RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 ARID4AP29374 1257 aaPredicted RBP15.16■□□□□ 0.02
CACNB3-217ENST00000550483 RPS8P62241 208 aaKnown RBP15.16■□□□□ 0.02
CACNB3-217ENST00000550483 ZNF526Q8TF50 670 aaPredicted RBP15.16■□□□□ 0.02
CACNB3-217ENST00000550483 DNAJC2Q99543 621 aaKnown RBP15.16■□□□□ 0.02
CACNB3-217ENST00000550483 PNPLA7Q6ZV29 1317 aa15.16■□□□□ 0.02
CACNB3-217ENST00000550483 CHRNDQ07001 517 aa15.15■□□□□ 0.02
CACNB3-217ENST00000550483 PRR5LQ6MZQ0 368 aa15.15■□□□□ 0.02
CACNB3-217ENST00000550483 CWC27Q6UX04 472 aaKnown RBP15.15■□□□□ 0.02
CACNB3-217ENST00000550483 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.15■□□□□ 0.02
CACNB3-217ENST00000550483 HELLSQ9NRZ9 838 aa15.15■□□□□ 0.02
CACNB3-217ENST00000550483 GNL3LQ9NVN8 582 aaKnown RBP15.15■□□□□ 0.02
CACNB3-217ENST00000550483 MED23Q9ULK4 1368 aa15.14■□□□□ 0.01
CACNB3-217ENST00000550483 ST18O60284 1047 aa15.14■□□□□ 0.01
CACNB3-217ENST00000550483 HSPA6P17066 643 aa15.14■□□□□ 0.01
CACNB3-217ENST00000550483 HSPA4P34932 840 aa15.14■□□□□ 0.01
CACNB3-217ENST00000550483 MCM2P49736 904 aa15.14■□□□□ 0.01
CACNB3-217ENST00000550483 GRAPQ13588 217 aa15.14■□□□□ 0.01
CACNB3-217ENST00000550483 CRY2Q49AN0 593 aa15.14■□□□□ 0.01
CACNB3-217ENST00000550483 TMED8Q6PL24 325 aaPredicted RBP15.14■□□□□ 0.01
CACNB3-217ENST00000550483 GRAPLQ8TC17 118 aaPredicted RBP15.14■□□□□ 0.01
CACNB3-217ENST00000550483 SLC16A10Q8TF71 515 aa15.14■□□□□ 0.01
CACNB3-217ENST00000550483 RBM17Q96I25 401 aaKnown RBP15.14■□□□□ 0.01
CACNB3-217ENST00000550483 KLRG2A4D1S0 409 aaPredicted RBP15.13■□□□□ 0.01
CACNB3-217ENST00000550483 POLRMTO00411 1230 aaKnown RBP15.13■□□□□ 0.01
CACNB3-217ENST00000550483 GOLIM4O00461 696 aa15.13■□□□□ 0.01
CACNB3-217ENST00000550483 SEMA3EO15041 775 aa15.13■□□□□ 0.01
CACNB3-217ENST00000550483 GRIN3BO60391 1043 aa15.13■□□□□ 0.01
CACNB3-217ENST00000550483 NMIQ13287 307 aaPredicted RBP15.13■□□□□ 0.01
CACNB3-217ENST00000550483 QSER1Q2KHR3 1735 aa15.13■□□□□ 0.01
CACNB3-217ENST00000550483 RNF20Q5VTR2 975 aa15.13■□□□□ 0.01
CACNB3-217ENST00000550483 CCDC102BQ68D86 513 aa15.13■□□□□ 0.01
CACNB3-217ENST00000550483 SMIM5Q71RC9 77 aa15.13■□□□□ 0.01
CACNB3-217ENST00000550483 RPGRQ92834 1020 aaKnown RBP15.13■□□□□ 0.01
CACNB3-217ENST00000550483 LSG1Q9H089 658 aaKnown RBP15.13■□□□□ 0.01
CACNB3-217ENST00000550483 CCDC171Q6TFL3 1326 aa15.13■□□□□ 0.01
CACNB3-217ENST00000550483 ADORA1P30542 326 aa15.12■□□□□ 0.01
CACNB3-217ENST00000550483 MCMDC2Q4G0Z9 681 aa15.12■□□□□ 0.01
CACNB3-217ENST00000550483 CAVIN4Q5BKX8 364 aa15.12■□□□□ 0.01
CACNB3-217ENST00000550483 COL23A1Q86Y22 540 aaPredicted RBP15.12■□□□□ 0.01
CACNB3-217ENST00000550483 KIF2CQ99661 725 aa15.12■□□□□ 0.01
CACNB3-217ENST00000550483 GPBP1L1Q9HC44 474 aaPredicted RBP15.12■□□□□ 0.01
CACNB3-217ENST00000550483 HMG20BQ9P0W2 317 aa15.12■□□□□ 0.01
CACNB3-217ENST00000550483 MINPP1Q9UNW1 487 aa15.12■□□□□ 0.01
CACNB3-217ENST00000550483 PDS5AQ29RF7 1337 aaKnown RBP15.12■□□□□ 0.01
CACNB3-217ENST00000550483 RNF113AO15541 343 aaKnown RBP15.11■□□□□ 0.01
CACNB3-217ENST00000550483 BBOX1O75936 387 aa15.11■□□□□ 0.01
CACNB3-217ENST00000550483 ZKSCAN1P17029 563 aaPredicted RBP15.11■□□□□ 0.01
CACNB3-217ENST00000550483 HOXA10P31260 410 aaPredicted RBP15.11■□□□□ 0.01
CACNB3-217ENST00000550483 C3orf67Q6ZVT6 689 aa15.11■□□□□ 0.01
CACNB3-217ENST00000550483 CRAMP1Q96RY5 1269 aa15.11■□□□□ 0.01
CACNB3-217ENST00000550483 BRIP1Q9BX63 1249 aa15.11■□□□□ 0.01
CACNB3-217ENST00000550483 TBC1D2Q9BYX2 928 aa15.11■□□□□ 0.01
CACNB3-217ENST00000550483 PARP3Q9Y6F1 533 aa15.11■□□□□ 0.01
CACNB3-217ENST00000550483 NRXN2Q9P2S2 1712 aa15.11■□□□□ 0.01
CACNB3-217ENST00000550483 MSH5O43196 834 aa15.1■□□□□ 0.01
CACNB3-217ENST00000550483 KCNJ4P48050 445 aa15.1■□□□□ 0.01
CACNB3-217ENST00000550483 FKBP4Q02790 459 aaKnown RBP eCLIP15.1■□□□□ 0.01
CACNB3-217ENST00000550483 MSL1Q68DK7 614 aa15.1■□□□□ 0.01
CACNB3-217ENST00000550483 CELF1Q92879 486 aaKnown RBP15.1■□□□□ 0.01
CACNB3-217ENST00000550483 MAP4K1Q92918 833 aa15.1■□□□□ 0.01
CACNB3-217ENST00000550483 KCNB2Q92953 911 aa15.1■□□□□ 0.01
CACNB3-217ENST00000550483 LEMD3Q9Y2U8 911 aa15.1■□□□□ 0.01
CACNB3-217ENST00000550483 ZNF804BA4D1E1 1349 aa15.1■□□□□ 0.01
CACNB3-217ENST00000550483 TNRC6CQ9HCJ0 1690 aaKnown RBP15.09■□□□□ 0.01
CACNB3-217ENST00000550483 A0A0D9SFI3 127 aa15.09■□□□□ 0.01
CACNB3-217ENST00000550483 PDE6BP35913 854 aa15.09■□□□□ 0.01
CACNB3-217ENST00000550483 MCAMP43121 646 aa15.09■□□□□ 0.01
CACNB3-217ENST00000550483 DDR1Q08345 913 aa15.09■□□□□ 0.01
CACNB3-217ENST00000550483 ZMYM1Q5SVZ6 1142 aa15.09■□□□□ 0.01
CACNB3-217ENST00000550483 WWC3Q9ULE0 1092 aa15.09■□□□□ 0.01
CACNB3-217ENST00000550483 U3KPZ7 1027 aaPredicted RBP15.09■□□□□ 0.01
CACNB3-217ENST00000550483 ZAP70P43403 619 aa15.08■□□□□ 0
CACNB3-217ENST00000550483 PHKA1P46020 1223 aa15.08■□□□□ 0
CACNB3-217ENST00000550483 KRT32Q14532 448 aa15.08■□□□□ 0
CACNB3-217ENST00000550483 UBE3CQ15386 1083 aa15.08■□□□□ 0
CACNB3-217ENST00000550483 SPATA5Q8NB90 893 aa15.08■□□□□ 0
CACNB3-217ENST00000550483 HELBQ8NG08 1087 aaPredicted RBP15.08■□□□□ 0
CACNB3-217ENST00000550483 APPBP2Q92624 585 aa15.08■□□□□ 0
CACNB3-217ENST00000550483 FAM227BQ96M60 508 aa15.08■□□□□ 0
CACNB3-217ENST00000550483 DSCC1Q9BVC3 393 aa15.08■□□□□ 0
CACNB3-217ENST00000550483 TM6SF1Q9BZW5 370 aa15.08■□□□□ 0
CACNB3-217ENST00000550483 DENND2AQ9ULE3 1009 aa15.08■□□□□ 0
CACNB3-217ENST00000550483 XDHP47989 1333 aa15.08■□□□□ 0
CACNB3-217ENST00000550483 A0A1B0GUL6 1792 aa15.07■□□□□ 0
CACNB3-217ENST00000550483 K7ELQ4 463 aaPredicted RBP15.07■□□□□ 0
CACNB3-217ENST00000550483 TAF5LO75529 589 aa15.07■□□□□ 0
CACNB3-217ENST00000550483 PSMA5P28066 241 aa15.07■□□□□ 0
CACNB3-217ENST00000550483 MAP3K12Q12852 859 aa15.07■□□□□ 0
CACNB3-217ENST00000550483 C15orf52Q6ZUT6 534 aaKnown RBP15.07■□□□□ 0
CACNB3-217ENST00000550483 VPS37DQ86XT2 251 aa15.07■□□□□ 0
CACNB3-217ENST00000550483 EDC3Q96F86 508 aaKnown RBP15.07■□□□□ 0
CACNB3-217ENST00000550483 NPR1P16066 1061 aa15.06■□□□□ 0
CACNB3-217ENST00000550483 NECTIN1Q15223 517 aa15.06■□□□□ 0
CACNB3-217ENST00000550483 TSGA10IPQ3SY00 556 aa15.06■□□□□ 0
CACNB3-217ENST00000550483 IL25Q9H293 177 aa15.06■□□□□ 0
CACNB3-217ENST00000550483 CTNNA3Q9UI47 895 aa15.06■□□□□ 0
CACNB3-217ENST00000550483 MMP10P09238 476 aa15.05■□□□□ -0
CACNB3-217ENST00000550483 ATP2B4P23634 1241 aa15.05■□□□□ -0
CACNB3-217ENST00000550483 ALDH1B1P30837 517 aa15.05■□□□□ -0
CACNB3-217ENST00000550483 RASGRF1Q13972 1273 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms