RNA–Protein interactions for RNA: ENST00000550089.1

AL133304.3-201, humanhuman

TSL 3 BASIC

Gene AL133304.3, Length 477 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL133304.3-201ENST00000550089 USP17L3A6NCW0 530 aa11.92□□□□□ -0.5
AL133304.3-201ENST00000550089 USP17L4A6NCW7 530 aa11.92□□□□□ -0.5
AL133304.3-201ENST00000550089 U2SURPO15042 1029 aaKnown RBP11.92□□□□□ -0.5
AL133304.3-201ENST00000550089 GNRH1P01148 92 aa11.92□□□□□ -0.5
AL133304.3-201ENST00000550089 GJA5P36382 358 aa11.92□□□□□ -0.5
AL133304.3-201ENST00000550089 USP17L1Q7RTZ2 530 aa11.92□□□□□ -0.5
AL133304.3-201ENST00000550089 NLRP10Q86W26 655 aa11.92□□□□□ -0.5
AL133304.3-201ENST00000550089 TRMT112Q9UI30 125 aaKnown RBP11.92□□□□□ -0.5
AL133304.3-201ENST00000550089 ZNF646O15015 1829 aaPredicted RBP11.92□□□□□ -0.5
AL133304.3-201ENST00000550089 LAMB1P07942 1786 aa11.92□□□□□ -0.5
AL133304.3-201ENST00000550089 PLA2G5P39877 138 aa11.91□□□□□ -0.5
AL133304.3-201ENST00000550089 PRMT2P55345 433 aa11.91□□□□□ -0.5
AL133304.3-201ENST00000550089 SF3B3Q15393 1217 aaKnown RBP11.91□□□□□ -0.5
AL133304.3-201ENST00000550089 AMER1Q5JTC6 1135 aaPredicted RBP11.91□□□□□ -0.5
AL133304.3-201ENST00000550089 OGFOD1Q8N543 542 aa11.91□□□□□ -0.5
AL133304.3-201ENST00000550089 ZFYVE28Q9HCC9 887 aa11.91□□□□□ -0.5
AL133304.3-201ENST00000550089 MIS18AQ9NYP9 233 aa11.91□□□□□ -0.5
AL133304.3-201ENST00000550089 PPP1R12BO60237 982 aaPredicted RBP11.9□□□□□ -0.5
AL133304.3-201ENST00000550089 FARP2O94887 1054 aaPredicted RBP11.9□□□□□ -0.5
AL133304.3-201ENST00000550089 BCAMP50895 628 aa11.9□□□□□ -0.5
AL133304.3-201ENST00000550089 RPS8P62241 208 aaKnown RBP11.9□□□□□ -0.5
AL133304.3-201ENST00000550089 DCTN1Q14203 1278 aa11.9□□□□□ -0.5
AL133304.3-201ENST00000550089 PODNQ7Z5L7 613 aa11.9□□□□□ -0.5
AL133304.3-201ENST00000550089 APOBEC3FQ8IUX4 373 aaKnown RBP11.9□□□□□ -0.5
AL133304.3-201ENST00000550089 ARHGAP39Q9C0H5 1083 aa11.9□□□□□ -0.5
AL133304.3-201ENST00000550089 RPTORQ8N122 1335 aa11.89□□□□□ -0.51
AL133304.3-201ENST00000550089 UFL1O94874 794 aa11.89□□□□□ -0.51
AL133304.3-201ENST00000550089 MMP14P50281 582 aa11.89□□□□□ -0.51
AL133304.3-201ENST00000550089 KIF22Q14807 665 aa11.89□□□□□ -0.51
AL133304.3-201ENST00000550089 TAF1CQ15572 869 aaPredicted RBP11.89□□□□□ -0.51
AL133304.3-201ENST00000550089 LRP10Q7Z4F1 713 aa11.89□□□□□ -0.51
AL133304.3-201ENST00000550089 MS4A4AQ96JQ5 239 aa11.89□□□□□ -0.51
AL133304.3-201ENST00000550089 DEFB129Q9H1M3 183 aa11.89□□□□□ -0.51
AL133304.3-201ENST00000550089 RAPGEFL1Q9UHV5 662 aa11.89□□□□□ -0.51
AL133304.3-201ENST00000550089 LAMB4A4D0S4 1761 aa11.89□□□□□ -0.51
AL133304.3-201ENST00000550089 PSME4Q14997 1843 aa11.88□□□□□ -0.51
AL133304.3-201ENST00000550089 HTATSF1O43719 755 aaKnown RBP11.88□□□□□ -0.51
AL133304.3-201ENST00000550089 CCL5P13501 91 aa11.88□□□□□ -0.51
AL133304.3-201ENST00000550089 PRKAR2BP31323 418 aa11.88□□□□□ -0.51
AL133304.3-201ENST00000550089 LACTBP83111 547 aaPredicted RBP11.88□□□□□ -0.51
AL133304.3-201ENST00000550089 HSP90AB3PQ58FF7 597 aa11.88□□□□□ -0.51
AL133304.3-201ENST00000550089 RNF208Q9H0X6 261 aa11.88□□□□□ -0.51
AL133304.3-201ENST00000550089 ANKIB1Q9P2G1 1089 aa11.88□□□□□ -0.51
AL133304.3-201ENST00000550089 GGA1Q9UJY5 639 aa11.88□□□□□ -0.51
AL133304.3-201ENST00000550089 SASH1O94885 1247 aa11.87□□□□□ -0.51
AL133304.3-201ENST00000550089 HSPA5P11021 654 aaKnown RBP11.87□□□□□ -0.51
AL133304.3-201ENST00000550089 HOXD11P31277 338 aaPredicted RBP11.87□□□□□ -0.51
AL133304.3-201ENST00000550089 GRK4P32298 578 aa11.87□□□□□ -0.51
AL133304.3-201ENST00000550089 EIF4A1P60842 406 aaKnown RBP11.87□□□□□ -0.51
AL133304.3-201ENST00000550089 DACT2Q5SW24 774 aa11.87□□□□□ -0.51
AL133304.3-201ENST00000550089 U2AF1L4Q8WU68 220 aaKnown RBP11.87□□□□□ -0.51
AL133304.3-201ENST00000550089 FAM122AQ96E09 287 aa11.87□□□□□ -0.51
AL133304.3-201ENST00000550089 GUCD1Q96NT3 240 aa11.87□□□□□ -0.51
AL133304.3-201ENST00000550089 THUMPD2Q9BTF0 503 aaKnown RBP11.87□□□□□ -0.51
AL133304.3-201ENST00000550089 POTEB2H3BUK9 544 aa11.86□□□□□ -0.51
AL133304.3-201ENST00000550089 TLR2O60603 784 aa11.86□□□□□ -0.51
AL133304.3-201ENST00000550089 USP2O75604 605 aaPredicted RBP11.86□□□□□ -0.51
AL133304.3-201ENST00000550089 SGPL1O95470 568 aa11.86□□□□□ -0.51
AL133304.3-201ENST00000550089 EIF4G2P78344 907 aaKnown RBP eCLIP11.86□□□□□ -0.51
AL133304.3-201ENST00000550089 PDIA6Q15084 440 aa11.86□□□□□ -0.51
AL133304.3-201ENST00000550089 ANKRD13AQ8IZ07 590 aa11.86□□□□□ -0.51
AL133304.3-201ENST00000550089 TDHQ8IZJ6 230 aa11.86□□□□□ -0.51
AL133304.3-201ENST00000550089 PNISRQ8TF01 805 aaKnown RBP11.86□□□□□ -0.51
AL133304.3-201ENST00000550089 BRI3BPQ8WY22 251 aa11.86□□□□□ -0.51
AL133304.3-201ENST00000550089 SYMPKQ92797 1274 aaKnown RBP11.86□□□□□ -0.51
AL133304.3-201ENST00000550089 ZBED3Q96IU2 234 aaPredicted RBP11.86□□□□□ -0.51
AL133304.3-201ENST00000550089 MXD3Q9BW11 206 aa11.86□□□□□ -0.51
AL133304.3-201ENST00000550089 RSPH6AQ9H0K4 717 aa11.86□□□□□ -0.51
AL133304.3-201ENST00000550089 COL1A1P02452 1464 aaPredicted RBP11.85□□□□□ -0.51
AL133304.3-201ENST00000550089 CAPN2P17655 700 aa11.85□□□□□ -0.51
AL133304.3-201ENST00000550089 IREB2P48200 963 aaKnown RBP11.85□□□□□ -0.51
AL133304.3-201ENST00000550089 SUPT20HL1Q3ZLR7 823 aa11.85□□□□□ -0.51
AL133304.3-201ENST00000550089 FAM109BQ6ICB4 259 aaPredicted RBP11.85□□□□□ -0.51
AL133304.3-201ENST00000550089 FAM43AQ8N2R8 423 aa11.85□□□□□ -0.51
AL133304.3-201ENST00000550089 OPTNQ96CV9 577 aa11.85□□□□□ -0.51
AL133304.3-201ENST00000550089 TRIM47Q96LD4 638 aa11.85□□□□□ -0.51
AL133304.3-201ENST00000550089 SRRDQ9UH36 339 aa11.85□□□□□ -0.51
AL133304.3-201ENST00000550089 RIPOR2Q9Y4F9 1068 aa11.85□□□□□ -0.51
AL133304.3-201ENST00000550089 PPP2R3BQ9Y5P8 575 aa11.85□□□□□ -0.51
AL133304.3-201ENST00000550089 MYO3BQ8WXR4 1341 aa11.85□□□□□ -0.51
AL133304.3-201ENST00000550089 COL4A1P02462 1669 aa11.84□□□□□ -0.51
AL133304.3-201ENST00000550089 SSC5DA1L4H1 1573 aa11.84□□□□□ -0.51
AL133304.3-201ENST00000550089 WDHD1O75717 1129 aaPredicted RBP11.84□□□□□ -0.51
AL133304.3-201ENST00000550089 STRIP1Q5VSL9 837 aa11.84□□□□□ -0.51
AL133304.3-201ENST00000550089 COL3A1P02461 1466 aaPredicted RBP11.83□□□□□ -0.52
AL133304.3-201ENST00000550089 CCL15-CCL14A0A0B4J2E2 113 aa11.83□□□□□ -0.52
AL133304.3-201ENST00000550089 HOXD10P28358 340 aa11.83□□□□□ -0.52
AL133304.3-201ENST00000550089 GTF2A2P52657 109 aa11.83□□□□□ -0.52
AL133304.3-201ENST00000550089 UBXN2AP68543 259 aa11.83□□□□□ -0.52
AL133304.3-201ENST00000550089 CCL15Q16663 113 aa11.83□□□□□ -0.52
AL133304.3-201ENST00000550089 HELBQ8NG08 1087 aaPredicted RBP11.83□□□□□ -0.52
AL133304.3-201ENST00000550089 RAET1EQ8TD07 263 aa11.83□□□□□ -0.52
AL133304.3-201ENST00000550089 FAM89AQ96GI7 184 aa11.83□□□□□ -0.52
AL133304.3-201ENST00000550089 TIMELESSQ9UNS1 1208 aa11.83□□□□□ -0.52
AL133304.3-201ENST00000550089 PRUNE2Q8WUY3 3088 aa11.83□□□□□ -0.52
AL133304.3-201ENST00000550089 MUC3AQ02505 3323 aa11.83□□□□□ -0.52
AL133304.3-201ENST00000550089 ZSWIM8A7E2V4 1837 aa11.82□□□□□ -0.52
AL133304.3-201ENST00000550089 CTGFP29279 349 aa11.82□□□□□ -0.52
AL133304.3-201ENST00000550089 PROSER3Q2NL68 480 aa11.82□□□□□ -0.52
AL133304.3-201ENST00000550089 NBPF12Q5TAG4 269 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms