□□ -1.52
SRP54-204ENST00000553923 SRPK2P78362 688 aaKnown RBP5.56□□□□□ -1.52
SRP54-204ENST00000553923 ANKRD34AQ69YU3 496 aa5.56□□□□□ -1.52
SRP54-204ENST00000553923 FAM117BQ6P1L5 589 aa5.56□□□□□ -1.52
SRP54-204ENST00000553923 NFXL1Q6ZNB6 911 aa5.56□□□□□ -1.52
SRP54-204ENST00000553923 GPR152Q8TDT2 470 aa5.56□□□□□ -1.52
SRP54-204ENST00000553923 OSGEPQ9NPF4 335 aa5.56□□□□□ -1.52
SRP54-204ENST00000553923 CXXC1Q9P0U4 656 aaPredicted RBP5.56□□□□□ -1.52
SRP54-204ENST00000553923 TMEM63CQ9P1W3 806 aa5.56□□□□□ -1.52
SRP54-204ENST00000553923 CNTN3Q9P232 1028 aa5.56□□□□□ -1.52
SRP54-204ENST00000553923 HIF3AQ9Y2N7 669 aa5.56□□□□□ -1.52
SRP54-204ENST00000553923 MEGF11A6BM72 1044 aa5.55□□□□□ -1.52
SRP54-204ENST00000553923 PIP4K2BP78356 416 aa5.55□□□□□ -1.52
SRP54-204ENST00000553923 NAA30Q147X3 362 aaPredicted RBP5.55□□□□□ -1.52
SRP54-204ENST00000553923 STK32AQ8WU08 396 aa5.55□□□□□ -1.52
SRP54-204ENST00000553923 RNF208Q9H0X6 261 aa5.55□□□□□ -1.52
SRP54-204ENST00000553923 STIM2Q9P246 746 aa5.55□□□□□ -1.52
SRP54-204ENST00000553923 WDR64B1ANS9 1081 aa5.54□□□□□ -1.52
SRP54-204ENST00000553923 ACPPP15309 386 aa5.54□□□□□ -1.52
SRP54-204ENST00000553923 MSMPQ1L6U9 139 aa5.54□□□□□ -1.52
SRP54-204ENST00000553923 HGSNATQ68CP4 663 aa5.54□□□□□ -1.52
SRP54-204ENST00000553923 CBLL1Q75N03 491 aa5.54□□□□□ -1.52
SRP54-204ENST00000553923 NCAPG2Q86XI2 1143 aa5.54□□□□□ -1.52
SRP54-204ENST00000553923 ABI1Q8IZP0 508 aa5.54□□□□□ -1.52
SRP54-204ENST00000553923 KCNF1Q9H3M0 494 aa5.54□□□□□ -1.52
SRP54-204ENST00000553923 ELP3Q9H9T3 547 aa5.54□□□□□ -1.52
SRP54-204ENST00000553923 SART1O43290 800 aaKnown RBP5.53□□□□□ -1.52
SRP54-204ENST00000553923 F13BP05160 661 aa5.53□□□□□ -1.52
SRP54-204ENST00000553923 MAP4P27816 1152 aaKnown RBP5.53□□□□□ -1.52
SRP54-204ENST00000553923 COL19A1Q14993 1142 aa5.53□□□□□ -1.52
SRP54-204ENST00000553923 PDE12Q6L8Q7 609 aaKnown RBP5.53□□□□□ -1.52
SRP54-204ENST00000553923 XKR5Q6UX68 686 aa5.53□□□□□ -1.52
SRP54-204ENST00000553923 SHISA5Q8N114 240 aa5.53□□□□□ -1.52
SRP54-204ENST00000553923 MKNK1Q9BUB5 465 aa5.53□□□□□ -1.52
SRP54-204ENST00000553923 RUSC1Q9BVN2 902 aa5.53□□□□□ -1.52
SRP54-204ENST00000553923 DZANK1Q9NVP4 752 aa5.53□□□□□ -1.52
SRP54-204ENST00000553923 PIM2Q9P1W9 311 aa5.53□□□□□ -1.52
SRP54-204ENST00000553923 SOX13Q9UN79 622 aa5.53□□□□□ -1.52
SRP54-204ENST00000553923 PRNPP04156 253 aa5.52□□□□□ -1.53
SRP54-204ENST00000553923 NLRP12P59046 1061 aa5.52□□□□□ -1.53
SRP54-204ENST00000553923 SGO2Q562F6 1265 aa5.52□□□□□ -1.53
SRP54-204ENST00000553923 MFSD14AQ96MC6 490 aa5.52□□□□□ -1.53
SRP54-204ENST00000553923 HHIPQ96QV1 700 aa5.52□□□□□ -1.53
SRP54-204ENST00000553923 TMPRSS13Q9BYE2 586 aa5.52□□□□□ -1.53
SRP54-204ENST00000553923 SLAIN2Q9P270 581 aa5.52□□□□□ -1.53
SRP54-204ENST00000553923 KANSL3Q9P2N6 904 aa5.52□□□□□ -1.53
SRP54-204ENST00000553923 TRPA1O75762 1119 aa5.51□□□□□ -1.53
SRP54-204ENST00000553923 TIAF1O95411 115 aa5.51□□□□□ -1.53
SRP54-204ENST00000553923 JAG1P78504 1218 aa5.51□□□□□ -1.53
SRP54-204ENST00000553923 ABTB2Q8N961 1025 aa5.51□□□□□ -1.53
SRP54-204ENST00000553923 C1orf127Q8N9H9 656 aa5.51□□□□□ -1.53
SRP54-204ENST00000553923 NUDT16Q96DE0 195 aaKnown RBP5.51□□□□□ -1.53
SRP54-204ENST00000553923 CHRDQ9H2X0 955 aa5.51□□□□□ -1.53
SRP54-204ENST00000553923 SUGCTQ9HAC7 445 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms