RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 CEP44Q9C0F1 390 aa13.24□□□□□ -0.29
PRIM1-204ENST00000549549 PCDHGC4Q9Y5F7 938 aa13.24□□□□□ -0.29
PRIM1-204ENST00000549549 ITPKAP23677 461 aa13.23□□□□□ -0.29
PRIM1-204ENST00000549549 LIG3P49916 1009 aa13.23□□□□□ -0.29
PRIM1-204ENST00000549549 UBAP2LQ14157 1087 aaKnown RBP13.23□□□□□ -0.29
PRIM1-204ENST00000549549 COL13A1Q5TAT6 717 aaPredicted RBP13.23□□□□□ -0.29
PRIM1-204ENST00000549549 TRIM46Q7Z4K8 759 aa13.23□□□□□ -0.29
PRIM1-204ENST00000549549 JAZF1Q86VZ6 243 aa13.23□□□□□ -0.29
PRIM1-204ENST00000549549 CEP120Q8N960 986 aa13.23□□□□□ -0.29
PRIM1-204ENST00000549549 OSMRQ99650 979 aa13.23□□□□□ -0.29
PRIM1-204ENST00000549549 SUPT16HQ9Y5B9 1047 aaKnown RBP13.23□□□□□ -0.29
PRIM1-204ENST00000549549 SENP3-EIF4A1A0A087X0R7 540 aa13.22□□□□□ -0.29
PRIM1-204ENST00000549549 K7ELQ4 463 aaPredicted RBP13.22□□□□□ -0.29
PRIM1-204ENST00000549549 FBXO24O75426 580 aa13.22□□□□□ -0.29
PRIM1-204ENST00000549549 ETFBP38117 255 aa13.22□□□□□ -0.29
PRIM1-204ENST00000549549 LMNB2Q03252 620 aa13.22□□□□□ -0.29
PRIM1-204ENST00000549549 TNP2Q05952 138 aa13.22□□□□□ -0.29
PRIM1-204ENST00000549549 HYAL2Q12891 473 aa13.22□□□□□ -0.29
PRIM1-204ENST00000549549 MRFAP1L1Q96HT8 127 aa13.22□□□□□ -0.29
PRIM1-204ENST00000549549 KLF4O43474 513 aa13.21□□□□□ -0.29
PRIM1-204ENST00000549549 PSAPP07602 524 aa13.21□□□□□ -0.29
PRIM1-204ENST00000549549 GRIA4P48058 902 aa13.21□□□□□ -0.29
PRIM1-204ENST00000549549 MAP3K11Q16584 847 aa13.21□□□□□ -0.29
PRIM1-204ENST00000549549 NCAPG2Q86XI2 1143 aa13.21□□□□□ -0.29
PRIM1-204ENST00000549549 DZANK1Q9NVP4 752 aa13.21□□□□□ -0.29
PRIM1-204ENST00000549549 SIRPGQ9P1W8 387 aa13.21□□□□□ -0.29
PRIM1-204ENST00000549549 DNMT3LQ9UJW3 386 aa13.21□□□□□ -0.29
PRIM1-204ENST00000549549 PF4P02776 101 aa13.2□□□□□ -0.3
PRIM1-204ENST00000549549 MMRN1Q13201 1228 aa13.2□□□□□ -0.3
PRIM1-204ENST00000549549 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.2□□□□□ -0.3
PRIM1-204ENST00000549549 TPTE2Q6XPS3 522 aa13.2□□□□□ -0.3
PRIM1-204ENST00000549549 BHLHE41Q9C0J9 482 aaPredicted RBP13.2□□□□□ -0.3
PRIM1-204ENST00000549549 STRN4Q9NRL3 753 aa13.2□□□□□ -0.3
PRIM1-204ENST00000549549 TLR6Q9Y2C9 796 aa13.2□□□□□ -0.3
PRIM1-204ENST00000549549 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.2□□□□□ -0.3
PRIM1-204ENST00000549549 NFKBIEO00221 500 aa13.19□□□□□ -0.3
PRIM1-204ENST00000549549 CELA3AP09093 270 aa13.19□□□□□ -0.3
PRIM1-204ENST00000549549 BMP1P13497 986 aa13.19□□□□□ -0.3
PRIM1-204ENST00000549549 ACPPP15309 386 aa13.19□□□□□ -0.3
PRIM1-204ENST00000549549 CAMK2GQ13555 558 aaPredicted RBP13.19□□□□□ -0.3
PRIM1-204ENST00000549549 AGMOQ6ZNB7 445 aa13.19□□□□□ -0.3
PRIM1-204ENST00000549549 ANKS3Q6ZW76 656 aa13.19□□□□□ -0.3
PRIM1-204ENST00000549549 NECAB3Q96P71 396 aaPredicted RBP13.19□□□□□ -0.3
PRIM1-204ENST00000549549 HCN2Q9UL51 889 aa13.19□□□□□ -0.3
PRIM1-204ENST00000549549 ENC1O14682 589 aa13.18□□□□□ -0.3
PRIM1-204ENST00000549549 KHNYNO15037 678 aaKnown RBP13.18□□□□□ -0.3
PRIM1-204ENST00000549549 MAPTP10636 758 aaKnown RBP13.18□□□□□ -0.3
PRIM1-204ENST00000549549 NFKB1P19838 968 aa13.18□□□□□ -0.3
PRIM1-204ENST00000549549 SMCPP49901 116 aaPredicted RBP13.18□□□□□ -0.3
PRIM1-204ENST00000549549 RPS26P62854 115 aaKnown RBP13.18□□□□□ -0.3
PRIM1-204ENST00000549549 PLAURQ03405 335 aa13.18□□□□□ -0.3
PRIM1-204ENST00000549549 TCEAL1Q15170 157 aa13.18□□□□□ -0.3
PRIM1-204ENST00000549549 RPS26P11Q5JNZ5 115 aaPredicted RBP13.18□□□□□ -0.3
PRIM1-204ENST00000549549 ZFP42Q96MM3 310 aa13.18□□□□□ -0.3
PRIM1-204ENST00000549549 PNMA5Q96PV4 448 aa13.18□□□□□ -0.3
PRIM1-204ENST00000549549 NDFIP2Q9NV92 336 aa13.18□□□□□ -0.3
PRIM1-204ENST00000549549 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.18□□□□□ -0.3
PRIM1-204ENST00000549549 FAM160A1Q05DH4 1040 aa13.17□□□□□ -0.3
PRIM1-204ENST00000549549 PCNX4Q63HM2 1172 aa13.17□□□□□ -0.3
PRIM1-204ENST00000549549 SLITRK4Q8IW52 837 aa13.17□□□□□ -0.3
PRIM1-204ENST00000549549 TMEM102Q8N9M5 508 aaPredicted RBP13.17□□□□□ -0.3
PRIM1-204ENST00000549549 NXPE3Q969Y0 559 aa13.17□□□□□ -0.3
PRIM1-204ENST00000549549 SPACA7Q96KW9 195 aa13.17□□□□□ -0.3
PRIM1-204ENST00000549549 UBP1Q9NZI7 540 aa13.17□□□□□ -0.3
PRIM1-204ENST00000549549 HSD3B2P26439 372 aa13.16□□□□□ -0.3
PRIM1-204ENST00000549549 RAB33AQ14088 237 aa13.16□□□□□ -0.3
PRIM1-204ENST00000549549 GRIN2CQ14957 1233 aa13.16□□□□□ -0.3
PRIM1-204ENST00000549549 SPRED3Q2MJR0 410 aa13.16□□□□□ -0.3
PRIM1-204ENST00000549549 GOLM1Q8NBJ4 401 aa13.16□□□□□ -0.3
PRIM1-204ENST00000549549 SEC31BQ9NQW1 1179 aa13.16□□□□□ -0.3
PRIM1-204ENST00000549549 MARK1Q9P0L2 795 aa13.16□□□□□ -0.3
PRIM1-204ENST00000549549 MRVI1Q9Y6F6 885 aa13.16□□□□□ -0.3
PRIM1-204ENST00000549549 ROBO2Q9HCK4 1378 aa13.16□□□□□ -0.3
PRIM1-204ENST00000549549 DCDC2BA2VCK2 349 aa13.15□□□□□ -0.3
PRIM1-204ENST00000549549 TFE3P19532 575 aaPredicted RBP13.15□□□□□ -0.3
PRIM1-204ENST00000549549 NRLP54845 237 aa13.15□□□□□ -0.3
PRIM1-204ENST00000549549 SPEM2Q0P670 501 aa13.15□□□□□ -0.3
PRIM1-204ENST00000549549 TTBK2Q6IQ55 1244 aa13.15□□□□□ -0.3
PRIM1-204ENST00000549549 FAM196AQ6ZSG2 479 aa13.15□□□□□ -0.3
PRIM1-204ENST00000549549 PRKAG3Q9UGI9 489 aa13.15□□□□□ -0.3
PRIM1-204ENST00000549549 MRPL42Q9Y6G3 142 aaKnown RBP13.15□□□□□ -0.3
PRIM1-204ENST00000549549 A0A096LPE4 126 aa13.14□□□□□ -0.31
PRIM1-204ENST00000549549 A0A1W2PPZ6 126 aa13.14□□□□□ -0.31
PRIM1-204ENST00000549549 TRPA1O75762 1119 aa13.14□□□□□ -0.31
PRIM1-204ENST00000549549 CRKP46108 304 aa13.14□□□□□ -0.31
PRIM1-204ENST00000549549 APOBRQ0VD83 1088 aa13.14□□□□□ -0.31
PRIM1-204ENST00000549549 SNAP47Q5SQN1 464 aa13.14□□□□□ -0.31
PRIM1-204ENST00000549549 DHX32Q7L7V1 743 aaKnown RBP13.14□□□□□ -0.31
PRIM1-204ENST00000549549 LRP10Q7Z4F1 713 aa13.14□□□□□ -0.31
PRIM1-204ENST00000549549 CCDC84Q86UT8 332 aaPredicted RBP13.14□□□□□ -0.31
PRIM1-204ENST00000549549 NKD1Q969G9 470 aa13.14□□□□□ -0.31
PRIM1-204ENST00000549549 SLC30A3Q99726 388 aa13.13□□□□□ -0.31
PRIM1-204ENST00000549549 LRRC3Q9BY71 257 aa13.13□□□□□ -0.31
PRIM1-204ENST00000549549 NUCKS1Q9H1E3 243 aaKnown RBP13.13□□□□□ -0.31
PRIM1-204ENST00000549549 ZNF576Q9H609 170 aa13.13□□□□□ -0.31
PRIM1-204ENST00000549549 METTL12A8MUP2 240 aa13.12□□□□□ -0.31
PRIM1-204ENST00000549549 BNIP3LO60238 219 aa13.12□□□□□ -0.31
PRIM1-204ENST00000549549 TRIM42Q8IWZ5 723 aa13.12□□□□□ -0.31
PRIM1-204ENST00000549549 CPLX3Q8WVH0 158 aa13.12□□□□□ -0.31
PRIM1-204ENST00000549549 SHDQ96IW2 340 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms