RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 USP17L1Q7RTZ2 530 aa16.52■□□□□ 0.24
SNRPF-204ENST00000552085 CLMNQ96JQ2 1002 aa16.52■□□□□ 0.24
SNRPF-204ENST00000552085 THUMPD2Q9BTF0 503 aaKnown RBP16.52■□□□□ 0.24
SNRPF-204ENST00000552085 PODXL2Q9NZ53 605 aa16.52■□□□□ 0.24
SNRPF-204ENST00000552085 DLG5Q8TDM6 1919 aa16.51■□□□□ 0.23
SNRPF-204ENST00000552085 SF3B3Q15393 1217 aaKnown RBP16.51■□□□□ 0.23
SNRPF-204ENST00000552085 LRP10Q7Z4F1 713 aa16.51■□□□□ 0.23
SNRPF-204ENST00000552085 UBE2Q1Q7Z7E8 422 aa16.51■□□□□ 0.23
SNRPF-204ENST00000552085 APOBEC3FQ8IUX4 373 aaKnown RBP16.51■□□□□ 0.23
SNRPF-204ENST00000552085 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.51■□□□□ 0.23
SNRPF-204ENST00000552085 PNISRQ8TF01 805 aaKnown RBP16.51■□□□□ 0.23
SNRPF-204ENST00000552085 PTPN18Q99952 460 aa16.51■□□□□ 0.23
SNRPF-204ENST00000552085 PRDM6Q9NQX0 595 aa16.51■□□□□ 0.23
SNRPF-204ENST00000552085 Q7L0L9 218 aa16.5■□□□□ 0.23
SNRPF-204ENST00000552085 OGFOD1Q8N543 542 aa16.5■□□□□ 0.23
SNRPF-204ENST00000552085 NKX2-3Q8TAU0 364 aa16.5■□□□□ 0.23
SNRPF-204ENST00000552085 GGA1Q9UJY5 639 aa16.5■□□□□ 0.23
SNRPF-204ENST00000552085 COL1A1P02452 1464 aaPredicted RBP16.49■□□□□ 0.23
SNRPF-204ENST00000552085 UNC80Q8N2C7 3258 aa16.49■□□□□ 0.23
SNRPF-204ENST00000552085 TESPA1A2RU30 521 aaPredicted RBP16.49■□□□□ 0.23
SNRPF-204ENST00000552085 SASH1O94885 1247 aa16.49■□□□□ 0.23
SNRPF-204ENST00000552085 RPS8P62241 208 aaKnown RBP16.49■□□□□ 0.23
SNRPF-204ENST00000552085 ANKIB1Q9P2G1 1089 aa16.49■□□□□ 0.23
SNRPF-204ENST00000552085 ECM29Q5VYK3 1845 aa16.48■□□□□ 0.23
SNRPF-204ENST00000552085 UNCXA6NJT0 531 aa16.48■□□□□ 0.23
SNRPF-204ENST00000552085 GJA5P36382 358 aa16.48■□□□□ 0.23
SNRPF-204ENST00000552085 MTFR1Q15390 333 aa16.48■□□□□ 0.23
SNRPF-204ENST00000552085 CC2D1BQ5T0F9 858 aaKnown RBP16.48■□□□□ 0.23
SNRPF-204ENST00000552085 MTMR10Q9NXD2 777 aa16.48■□□□□ 0.23
SNRPF-204ENST00000552085 STAP2Q9UGK3 403 aa16.48■□□□□ 0.23
SNRPF-204ENST00000552085 PPP1R12BO60237 982 aaPredicted RBP16.47■□□□□ 0.23
SNRPF-204ENST00000552085 PDIA6Q15084 440 aa16.47■□□□□ 0.23
SNRPF-204ENST00000552085 PODNQ7Z5L7 613 aa16.47■□□□□ 0.23
SNRPF-204ENST00000552085 OTOFQ9HC10 1997 aa16.47■□□□□ 0.23
SNRPF-204ENST00000552085 SSC5DA1L4H1 1573 aa16.47■□□□□ 0.23
SNRPF-204ENST00000552085 GJA8P48165 433 aa16.46■□□□□ 0.23
SNRPF-204ENST00000552085 ZNF428Q96B54 188 aa16.46■□□□□ 0.23
SNRPF-204ENST00000552085 ZFYVE28Q9HCC9 887 aa16.46■□□□□ 0.23
SNRPF-204ENST00000552085 LAMA3Q16787 3333 aa16.46■□□□□ 0.23
SNRPF-204ENST00000552085 ALPK3Q96L96 1907 aa16.45■□□□□ 0.22
SNRPF-204ENST00000552085 ANXA1P04083 346 aa16.45■□□□□ 0.22
SNRPF-204ENST00000552085 HSPA5P11021 654 aaKnown RBP16.45■□□□□ 0.22
SNRPF-204ENST00000552085 EIF4G2P78344 907 aaKnown RBP eCLIP16.45■□□□□ 0.22
SNRPF-204ENST00000552085 TAF1CQ15572 869 aaPredicted RBP16.45■□□□□ 0.22
SNRPF-204ENST00000552085 PROSER3Q2NL68 480 aa16.45■□□□□ 0.22
SNRPF-204ENST00000552085 MXD3Q9BW11 206 aa16.45■□□□□ 0.22
SNRPF-204ENST00000552085 MYO3BQ8WXR4 1341 aa16.45■□□□□ 0.22
SNRPF-204ENST00000552085 EVI5O60447 810 aa16.44■□□□□ 0.22
SNRPF-204ENST00000552085 GJB1P08034 283 aa16.44■□□□□ 0.22
SNRPF-204ENST00000552085 MMP14P50281 582 aa16.44■□□□□ 0.22
SNRPF-204ENST00000552085 PRMT2P55345 433 aa16.44■□□□□ 0.22
SNRPF-204ENST00000552085 KIF22Q14807 665 aa16.44■□□□□ 0.22
SNRPF-204ENST00000552085 DACT2Q5SW24 774 aa16.44■□□□□ 0.22
SNRPF-204ENST00000552085 COPS6Q7L5N1 327 aa16.44■□□□□ 0.22
SNRPF-204ENST00000552085 FAM89AQ96GI7 184 aa16.44■□□□□ 0.22
SNRPF-204ENST00000552085 ARHGAP39Q9C0H5 1083 aa16.44■□□□□ 0.22
SNRPF-204ENST00000552085 DEFB129Q9H1M3 183 aa16.44■□□□□ 0.22
SNRPF-204ENST00000552085 GNRH1P01148 92 aa16.43■□□□□ 0.22
SNRPF-204ENST00000552085 AIMP1Q12904 312 aaKnown RBP16.43■□□□□ 0.22
SNRPF-204ENST00000552085 FARP2O94887 1054 aaPredicted RBP16.42■□□□□ 0.22
SNRPF-204ENST00000552085 EIF2S2P20042 333 aaKnown RBP16.42■□□□□ 0.22
SNRPF-204ENST00000552085 BMP8BP34820 402 aa16.42■□□□□ 0.22
SNRPF-204ENST00000552085 LACTBP83111 547 aaPredicted RBP16.42■□□□□ 0.22
SNRPF-204ENST00000552085 XAGE3Q8WTP9 111 aa16.42■□□□□ 0.22
SNRPF-204ENST00000552085 MS4A4AQ96JQ5 239 aa16.42■□□□□ 0.22
SNRPF-204ENST00000552085 U2AF1L5P0DN76 240 aaPredicted RBP16.41■□□□□ 0.22
SNRPF-204ENST00000552085 IREB2P48200 963 aaKnown RBP16.41■□□□□ 0.22
SNRPF-204ENST00000552085 U2AF1Q01081 240 aaKnown RBP eCLIP16.41■□□□□ 0.22
SNRPF-204ENST00000552085 PPP4R3CPQ6ZMV5 832 aa16.41■□□□□ 0.22
SNRPF-204ENST00000552085 ANKRD13AQ8IZ07 590 aa16.41■□□□□ 0.22
SNRPF-204ENST00000552085 FBXW7Q969H0 707 aa16.41■□□□□ 0.22
SNRPF-204ENST00000552085 ZBED3Q96IU2 234 aaPredicted RBP16.41■□□□□ 0.22
SNRPF-204ENST00000552085 NUDCQ9Y266 331 aa16.41■□□□□ 0.22
SNRPF-204ENST00000552085 PPP2R3BQ9Y5P8 575 aa16.41■□□□□ 0.22
SNRPF-204ENST00000552085 PER1O15534 1290 aaPredicted RBP16.4■□□□□ 0.22
SNRPF-204ENST00000552085 CCL5P13501 91 aa16.4■□□□□ 0.22
SNRPF-204ENST00000552085 ATP2B4P23634 1241 aa16.4■□□□□ 0.22
SNRPF-204ENST00000552085 LRIT3Q3SXY7 679 aa16.4■□□□□ 0.22
SNRPF-204ENST00000552085 SUPT20HL1Q3ZLR7 823 aa16.4■□□□□ 0.22
SNRPF-204ENST00000552085 STRIP1Q5VSL9 837 aa16.4■□□□□ 0.22
SNRPF-204ENST00000552085 BRI3BPQ8WY22 251 aa16.4■□□□□ 0.22
SNRPF-204ENST00000552085 OPTNQ96CV9 577 aa16.4■□□□□ 0.22
SNRPF-204ENST00000552085 CFAP53Q96M91 514 aa16.4■□□□□ 0.22
SNRPF-204ENST00000552085 GDF15Q99988 308 aa16.4■□□□□ 0.22
SNRPF-204ENST00000552085 SEC31BQ9NQW1 1179 aa16.4■□□□□ 0.22
SNRPF-204ENST00000552085 XDHP47989 1333 aa16.4■□□□□ 0.22
SNRPF-204ENST00000552085 COL9A1P20849 921 aa16.39■□□□□ 0.21
SNRPF-204ENST00000552085 RNF208Q9H0X6 261 aa16.39■□□□□ 0.21
SNRPF-204ENST00000552085 CCL15-CCL14A0A0B4J2E2 113 aa16.38■□□□□ 0.21
SNRPF-204ENST00000552085 USP2O75604 605 aaPredicted RBP16.38■□□□□ 0.21
SNRPF-204ENST00000552085 WDHD1O75717 1129 aaPredicted RBP16.38■□□□□ 0.21
SNRPF-204ENST00000552085 GRK4P32298 578 aa16.38■□□□□ 0.21
SNRPF-204ENST00000552085 BCAMP50895 628 aa16.38■□□□□ 0.21
SNRPF-204ENST00000552085 CCL15Q16663 113 aa16.38■□□□□ 0.21
SNRPF-204ENST00000552085 FAM43AQ8N2R8 423 aa16.38■□□□□ 0.21
SNRPF-204ENST00000552085 ELP3Q9H9T3 547 aa16.38■□□□□ 0.21
SNRPF-204ENST00000552085 MED23Q9ULK4 1368 aa16.38■□□□□ 0.21
SNRPF-204ENST00000552085 IRS4O14654 1257 aaPredicted RBP16.37■□□□□ 0.21
SNRPF-204ENST00000552085 TLR2O60603 784 aa16.37■□□□□ 0.21
SNRPF-204ENST00000552085 RTL5Q5HYW3 569 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms