RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 DNAJC2Q99543 621 aaKnown RBP18.38■□□□□ 0.53
ABCD4-218ENST00000553486 TM6SF1Q9BZW5 370 aa18.38■□□□□ 0.53
ABCD4-218ENST00000553486 AKAP2Q9Y2D5 859 aa18.38■□□□□ 0.53
ABCD4-218ENST00000553486 ZNF609O15014 1411 aa18.38■□□□□ 0.53
ABCD4-218ENST00000553486 CYP2E1P05181 493 aaPredicted RBP18.37■□□□□ 0.53
ABCD4-218ENST00000553486 TBC1D9BQ66K14 1250 aa18.37■□□□□ 0.53
ABCD4-218ENST00000553486 TBC1D2BQ9UPU7 963 aa18.37■□□□□ 0.53
ABCD4-218ENST00000553486 RBM8AQ9Y5S9 174 aaKnown RBP18.37■□□□□ 0.53
ABCD4-218ENST00000553486 MED23Q9ULK4 1368 aa18.37■□□□□ 0.53
ABCD4-218ENST00000553486 TIMM10P62072 90 aa18.37■□□□□ 0.53
ABCD4-218ENST00000553486 SKOR2Q2VWA4 1001 aaPredicted RBP18.37■□□□□ 0.53
ABCD4-218ENST00000553486 RNF20Q5VTR2 975 aa18.37■□□□□ 0.53
ABCD4-218ENST00000553486 TTLL6Q8N841 843 aa18.37■□□□□ 0.53
ABCD4-218ENST00000553486 EDC3Q96F86 508 aaKnown RBP18.37■□□□□ 0.53
ABCD4-218ENST00000553486 TTC14Q96N46 770 aa18.37■□□□□ 0.53
ABCD4-218ENST00000553486 PUS3Q9BZE2 481 aaKnown RBP18.37■□□□□ 0.53
ABCD4-218ENST00000553486 H0YIN7 160 aa18.36■□□□□ 0.53
ABCD4-218ENST00000553486 NOL8Q76FK4 1167 aaKnown RBP18.36■□□□□ 0.53
ABCD4-218ENST00000553486 C2CD5Q86YS7 1000 aa18.36■□□□□ 0.53
ABCD4-218ENST00000553486 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.36■□□□□ 0.53
ABCD4-218ENST00000553486 TRMT112Q9UI30 125 aaKnown RBP18.36■□□□□ 0.53
ABCD4-218ENST00000553486 A0A1B0GUL7 405 aa18.35■□□□□ 0.53
ABCD4-218ENST00000553486 CASTP20810 708 aaKnown RBP18.35■□□□□ 0.53
ABCD4-218ENST00000553486 CREB3L3Q68CJ9 461 aa18.35■□□□□ 0.53
ABCD4-218ENST00000553486 KBTBD3Q8NAB2 608 aa18.35■□□□□ 0.53
ABCD4-218ENST00000553486 SCN7AQ01118 1682 aa18.35■□□□□ 0.53
ABCD4-218ENST00000553486 SPEF2Q9C093 1822 aa18.35■□□□□ 0.53
ABCD4-218ENST00000553486 IRS4O14654 1257 aaPredicted RBP18.35■□□□□ 0.53
ABCD4-218ENST00000553486 BAG4O95429 457 aaKnown RBP18.35■□□□□ 0.53
ABCD4-218ENST00000553486 RASSF7Q02833 373 aa18.35■□□□□ 0.53
ABCD4-218ENST00000553486 ZNF34Q8IZ26 560 aa18.35■□□□□ 0.53
ABCD4-218ENST00000553486 PAG1Q9NWQ8 432 aa18.35■□□□□ 0.53
ABCD4-218ENST00000553486 CYP46A1Q9Y6A2 500 aa18.35■□□□□ 0.53
ABCD4-218ENST00000553486 ANKRD18BA2A2Z9 1011 aa18.34■□□□□ 0.53
ABCD4-218ENST00000553486 PDE8AO60658 829 aa18.34■□□□□ 0.53
ABCD4-218ENST00000553486 PSMA5P28066 241 aa18.34■□□□□ 0.53
ABCD4-218ENST00000553486 APLP1P51693 650 aa18.34■□□□□ 0.53
ABCD4-218ENST00000553486 CTSWP56202 376 aa18.34■□□□□ 0.53
ABCD4-218ENST00000553486 VPS53Q5VIR6 699 aa18.34■□□□□ 0.53
ABCD4-218ENST00000553486 TTLL11Q8NHH1 800 aa18.34■□□□□ 0.53
ABCD4-218ENST00000553486 JAKMIP1Q96N16 626 aaKnown RBP18.34■□□□□ 0.53
ABCD4-218ENST00000553486 ZSWIM6Q9HCJ5 1215 aa18.34■□□□□ 0.53
ABCD4-218ENST00000553486 LIMCH1Q9UPQ0 1083 aa18.34■□□□□ 0.53
ABCD4-218ENST00000553486 ZC3H4Q9UPT8 1303 aaKnown RBP18.33■□□□□ 0.53
ABCD4-218ENST00000553486 SLC27A2O14975 620 aa18.33■□□□□ 0.53
ABCD4-218ENST00000553486 CAMTA2O94983 1202 aa18.33■□□□□ 0.53
ABCD4-218ENST00000553486 IFIT1P09914 478 aaKnown RBP18.33■□□□□ 0.53
ABCD4-218ENST00000553486 AK2P54819 239 aa18.33■□□□□ 0.53
ABCD4-218ENST00000553486 CCDC158Q5M9N0 1113 aa18.33■□□□□ 0.53
ABCD4-218ENST00000553486 PRR5LQ6MZQ0 368 aa18.33■□□□□ 0.53
ABCD4-218ENST00000553486 RBM46Q8TBY0 533 aaKnown RBP18.33■□□□□ 0.53
ABCD4-218ENST00000553486 CCDC85AQ96PX6 553 aaPredicted RBP18.33■□□□□ 0.53
ABCD4-218ENST00000553486 BRIP1Q9BX63 1249 aa18.33■□□□□ 0.53
ABCD4-218ENST00000553486 PDRG1Q9NUG6 133 aa18.33■□□□□ 0.53
ABCD4-218ENST00000553486 HMG20BQ9P0W2 317 aa18.33■□□□□ 0.53
ABCD4-218ENST00000553486 DLEC1Q9Y238 1755 aa18.33■□□□□ 0.53
ABCD4-218ENST00000553486 TAF5LO75529 589 aa18.33■□□□□ 0.52
ABCD4-218ENST00000553486 LMNB1P20700 586 aa18.33■□□□□ 0.52
ABCD4-218ENST00000553486 MCMDC2Q4G0Z9 681 aa18.33■□□□□ 0.52
ABCD4-218ENST00000553486 DDX46Q7L014 1031 aaKnown RBP18.33■□□□□ 0.52
ABCD4-218ENST00000553486 SYNE4Q8N205 404 aa18.33■□□□□ 0.52
ABCD4-218ENST00000553486 ITGA6P23229 1130 aa18.32■□□□□ 0.52
ABCD4-218ENST00000553486 PDE6BP35913 854 aa18.32■□□□□ 0.52
ABCD4-218ENST00000553486 GORABQ5T7V8 394 aa18.32■□□□□ 0.52
ABCD4-218ENST00000553486 RUFY3Q7L099 469 aa18.32■□□□□ 0.52
ABCD4-218ENST00000553486 ZNF589Q86UQ0 364 aaPredicted RBP18.32■□□□□ 0.52
ABCD4-218ENST00000553486 SETDB2Q96T68 719 aa18.32■□□□□ 0.52
ABCD4-218ENST00000553486 NDUFB9Q9Y6M9 179 aa18.32■□□□□ 0.52
ABCD4-218ENST00000553486 PCNTO95613 3336 aa18.31■□□□□ 0.52
ABCD4-218ENST00000553486 SH3TC1Q8TE82 1336 aa18.31■□□□□ 0.52
ABCD4-218ENST00000553486 GOLIM4O00461 696 aa18.31■□□□□ 0.52
ABCD4-218ENST00000553486 PRELPP51888 382 aa18.31■□□□□ 0.52
ABCD4-218ENST00000553486 ADCK5Q3MIX3 580 aa18.31■□□□□ 0.52
ABCD4-218ENST00000553486 ZSCAN31Q96LW9 406 aaPredicted RBP18.31■□□□□ 0.52
ABCD4-218ENST00000553486 UBN2Q6ZU65 1347 aa18.31■□□□□ 0.52
ABCD4-218ENST00000553486 SBF1O95248 1867 aa18.3■□□□□ 0.52
ABCD4-218ENST00000553486 PKP1Q13835 747 aa18.3■□□□□ 0.52
ABCD4-218ENST00000553486 LRRFIP1Q32MZ4 808 aaKnown RBP18.3■□□□□ 0.52
ABCD4-218ENST00000553486 TSGA10IPQ3SY00 556 aa18.3■□□□□ 0.52
ABCD4-218ENST00000553486 TTC39AQ5SRH9 613 aa18.3■□□□□ 0.52
ABCD4-218ENST00000553486 LDHAL6AQ6ZMR3 332 aa18.3■□□□□ 0.52
ABCD4-218ENST00000553486 CCDC24Q8N4L8 307 aa18.3■□□□□ 0.52
ABCD4-218ENST00000553486 CNBD1Q8NA66 436 aa18.3■□□□□ 0.52
ABCD4-218ENST00000553486 GREM2Q9H772 168 aa18.3■□□□□ 0.52
ABCD4-218ENST00000553486 HELLSQ9NRZ9 838 aa18.3■□□□□ 0.52
ABCD4-218ENST00000553486 RIPOR2Q9Y4F9 1068 aa18.3■□□□□ 0.52
ABCD4-218ENST00000553486 NFKBIEO00221 500 aa18.3■□□□□ 0.52
ABCD4-218ENST00000553486 PARP10Q53GL7 1025 aa18.3■□□□□ 0.52
ABCD4-218ENST00000553486 METTL24Q5JXM2 366 aa18.3■□□□□ 0.52
ABCD4-218ENST00000553486 XAGE2Q96GT9 111 aa18.3■□□□□ 0.52
ABCD4-218ENST00000553486 RRAGCQ9HB90 399 aa18.3■□□□□ 0.52
ABCD4-218ENST00000553486 ZDHHC9Q9Y397 364 aa18.3■□□□□ 0.52
ABCD4-218ENST00000553486 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.3■□□□□ 0.52
ABCD4-218ENST00000553486 U3KPZ7 1027 aaPredicted RBP18.3■□□□□ 0.52
ABCD4-218ENST00000553486 KRT32Q14532 448 aa18.29■□□□□ 0.52
ABCD4-218ENST00000553486 ZNF622Q969S3 477 aaKnown RBP eCLIP18.29■□□□□ 0.52
ABCD4-218ENST00000553486 SH2B1Q9NRF2 756 aaPredicted RBP18.29■□□□□ 0.52
ABCD4-218ENST00000553486 CNNM1Q9NRU3 951 aa18.29■□□□□ 0.52
ABCD4-218ENST00000553486 RPAP1Q9BWH6 1393 aaPredicted RBP18.29■□□□□ 0.52
ABCD4-218ENST00000553486 NPHP1O15259 732 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms