RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 TRPM4Q8TD43 1214 aa29.6■■■□□ 2.33
TDP1-205ENST00000553527 COA1Q9GZY4 146 aa29.6■■■□□ 2.33
TDP1-205ENST00000553527 TNNQ9UQP3 1299 aa29.6■■■□□ 2.33
TDP1-205ENST00000553527 USP17L3A6NCW0 530 aa29.59■■■□□ 2.33
TDP1-205ENST00000553527 USP17L4A6NCW7 530 aa29.59■■■□□ 2.33
TDP1-205ENST00000553527 RPS12P25398 132 aaKnown RBP29.59■■■□□ 2.33
TDP1-205ENST00000553527 HIRAP54198 1017 aaPredicted RBP29.59■■■□□ 2.33
TDP1-205ENST00000553527 USP17L1Q7RTZ2 530 aa29.59■■■□□ 2.33
TDP1-205ENST00000553527 CLUAP1Q96AJ1 413 aa29.59■■■□□ 2.33
TDP1-205ENST00000553527 TBC1D10BQ4KMP7 808 aaPredicted RBP29.58■■■□□ 2.33
TDP1-205ENST00000553527 RSBN1LQ6PCB5 846 aaPredicted RBP29.58■■■□□ 2.33
TDP1-205ENST00000553527 KLHDC4Q8TBB5 520 aa29.58■■■□□ 2.33
TDP1-205ENST00000553527 PASKQ96RG2 1323 aa29.58■■■□□ 2.33
TDP1-205ENST00000553527 TRIM27P14373 513 aa29.57■■■□□ 2.32
TDP1-205ENST00000553527 MXD3Q9BW11 206 aa29.57■■■□□ 2.32
TDP1-205ENST00000553527 POLR2AP24928 1970 aaKnown RBP29.57■■■□□ 2.32
TDP1-205ENST00000553527 FMR1Q06787 632 aaKnown RBP eCLIP29.56■■■□□ 2.32
TDP1-205ENST00000553527 ATF7IPQ6VMQ6 1270 aa29.56■■■□□ 2.32
TDP1-205ENST00000553527 EGFRP00533 1210 aa29.55■■■□□ 2.32
TDP1-205ENST00000553527 LRRC24Q50LG9 513 aa29.55■■■□□ 2.32
TDP1-205ENST00000553527 MEIS3Q99687 375 aa29.55■■■□□ 2.32
TDP1-205ENST00000553527 RIPOR2Q9Y4F9 1068 aa29.55■■■□□ 2.32
TDP1-205ENST00000553527 INTS3Q68E01 1043 aaKnown RBP29.54■■■□□ 2.32
TDP1-205ENST00000553527 LRRFIP2Q9Y608 721 aaKnown RBP29.54■■■□□ 2.32
TDP1-205ENST00000553527 TRAF5O00463 557 aa29.53■■■□□ 2.32
TDP1-205ENST00000553527 TTLL5Q6EMB2 1281 aa29.53■■■□□ 2.32
TDP1-205ENST00000553527 AGBL3Q8NEM8 1001 aa29.53■■■□□ 2.32
TDP1-205ENST00000553527 KLRG1Q96E93 195 aa29.53■■■□□ 2.32
TDP1-205ENST00000553527 CD209Q9NNX6 404 aa29.53■■■□□ 2.32
TDP1-205ENST00000553527 CREBZFQ9NS37 354 aa29.53■■■□□ 2.32
TDP1-205ENST00000553527 GTF2IP78347 998 aa29.52■■■□□ 2.32
TDP1-205ENST00000553527 METTL24Q5JXM2 366 aa29.52■■■□□ 2.32
TDP1-205ENST00000553527 ZKSCAN2Q63HK3 967 aa29.52■■■□□ 2.32
TDP1-205ENST00000553527 MROH5Q6ZUA9 1318 aa29.51■■■□□ 2.32
TDP1-205ENST00000553527 TMEM88BA6NKF7 163 aa29.51■■■□□ 2.31
TDP1-205ENST00000553527 DACT2Q5SW24 774 aa29.51■■■□□ 2.31
TDP1-205ENST00000553527 GLIS2Q9BZE0 524 aaPredicted RBP29.51■■■□□ 2.31
TDP1-205ENST00000553527 HDAC5Q9UQL6 1122 aa29.51■■■□□ 2.31
TDP1-205ENST00000553527 USP17L8P0C7I0 530 aa29.5■■■□□ 2.31
TDP1-205ENST00000553527 KIF4BQ2VIQ3 1234 aa29.5■■■□□ 2.31
TDP1-205ENST00000553527 STRIP1Q5VSL9 837 aa29.5■■■□□ 2.31
TDP1-205ENST00000553527 ZNF804AQ7Z570 1209 aa29.5■■■□□ 2.31
TDP1-205ENST00000553527 ZC3H15Q8WU90 426 aaKnown RBP29.5■■■□□ 2.31
TDP1-205ENST00000553527 IRS2Q9Y4H2 1338 aa29.49■■■□□ 2.31
TDP1-205ENST00000553527 C15orf52Q6ZUT6 534 aaKnown RBP29.49■■■□□ 2.31
TDP1-205ENST00000553527 GMLQ99445 158 aa29.49■■■□□ 2.31
TDP1-205ENST00000553527 MKRN1Q9UHC7 482 aaKnown RBP29.49■■■□□ 2.31
TDP1-205ENST00000553527 PGAP2Q9UHJ9 254 aa29.49■■■□□ 2.31
TDP1-205ENST00000553527 TRPM7Q96QT4 1865 aa29.48■■■□□ 2.31
TDP1-205ENST00000553527 UBE4AQ14139 1066 aa29.48■■■□□ 2.31
TDP1-205ENST00000553527 GNAI3P08754 354 aa29.47■■■□□ 2.31
TDP1-205ENST00000553527 GYG1P46976 350 aa29.47■■■□□ 2.31
TDP1-205ENST00000553527 RFX5P48382 616 aaPredicted RBP29.47■■■□□ 2.31
TDP1-205ENST00000553527 TMEM57Q8N5G2 664 aa29.47■■■□□ 2.31
TDP1-205ENST00000553527 SIL1Q9H173 461 aa29.47■■■□□ 2.31
TDP1-205ENST00000553527 JAG2Q9Y219 1238 aa29.47■■■□□ 2.31
TDP1-205ENST00000553527 ZNF646O15015 1829 aaPredicted RBP29.47■■■□□ 2.31
TDP1-205ENST00000553527 PTPN12Q05209 780 aaKnown RBP29.46■■■□□ 2.31
TDP1-205ENST00000553527 CDC37L1Q7L3B6 337 aa29.46■■■□□ 2.31
TDP1-205ENST00000553527 USP48Q86UV5 1035 aa29.46■■■□□ 2.31
TDP1-205ENST00000553527 ZNF280AP59817 542 aaPredicted RBP29.45■■■□□ 2.31
TDP1-205ENST00000553527 DLK2Q6UY11 383 aa29.45■■■□□ 2.31
TDP1-205ENST00000553527 OGFOD1Q8N543 542 aa29.45■■■□□ 2.31
TDP1-205ENST00000553527 DCPSQ96C86 337 aaKnown RBP29.45■■■□□ 2.31
TDP1-205ENST00000553527 ZNF408Q9H9D4 720 aa29.45■■■□□ 2.31
TDP1-205ENST00000553527 MYOZ2Q9NPC6 264 aa29.45■■■□□ 2.31
TDP1-205ENST00000553527 ABT1Q9ULW3 272 aaKnown RBP29.45■■■□□ 2.31
TDP1-205ENST00000553527 EYA2O00167 538 aa29.44■■■□□ 2.3
TDP1-205ENST00000553527 PDE8BO95263 885 aa29.44■■■□□ 2.3
TDP1-205ENST00000553527 KIAA0825Q8IV33 1275 aa29.44■■■□□ 2.3
TDP1-205ENST00000553527 FTSJ3Q8IY81 847 aaKnown RBP29.44■■■□□ 2.3
TDP1-205ENST00000553527 ASTN2O75129 1339 aaPredicted RBP29.44■■■□□ 2.3
TDP1-205ENST00000553527 MYO3BQ8WXR4 1341 aa29.44■■■□□ 2.3
TDP1-205ENST00000553527 IL1R1P14778 569 aa29.43■■■□□ 2.3
TDP1-205ENST00000553527 HIBADHP31937 336 aaKnown RBP29.43■■■□□ 2.3
TDP1-205ENST00000553527 SCARF1Q14162 830 aa29.43■■■□□ 2.3
TDP1-205ENST00000553527 CST9Q5W186 159 aa29.42■■■□□ 2.3
TDP1-205ENST00000553527 KRT26Q7Z3Y9 468 aa29.42■■■□□ 2.3
TDP1-205ENST00000553527 VPS37DQ86XT2 251 aa29.42■■■□□ 2.3
TDP1-205ENST00000553527 FAM84BQ96KN1 310 aaPredicted RBP29.42■■■□□ 2.3
TDP1-205ENST00000553527 PA2G4Q9UQ80 394 aaKnown RBP29.42■■■□□ 2.3
TDP1-205ENST00000553527 ZNF609O15014 1411 aa29.42■■■□□ 2.3
TDP1-205ENST00000553527 CELF2O95319 508 aaKnown RBP29.41■■■□□ 2.3
TDP1-205ENST00000553527 VGLL2Q8N8G2 317 aa29.41■■■□□ 2.3
TDP1-205ENST00000553527 GGA3Q9NZ52 723 aa29.41■■■□□ 2.3
TDP1-205ENST00000553527 F8W031 263 aaPredicted RBP29.4■■■□□ 2.3
TDP1-205ENST00000553527 DZIP1LQ8IYY4 767 aaKnown RBP29.4■■■□□ 2.3
TDP1-205ENST00000553527 RCAN3Q9UKA8 241 aa29.4■■■□□ 2.3
TDP1-205ENST00000553527 IQSEC3Q9UPP2 1182 aaPredicted RBP29.4■■■□□ 2.3
TDP1-205ENST00000553527 ADM5C9JUS6 153 aa29.39■■■□□ 2.3
TDP1-205ENST00000553527 SRGAP3O43295 1099 aa29.39■■■□□ 2.3
TDP1-205ENST00000553527 GNAI2P04899 355 aa29.39■■■□□ 2.3
TDP1-205ENST00000553527 CAVIN4Q5BKX8 364 aa29.39■■■□□ 2.3
TDP1-205ENST00000553527 ANGEL2Q5VTE6 544 aaKnown RBP29.39■■■□□ 2.3
TDP1-205ENST00000553527 ATG9AQ7Z3C6 839 aa29.39■■■□□ 2.3
TDP1-205ENST00000553527 HDAC9Q9UKV0 1011 aa29.39■■■□□ 2.3
TDP1-205ENST00000553527 PCNTO95613 3336 aa29.39■■■□□ 2.3
TDP1-205ENST00000553527 DEFB115Q30KQ5 88 aa29.38■■■□□ 2.29
TDP1-205ENST00000553527 NBPF9Q3BBW0 867 aa29.38■■■□□ 2.29
TDP1-205ENST00000553527 CERS5Q8N5B7 392 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms