RNA–Protein interactions for RNA: ENST00000552744.5

SYT1-212, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-212ENST00000552744 IFNKQ9P0W0 207 aa9.12□□□□□ -0.95
SYT1-212ENST00000552744 ATP5J2-PTCD1G3V325 749 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 RNMTO43148 476 aaKnown RBP9.11□□□□□ -0.95
SYT1-212ENST00000552744 PTCD1O75127 700 aaKnown RBP9.11□□□□□ -0.95
SYT1-212ENST00000552744 CAVIN2O95810 425 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 HOXB7P09629 217 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 ADD1P35611 737 aaKnown RBP9.11□□□□□ -0.95
SYT1-212ENST00000552744 RBM6P78332 1123 aaKnown RBP9.11□□□□□ -0.95
SYT1-212ENST00000552744 TERF2Q15554 542 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 DPCR1Q3MIW9 517 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 AKAP4Q5JQC9 854 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 NSUN7Q8NE18 718 aaKnown RBP9.11□□□□□ -0.95
SYT1-212ENST00000552744 XPO4Q9C0E2 1151 aaKnown RBP9.11□□□□□ -0.95
SYT1-212ENST00000552744 GJB4Q9NTQ9 266 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 CTAGE5O15320 804 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 CTDNEP1O95476 244 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 CDC25BP30305 580 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 FAM160A1Q05DH4 1040 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 GABPB1Q06547 395 aaPredicted RBP9.11□□□□□ -0.95
SYT1-212ENST00000552744 SARM1Q6SZW1 724 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 COPS6Q7L5N1 327 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 UBE3BQ7Z3V4 1068 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 ZBTB9Q96C00 473 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 RCOR1Q9UKL0 485 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 GOLIM4O00461 696 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 NEMFO60524 1076 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 KCNA6P17658 529 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 LMOD1P29536 600 aaPredicted RBP9.11□□□□□ -0.95
SYT1-212ENST00000552744 MCMDC2Q4G0Z9 681 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 XAGE3Q8WTP9 111 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 IP6K1Q92551 441 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 ERO1AQ96HE7 468 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 NAT10Q9H0A0 1025 aaKnown RBP9.11□□□□□ -0.95
SYT1-212ENST00000552744 GPHNQ9NQX3 736 aaPredicted RBP9.11□□□□□ -0.95
SYT1-212ENST00000552744 PCDHA7Q9UN72 937 aa9.11□□□□□ -0.95
SYT1-212ENST00000552744 SFPQP23246 707 aaKnown RBP eCLIP9.1□□□□□ -0.95
SYT1-212ENST00000552744 NDUFA8P51970 172 aa9.1□□□□□ -0.95
SYT1-212ENST00000552744 PSME1Q06323 249 aa9.1□□□□□ -0.95
SYT1-212ENST00000552744 STK38Q15208 465 aa9.1□□□□□ -0.95
SYT1-212ENST00000552744 TNNI3KQ59H18 835 aa9.1□□□□□ -0.95
SYT1-212ENST00000552744 E4F1Q66K89 784 aaPredicted RBP9.1□□□□□ -0.95
SYT1-212ENST00000552744 ZNF396Q96N95 335 aaPredicted RBP9.1□□□□□ -0.95
SYT1-212ENST00000552744 TMX1Q9H3N1 280 aa9.1□□□□□ -0.95
SYT1-212ENST00000552744 FPGT-TNNI3KV9GXZ4 949 aa9.1□□□□□ -0.95
SYT1-212ENST00000552744 SLIT1O75093 1534 aa9.1□□□□□ -0.95
SYT1-212ENST00000552744 LRRC37A3O60309 1634 aa9.1□□□□□ -0.95
SYT1-212ENST00000552744 PIK3C2AO00443 1686 aa9.1□□□□□ -0.95
SYT1-212ENST00000552744 HAND2P61296 217 aa9.1□□□□□ -0.95
SYT1-212ENST00000552744 HSP90AA4PQ58FG1 418 aa9.1□□□□□ -0.95
SYT1-212ENST00000552744 DHX32Q7L7V1 743 aaKnown RBP9.1□□□□□ -0.95
SYT1-212ENST00000552744 NBPF11Q86T75 865 aa9.1□□□□□ -0.95
SYT1-212ENST00000552744 ZNF446Q9NWS9 450 aa9.1□□□□□ -0.95
SYT1-212ENST00000552744 NWD1Q149M9 1564 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 ZNF609O15014 1411 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 NEURL1BA8MQ27 555 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 TIMM10P62072 90 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 GOLGA8FQ08AF8 430 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 GOLGA8DPQ0D2H9 430 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 GCKRQ14397 625 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 TSGA10IPQ3SY00 556 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 ARHGAP29Q52LW3 1261 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 USPL1Q5W0Q7 1092 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 TTLL5Q6EMB2 1281 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 MRPS27Q92552 414 aaKnown RBP9.09□□□□□ -0.95
SYT1-212ENST00000552744 DDX21Q9NR30 783 aaKnown RBP eCLIP9.09□□□□□ -0.95
SYT1-212ENST00000552744 DNAI1Q9UI46 699 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 CLIC4Q9Y696 253 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 TOPAZ1Q8N9V7 1692 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 POLR3GO15318 223 aaPredicted RBP9.09□□□□□ -0.95
SYT1-212ENST00000552744 PFKFB2O60825 505 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 ATP5JP18859 108 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 ESCO1Q5FWF5 840 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 ARMCX5Q6P1M9 558 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 ENGASEQ8NFI3 743 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 SMARCC2Q8TAQ2 1214 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 PPP1R13BQ96KQ4 1090 aa9.09□□□□□ -0.95
SYT1-212ENST00000552744 ALDH8A1Q9H2A2 487 aaPredicted RBP9.09□□□□□ -0.95
SYT1-212ENST00000552744 GSDMDP57764 484 aa9.08□□□□□ -0.96
SYT1-212ENST00000552744 SNRKQ9NRH2 765 aa9.08□□□□□ -0.96
SYT1-212ENST00000552744 PHF8Q9UPP1 1060 aa9.08□□□□□ -0.96
SYT1-212ENST00000552744 CRYBG1Q9Y4K1 1723 aa9.08□□□□□ -0.96
SYT1-212ENST00000552744 URI1O94763 535 aaPredicted RBP9.08□□□□□ -0.96
SYT1-212ENST00000552744 ATP1A3P13637 1013 aa9.08□□□□□ -0.96
SYT1-212ENST00000552744 MARCKSP29966 332 aaPredicted RBP9.08□□□□□ -0.96
SYT1-212ENST00000552744 PTPN12Q05209 780 aaKnown RBP9.08□□□□□ -0.96
SYT1-212ENST00000552744 NAA16Q6N069 864 aaPredicted RBP9.08□□□□□ -0.96
SYT1-212ENST00000552744 EPC1Q9H2F5 836 aa9.08□□□□□ -0.96
SYT1-212ENST00000552744 PLEKHG1Q9ULL1 1385 aa9.08□□□□□ -0.96
SYT1-212ENST00000552744 ARHGAP23Q9P227 1491 aa9.08□□□□□ -0.96
SYT1-212ENST00000552744 A0A087WZG4 1122 aa9.07□□□□□ -0.96
SYT1-212ENST00000552744 VGLL3A8MV65 326 aa9.07□□□□□ -0.96
SYT1-212ENST00000552744 E7EWF7 191 aa9.07□□□□□ -0.96
SYT1-212ENST00000552744 SLC3A2P08195 630 aaKnown RBP9.07□□□□□ -0.96
SYT1-212ENST00000552744 PDIA3P30101 505 aaKnown RBP9.07□□□□□ -0.96
SYT1-212ENST00000552744 HSP90AB3PQ58FF7 597 aa9.07□□□□□ -0.96
SYT1-212ENST00000552744 FMR1NBQ8N0W7 255 aaPredicted RBP9.07□□□□□ -0.96
SYT1-212ENST00000552744 NOL10Q9BSC4 688 aaKnown RBP9.07□□□□□ -0.96
SYT1-212ENST00000552744 KIAA1468Q9P260 1216 aa9.07□□□□□ -0.96
SYT1-212ENST00000552744 ADGRL3Q9HAR2 1447 aa9.07□□□□□ -0.96
SYT1-212ENST00000552744 NRDCO43847 1150 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms