RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 PTPN12Q05209 780 aaKnown RBP6.08□□□□□ -1.44
SCAF11-212ENST00000549162 CDCA7LQ96GN5 454 aa6.08□□□□□ -1.44
SCAF11-212ENST00000549162 HAUS7Q99871 368 aa6.08□□□□□ -1.44
SCAF11-212ENST00000549162 CFHR5Q9BXR6 569 aa6.08□□□□□ -1.44
SCAF11-212ENST00000549162 IVNS1ABPQ9Y6Y0 642 aa6.08□□□□□ -1.44
SCAF11-212ENST00000549162 LOC102724159A0A0B4J2E5 919 aa6.08□□□□□ -1.44
SCAF11-212ENST00000549162 IGHA2P01877 340 aa6.08□□□□□ -1.44
SCAF11-212ENST00000549162 PWP2Q15269 919 aaKnown RBP6.08□□□□□ -1.44
SCAF11-212ENST00000549162 C8orf34Q49A92 452 aa6.08□□□□□ -1.44
SCAF11-212ENST00000549162 SPDYE5A6NIY4 337 aa6.07□□□□□ -1.44
SCAF11-212ENST00000549162 PATL2C9JE40 543 aaKnown RBP6.07□□□□□ -1.44
SCAF11-212ENST00000549162 HMMRO75330 724 aa6.07□□□□□ -1.44
SCAF11-212ENST00000549162 CABP4P57796 275 aa6.07□□□□□ -1.44
SCAF11-212ENST00000549162 SP8Q8IXZ3 490 aa6.07□□□□□ -1.44
SCAF11-212ENST00000549162 BRIP1Q9BX63 1249 aa6.07□□□□□ -1.44
SCAF11-212ENST00000549162 HELLSQ9NRZ9 838 aa6.07□□□□□ -1.44
SCAF11-212ENST00000549162 KAT6BQ8WYB5 2073 aa6.07□□□□□ -1.44
SCAF11-212ENST00000549162 SOX12O15370 315 aa6.07□□□□□ -1.44
SCAF11-212ENST00000549162 ZFYP08048 801 aaPredicted RBP6.07□□□□□ -1.44
SCAF11-212ENST00000549162 TMEM57Q8N5G2 664 aa6.07□□□□□ -1.44
SCAF11-212ENST00000549162 EHD4Q9H223 541 aa6.07□□□□□ -1.44
SCAF11-212ENST00000549162 TBC1D12O60347 775 aa6.07□□□□□ -1.44
SCAF11-212ENST00000549162 SLC5A1P13866 664 aa6.07□□□□□ -1.44
SCAF11-212ENST00000549162 TTC22Q5TAA0 569 aa6.07□□□□□ -1.44
SCAF11-212ENST00000549162 CWC25Q9NXE8 425 aaPredicted RBP6.07□□□□□ -1.44
SCAF11-212ENST00000549162 FRMPD4Q14CM0 1322 aa6.07□□□□□ -1.44
SCAF11-212ENST00000549162 KIAA1217Q5T5P2 1943 aa6.07□□□□□ -1.44
SCAF11-212ENST00000549162 CRKLP46109 303 aaKnown RBP6.06□□□□□ -1.44
SCAF11-212ENST00000549162 HNRNPUQ00839 825 aaKnown RBP eCLIP6.06□□□□□ -1.44
SCAF11-212ENST00000549162 FOXR2Q6PJQ5 311 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 KIF1BPQ96EK5 621 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 FAM89AQ96GI7 184 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 CALR3Q96L12 384 aaKnown RBP6.06□□□□□ -1.44
SCAF11-212ENST00000549162 DSCC1Q9BVC3 393 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 TSPYL2Q9H2G4 693 aaPredicted RBP6.06□□□□□ -1.44
SCAF11-212ENST00000549162 CTSWP56202 376 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 NKX3-2P78367 333 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 ORC2Q13416 577 aaPredicted RBP6.06□□□□□ -1.44
SCAF11-212ENST00000549162 UBE3CQ15386 1083 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 ANKRD13DQ6ZTN6 518 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 SND1Q7KZF4 910 aaKnown RBP eCLIP6.06□□□□□ -1.44
SCAF11-212ENST00000549162 DHX37Q8IY37 1157 aaKnown RBP6.06□□□□□ -1.44
SCAF11-212ENST00000549162 SEPT12Q8IYM1 358 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 ANKRD2Q9GZV1 360 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 PCDHB15Q9Y5E8 787 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 PFASO15067 1338 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.06□□□□□ -1.44
SCAF11-212ENST00000549162 POM121CA8CG34 1229 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 PPP1R15BQ5SWA1 713 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 PLEKHM2Q8IWE5 1019 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 ZNFX1Q9P2E3 1918 aaKnown RBP6.06□□□□□ -1.44
SCAF11-212ENST00000549162 BBOX1O75936 387 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 GYS1P13807 737 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 CUL4AQ13619 759 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 SKIV2LQ15477 1246 aaKnown RBP6.06□□□□□ -1.44
SCAF11-212ENST00000549162 GLMNQ92990 594 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 BACH2Q9BYV9 841 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 PPP2R3BQ9Y5P8 575 aa6.06□□□□□ -1.44
SCAF11-212ENST00000549162 PRR29P0C7W0 189 aa6.05□□□□□ -1.44
SCAF11-212ENST00000549162 PPP2R5BQ15173 497 aa6.05□□□□□ -1.44
SCAF11-212ENST00000549162 PPP1R42Q7Z4L9 355 aa6.05□□□□□ -1.44
SCAF11-212ENST00000549162 LTBP2Q14767 1821 aa6.05□□□□□ -1.44
SCAF11-212ENST00000549162 TTLL11Q8NHH1 800 aa6.05□□□□□ -1.44
SCAF11-212ENST00000549162 GDPD2Q9HCC8 539 aa6.05□□□□□ -1.44
SCAF11-212ENST00000549162 POLR3EQ9NVU0 708 aa6.05□□□□□ -1.44
SCAF11-212ENST00000549162 TANC1Q9C0D5 1861 aa6.05□□□□□ -1.44
SCAF11-212ENST00000549162 STK36Q9NRP7 1315 aa6.05□□□□□ -1.44
SCAF11-212ENST00000549162 ZNF280AP59817 542 aaPredicted RBP6.05□□□□□ -1.44
SCAF11-212ENST00000549162 TEFQ10587 303 aa6.05□□□□□ -1.44
SCAF11-212ENST00000549162 HDGFL1Q5TGJ6 251 aa6.05□□□□□ -1.44
SCAF11-212ENST00000549162 TOM1L2Q6ZVM7 507 aa6.05□□□□□ -1.44
SCAF11-212ENST00000549162 L3MBTL3Q96JM7 780 aaPredicted RBP6.05□□□□□ -1.44
SCAF11-212ENST00000549162 ZCCHC17Q9NP64 241 aaKnown RBP6.05□□□□□ -1.44
SCAF11-212ENST00000549162 HMG20BQ9P0W2 317 aa6.05□□□□□ -1.44
SCAF11-212ENST00000549162 CHPF2Q9P2E5 772 aa6.05□□□□□ -1.44
SCAF11-212ENST00000549162 IGKV6D-41A0A0C4DH26 115 aa6.04□□□□□ -1.44
SCAF11-212ENST00000549162 GRXCR2A6NFK2 248 aa6.04□□□□□ -1.44
SCAF11-212ENST00000549162 CYP2E1P05181 493 aaPredicted RBP6.04□□□□□ -1.44
SCAF11-212ENST00000549162 MAP3K11Q16584 847 aa6.04□□□□□ -1.44
SCAF11-212ENST00000549162 CHD1LQ86WJ1 897 aa6.04□□□□□ -1.44
SCAF11-212ENST00000549162 INTS4Q96HW7 963 aaKnown RBP6.04□□□□□ -1.44
SCAF11-212ENST00000549162 GMLQ99445 158 aa6.04□□□□□ -1.44
SCAF11-212ENST00000549162 STK31Q9BXU1 1019 aa6.04□□□□□ -1.44
SCAF11-212ENST00000549162 CLEC11AQ9Y240 323 aa6.04□□□□□ -1.44
SCAF11-212ENST00000549162 AKAP2Q9Y2D5 859 aa6.04□□□□□ -1.44
SCAF11-212ENST00000549162 FAM237AA0A1B0GTK4 181 aa6.04□□□□□ -1.44
SCAF11-212ENST00000549162 UQCRFS1P1P0C7P4 283 aa6.04□□□□□ -1.44
SCAF11-212ENST00000549162 KCNA3P22001 575 aa6.04□□□□□ -1.44
SCAF11-212ENST00000549162 RXRBP28702 533 aa6.04□□□□□ -1.44
SCAF11-212ENST00000549162 PDE4CQ08493 712 aa6.04□□□□□ -1.44
SCAF11-212ENST00000549162 MCM10Q7L590 875 aa6.04□□□□□ -1.44
SCAF11-212ENST00000549162 NLGN1Q8N2Q7 840 aa6.04□□□□□ -1.44
SCAF11-212ENST00000549162 TMEM87AQ8NBN3 555 aa6.04□□□□□ -1.44
SCAF11-212ENST00000549162 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.04□□□□□ -1.44
SCAF11-212ENST00000549162 C1QBPQ07021 282 aaKnown RBP6.04□□□□□ -1.44
SCAF11-212ENST00000549162 HIC1Q14526 733 aa6.04□□□□□ -1.44
SCAF11-212ENST00000549162 NOM1Q5C9Z4 860 aaKnown RBP6.04□□□□□ -1.44
SCAF11-212ENST00000549162 NFATC2IPQ8NCF5 419 aa6.04□□□□□ -1.44
SCAF11-212ENST00000549162 TDRD7Q8NHU6 1098 aaKnown RBP6.04□□□□□ -1.44
SCAF11-212ENST00000549162 CHMP4CQ96CF2 233 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms