RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 IFNL2Q8IZJ0 200 aa11.75□□□□□ -0.53
SMARCC2-209ENST00000550164 CARD6Q9BX69 1037 aa11.75□□□□□ -0.53
SMARCC2-209ENST00000550164 FPGT-TNNI3KV9GXZ4 949 aa11.75□□□□□ -0.53
SMARCC2-209ENST00000550164 LRRC8AQ8IWT6 810 aa11.75□□□□□ -0.53
SMARCC2-209ENST00000550164 SRRTQ9BXP5 876 aaKnown RBP11.75□□□□□ -0.53
SMARCC2-209ENST00000550164 XPO4Q9C0E2 1151 aaKnown RBP11.75□□□□□ -0.53
SMARCC2-209ENST00000550164 NCOA3Q9Y6Q9 1424 aa11.75□□□□□ -0.53
SMARCC2-209ENST00000550164 SHROOM2Q13796 1616 aa11.75□□□□□ -0.53
SMARCC2-209ENST00000550164 BABAM1Q9NWV8 329 aa11.75□□□□□ -0.53
SMARCC2-209ENST00000550164 CCDC196A0A1B0GTZ2 297 aa11.75□□□□□ -0.53
SMARCC2-209ENST00000550164 FANCCQ00597 558 aa11.75□□□□□ -0.53
SMARCC2-209ENST00000550164 MYL5Q02045 173 aa11.75□□□□□ -0.53
SMARCC2-209ENST00000550164 PUF60Q9UHX1 559 aaKnown RBP11.75□□□□□ -0.53
SMARCC2-209ENST00000550164 ABCA6Q8N139 1617 aa11.75□□□□□ -0.53
SMARCC2-209ENST00000550164 SPHKAPQ2M3C7 1700 aa11.75□□□□□ -0.53
SMARCC2-209ENST00000550164 RNF113AO15541 343 aaKnown RBP11.74□□□□□ -0.53
SMARCC2-209ENST00000550164 IL15P40933 162 aaPredicted RBP11.74□□□□□ -0.53
SMARCC2-209ENST00000550164 CENPHQ9H3R5 247 aa11.74□□□□□ -0.53
SMARCC2-209ENST00000550164 N4BP3O15049 544 aa11.74□□□□□ -0.53
SMARCC2-209ENST00000550164 HOXB7P09629 217 aa11.74□□□□□ -0.53
SMARCC2-209ENST00000550164 STX17P56962 302 aa11.74□□□□□ -0.53
SMARCC2-209ENST00000550164 NBPF6Q5VWK0 638 aa11.74□□□□□ -0.53
SMARCC2-209ENST00000550164 TXLNBQ8N3L3 684 aa11.74□□□□□ -0.53
SMARCC2-209ENST00000550164 MAP4K1Q92918 833 aa11.74□□□□□ -0.53
SMARCC2-209ENST00000550164 NBPF4Q96M43 638 aa11.74□□□□□ -0.53
SMARCC2-209ENST00000550164 LLPHQ9BRT6 129 aaKnown RBP11.74□□□□□ -0.53
SMARCC2-209ENST00000550164 IQSEC2Q5JU85 1478 aa11.74□□□□□ -0.53
SMARCC2-209ENST00000550164 ARHGEF10O15013 1369 aa11.74□□□□□ -0.53
SMARCC2-209ENST00000550164 PLEKHG3A1L390 1219 aa11.74□□□□□ -0.53
SMARCC2-209ENST00000550164 PHACTR2O75167 634 aa11.74□□□□□ -0.53
SMARCC2-209ENST00000550164 CHRNA2Q15822 529 aa11.74□□□□□ -0.53
SMARCC2-209ENST00000550164 ATL3Q6DD88 541 aa11.74□□□□□ -0.53
SMARCC2-209ENST00000550164 PI4K2BQ8TCG2 481 aa11.74□□□□□ -0.53
SMARCC2-209ENST00000550164 ZNF202O95125 648 aa11.73□□□□□ -0.53
SMARCC2-209ENST00000550164 TUBB4AP04350 444 aa11.73□□□□□ -0.53
SMARCC2-209ENST00000550164 EPS15P42566 896 aa11.73□□□□□ -0.53
SMARCC2-209ENST00000550164 IP6K1Q92551 441 aa11.73□□□□□ -0.53
SMARCC2-209ENST00000550164 RANBP6O60518 1105 aaKnown RBP11.73□□□□□ -0.53
SMARCC2-209ENST00000550164 MAP3K12Q12852 859 aa11.73□□□□□ -0.53
SMARCC2-209ENST00000550164 SLC9C2Q5TAH2 1124 aa11.73□□□□□ -0.53
SMARCC2-209ENST00000550164 BRAPQ7Z569 592 aa11.73□□□□□ -0.53
SMARCC2-209ENST00000550164 CEP89Q96ST8 783 aa11.73□□□□□ -0.53
SMARCC2-209ENST00000550164 FTOQ9C0B1 505 aaKnown RBP eCLIP11.73□□□□□ -0.53
SMARCC2-209ENST00000550164 TANGO6Q9C0B7 1094 aa11.73□□□□□ -0.53
SMARCC2-209ENST00000550164 TLR7Q9NYK1 1049 aaKnown RBP11.73□□□□□ -0.53
SMARCC2-209ENST00000550164 NAA16Q6N069 864 aaPredicted RBP11.73□□□□□ -0.53
SMARCC2-209ENST00000550164 TMEM87AQ8NBN3 555 aa11.73□□□□□ -0.53
SMARCC2-209ENST00000550164 TDRD7Q8NHU6 1098 aaKnown RBP11.73□□□□□ -0.53
SMARCC2-209ENST00000550164 LRRC7Q96NW7 1537 aa11.72□□□□□ -0.53
SMARCC2-209ENST00000550164 ZFYP08048 801 aaPredicted RBP11.72□□□□□ -0.53
SMARCC2-209ENST00000550164 ANO1Q5XXA6 986 aa11.72□□□□□ -0.53
SMARCC2-209ENST00000550164 GOLGA1Q92805 767 aa11.72□□□□□ -0.53
SMARCC2-209ENST00000550164 CDK5RAP3Q96JB5 506 aa11.72□□□□□ -0.53
SMARCC2-209ENST00000550164 BAG1Q99933 345 aaPredicted RBP11.72□□□□□ -0.53
SMARCC2-209ENST00000550164 CCDC175P0C221 793 aa11.72□□□□□ -0.53
SMARCC2-209ENST00000550164 ATP2B3Q16720 1220 aa11.72□□□□□ -0.53
SMARCC2-209ENST00000550164 KBTBD3Q8NAB2 608 aa11.72□□□□□ -0.53
SMARCC2-209ENST00000550164 METP08581 1390 aa11.72□□□□□ -0.53
SMARCC2-209ENST00000550164 PNPLA6Q8IY17 1366 aa11.72□□□□□ -0.53
SMARCC2-209ENST00000550164 EFCAB6Q5THR3 1501 aa11.72□□□□□ -0.53
SMARCC2-209ENST00000550164 MED14O60244 1454 aa11.72□□□□□ -0.53
SMARCC2-209ENST00000550164 AK9Q5TCS8 1911 aa11.72□□□□□ -0.53
SMARCC2-209ENST00000550164 KIAA0754O94854 1291 aa11.72□□□□□ -0.53
SMARCC2-209ENST00000550164 YEATS4O95619 227 aa11.72□□□□□ -0.53
SMARCC2-209ENST00000550164 NAA30Q147X3 362 aaPredicted RBP11.72□□□□□ -0.53
SMARCC2-209ENST00000550164 C11orf57Q6ZUT1 292 aaPredicted RBP11.72□□□□□ -0.53
SMARCC2-209ENST00000550164 SMARCC1Q92922 1105 aaPredicted RBP11.72□□□□□ -0.53
SMARCC2-209ENST00000550164 RHOXF2BP0C7M4 288 aa11.71□□□□□ -0.53
SMARCC2-209ENST00000550164 CAPN2P17655 700 aa11.71□□□□□ -0.53
SMARCC2-209ENST00000550164 DNA2P51530 1060 aa11.71□□□□□ -0.53
SMARCC2-209ENST00000550164 MAP9Q49MG5 647 aa11.71□□□□□ -0.53
SMARCC2-209ENST00000550164 SPECC1Q5M775 1068 aa11.71□□□□□ -0.53
SMARCC2-209ENST00000550164 ZNF589Q86UQ0 364 aaPredicted RBP11.71□□□□□ -0.53
SMARCC2-209ENST00000550164 MRFAP1L1Q96HT8 127 aa11.71□□□□□ -0.53
SMARCC2-209ENST00000550164 RHOXF2Q9BQY4 288 aa11.71□□□□□ -0.53
SMARCC2-209ENST00000550164 ELP1O95163 1332 aa11.71□□□□□ -0.53
SMARCC2-209ENST00000550164 KCNA6P17658 529 aa11.71□□□□□ -0.53
SMARCC2-209ENST00000550164 GCKRQ14397 625 aa11.71□□□□□ -0.53
SMARCC2-209ENST00000550164 MFSD6Q6ZSS7 791 aa11.71□□□□□ -0.53
SMARCC2-209ENST00000550164 KRT28Q7Z3Y7 464 aa11.71□□□□□ -0.53
SMARCC2-209ENST00000550164 CCDC191Q8NCU4 936 aa11.71□□□□□ -0.53
SMARCC2-209ENST00000550164 DHX58Q96C10 678 aa11.71□□□□□ -0.53
SMARCC2-209ENST00000550164 GNL3LQ9NVN8 582 aaKnown RBP11.71□□□□□ -0.53
SMARCC2-209ENST00000550164 TRMT112Q9UI30 125 aaKnown RBP11.71□□□□□ -0.53
SMARCC2-209ENST00000550164 ARID5BQ14865 1188 aa11.71□□□□□ -0.54
SMARCC2-209ENST00000550164 PROSER3Q2NL68 480 aa11.71□□□□□ -0.54
SMARCC2-209ENST00000550164 VPS18Q9P253 973 aa11.71□□□□□ -0.54
SMARCC2-209ENST00000550164 KIAA1468Q9P260 1216 aa11.71□□□□□ -0.54
SMARCC2-209ENST00000550164 PRR36Q9H6K5 1346 aa11.71□□□□□ -0.54
SMARCC2-209ENST00000550164 POTEB2H3BUK9 544 aa11.71□□□□□ -0.54
SMARCC2-209ENST00000550164 GCP02774 474 aa11.71□□□□□ -0.54
SMARCC2-209ENST00000550164 KANK3Q6NY19 840 aa11.71□□□□□ -0.54
SMARCC2-209ENST00000550164 IMPACTQ9P2X3 320 aa11.71□□□□□ -0.54
SMARCC2-209ENST00000550164 ATP7BP35670 1465 aa11.71□□□□□ -0.54
SMARCC2-209ENST00000550164 ERCC6L2Q5T890 1561 aa11.71□□□□□ -0.54
SMARCC2-209ENST00000550164 CDK12Q9NYV4 1490 aaPredicted RBP11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 ANKRD18BA2A2Z9 1011 aa11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 CTAGE15A4D2H0 777 aa11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 TAF5LO75529 589 aa11.7□□□□□ -0.54
SMARCC2-209ENST00000550164 CTAGE8P0CG41 777 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms