RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	EDEM1	Q92611	657 aa		7.82	□□□□□ -1.16
RPAP3-205	ENST00000548211	MTMR3	Q13615	1198 aa		7.81	□□□□□ -1.16
RPAP3-205	ENST00000548211	PDE12	Q6L8Q7	609 aa	Known RBP	7.81	□□□□□ -1.16
RPAP3-205	ENST00000548211	KIAA1211	Q6ZU35	1233 aa		7.81	□□□□□ -1.16
RPAP3-205	ENST00000548211	ARMC10	Q8N2F6	343 aa		7.81	□□□□□ -1.16
RPAP3-205	ENST00000548211	KLHDC7B	Q96G42	594 aa		7.81	□□□□□ -1.16
RPAP3-205	ENST00000548211	HHIP	Q96QV1	700 aa		7.81	□□□□□ -1.16
RPAP3-205	ENST00000548211	SALL4	Q9UJQ4	1053 aa		7.81	□□□□□ -1.16
RPAP3-205	ENST00000548211	SERPINA10	Q9UK55	444 aa		7.81	□□□□□ -1.16
RPAP3-205	ENST00000548211	NFKBIE	O00221	500 aa		7.8	□□□□□ -1.16
RPAP3-205	ENST00000548211	HELQ	Q8TDG4	1101 aa		7.8	□□□□□ -1.16
RPAP3-205	ENST00000548211	UBASH3B	Q8TF42	649 aa		7.8	□□□□□ -1.16
RPAP3-205	ENST00000548211	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.8	□□□□□ -1.16
RPAP3-205	ENST00000548211	CARNS1	A5YM72	827 aa		7.79	□□□□□ -1.16
RPAP3-205	ENST00000548211	PDGFA	P04085	211 aa		7.79	□□□□□ -1.16
RPAP3-205	ENST00000548211	MPST	P25325	297 aa		7.79	□□□□□ -1.16
RPAP3-205	ENST00000548211	SSTR4	P31391	388 aa		7.79	□□□□□ -1.16
RPAP3-205	ENST00000548211	C8orf34	Q49A92	452 aa		7.79	□□□□□ -1.16
RPAP3-205	ENST00000548211	HGSNAT	Q68CP4	663 aa		7.79	□□□□□ -1.16
RPAP3-205	ENST00000548211	ADAM19	Q9H013	955 aa		7.79	□□□□□ -1.16
RPAP3-205	ENST00000548211	RAX	Q9Y2V3	346 aa		7.79	□□□□□ -1.16
RPAP3-205	ENST00000548211	PTPRA	P18433	802 aa		7.78	□□□□□ -1.16
RPAP3-205	ENST00000548211	EIF1AX	P47813	144 aa	Known RBP	7.78	□□□□□ -1.16
RPAP3-205	ENST00000548211	DUOXA2	Q1HG44	320 aa		7.78	□□□□□ -1.16
RPAP3-205	ENST00000548211	NOM1	Q5C9Z4	860 aa	Known RBP	7.78	□□□□□ -1.16
RPAP3-205	ENST00000548211	DCAF11	Q8TEB1	546 aa		7.78	□□□□□ -1.16
RPAP3-205	ENST00000548211	GTF3C2	Q8WUA4	911 aa	Predicted RBP	7.78	□□□□□ -1.16
RPAP3-205	ENST00000548211	CHRD	Q9H2X0	955 aa		7.78	□□□□□ -1.16
RPAP3-205	ENST00000548211	DZANK1	Q9NVP4	752 aa		7.78	□□□□□ -1.16
RPAP3-205	ENST00000548211	TMEM88B	A6NKF7	163 aa		7.77	□□□□□ -1.17
RPAP3-205	ENST00000548211	MED26	O95402	600 aa		7.77	□□□□□ -1.17
RPAP3-205	ENST00000548211	CES1	P23141	567 aa		7.77	□□□□□ -1.17
RPAP3-205	ENST00000548211	XKR5	Q6UX68	686 aa		7.77	□□□□□ -1.17
RPAP3-205	ENST00000548211	KLHL23	Q8NBE8	558 aa		7.77	□□□□□ -1.17
RPAP3-205	ENST00000548211	STOML1	Q9UBI4	398 aa		7.77	□□□□□ -1.17
RPAP3-205	ENST00000548211	TGFB1	P01137	390 aa		7.76	□□□□□ -1.17
RPAP3-205	ENST00000548211	SSFA2	P28290	1259 aa		7.76	□□□□□ -1.17
RPAP3-205	ENST00000548211	FAM117B	Q6P1L5	589 aa		7.76	□□□□□ -1.17
RPAP3-205	ENST00000548211	SEC31B	Q9NQW1	1179 aa		7.76	□□□□□ -1.17
RPAP3-205	ENST00000548211	PCMTD2	Q9NV79	361 aa		7.76	□□□□□ -1.17
RPAP3-205	ENST00000548211	POLI	Q9UNA4	740 aa		7.76	□□□□□ -1.17
RPAP3-205	ENST00000548211	HMX2	A2RU54	273 aa		7.75	□□□□□ -1.17
RPAP3-205	ENST00000548211		H3BRJ5	948 aa		7.75	□□□□□ -1.17
RPAP3-205	ENST00000548211	DHX15	O43143	795 aa	Known RBP	7.75	□□□□□ -1.17
RPAP3-205	ENST00000548211	IGLV1-40	P01703	118 aa		7.75	□□□□□ -1.17
RPAP3-205	ENST00000548211	MZF1	P28698	734 aa	Predicted RBP	7.75	□□□□□ -1.17
RPAP3-205	ENST00000548211	NLRP12	P59046	1061 aa		7.75	□□□□□ -1.17
RPAP3-205	ENST00000548211	TRIM42	Q8IWZ5	723 aa		7.75	□□□□□ -1.17
RPAP3-205	ENST00000548211	CCDC82	Q8N4S0	544 aa		7.75	□□□□□ -1.17
RPAP3-205	ENST00000548211	SLC7A3	Q8WY07	619 aa		7.75	□□□□□ -1.17
RPAP3-205	ENST00000548211	FAM46A	Q96IP4	442 aa	Known RBP	7.75	□□□□□ -1.17
RPAP3-205	ENST00000548211	PDE2A	O00408	941 aa	Predicted RBP	7.74	□□□□□ -1.17
RPAP3-205	ENST00000548211	EREG	O14944	169 aa		7.74	□□□□□ -1.17
RPAP3-205	ENST00000548211	CD97	P48960	835 aa		7.74	□□□□□ -1.17
RPAP3-205	ENST00000548211	UTP4	Q969X6	686 aa	Known RBP	7.74	□□□□□ -1.17
RPAP3-205	ENST00000548211	CEP41	Q9BYV8	373 aa		7.74	□□□□□ -1.17
RPAP3-205	ENST00000548211	C7orf69	Q9H7B7	122 aa		7.74	□□□□□ -1.17
RPAP3-205	ENST00000548211	PHLDB3	Q6NSJ2	640 aa		7.73	□□□□□ -1.17
RPAP3-205	ENST00000548211	SLC51A	Q86UW1	340 aa		7.73	□□□□□ -1.17
RPAP3-205	ENST00000548211	MYRFL	Q96LU7	910 aa		7.73	□□□□□ -1.17
RPAP3-205	ENST00000548211	C1orf115	Q9H7X2	142 aa		7.73	□□□□□ -1.17
RPAP3-205	ENST00000548211	FOXD3	Q9UJU5	478 aa	Predicted RBP	7.73	□□□□□ -1.17
RPAP3-205	ENST00000548211	SOX13	Q9UN79	622 aa		7.73	□□□□□ -1.17
RPAP3-205	ENST00000548211	RPLP1	P05386	114 aa	Known RBP	7.72	□□□□□ -1.17
RPAP3-205	ENST00000548211	PCSK2	P16519	638 aa		7.72	□□□□□ -1.17
RPAP3-205	ENST00000548211	PREP	P48147	710 aa		7.72	□□□□□ -1.17
RPAP3-205	ENST00000548211	CABP4	P57796	275 aa		7.72	□□□□□ -1.17
RPAP3-205	ENST00000548211	PIP4K2B	P78356	416 aa		7.72	□□□□□ -1.17
RPAP3-205	ENST00000548211	ZDHHC13	Q8IUH4	622 aa		7.72	□□□□□ -1.17
RPAP3-205	ENST00000548211	OSMR	Q99650	979 aa		7.72	□□□□□ -1.17
RPAP3-205	ENST00000548211	ZKSCAN3	Q9BRR0	538 aa		7.72	□□□□□ -1.17
RPAP3-205	ENST00000548211	FAM177B	A6PVY3	158 aa		7.71	□□□□□ -1.18
RPAP3-205	ENST00000548211	SOX1	O00570	391 aa	Predicted RBP	7.71	□□□□□ -1.18
RPAP3-205	ENST00000548211	TNFRSF21	O75509	655 aa		7.71	□□□□□ -1.18
RPAP3-205	ENST00000548211	NFIA	Q12857	509 aa		7.71	□□□□□ -1.18
RPAP3-205	ENST00000548211	AAMP	Q13685	434 aa		7.71	□□□□□ -1.18
RPAP3-205	ENST00000548211	TTC16	Q8NEE8	873 aa		7.71	□□□□□ -1.18
RPAP3-205	ENST00000548211	NXPE3	Q969Y0	559 aa		7.71	□□□□□ -1.18
RPAP3-205	ENST00000548211	ANO2	Q9NQ90	1003 aa		7.71	□□□□□ -1.18
RPAP3-205	ENST00000548211	LATS2	Q9NRM7	1088 aa		7.71	□□□□□ -1.18
RPAP3-205	ENST00000548211	ADAMTS4	O75173	837 aa		7.7	□□□□□ -1.18
RPAP3-205	ENST00000548211	BMP3	P12645	472 aa		7.7	□□□□□ -1.18
RPAP3-205	ENST00000548211	VN1R5	Q7Z5H4	357 aa		7.7	□□□□□ -1.18
RPAP3-205	ENST00000548211	FAM20C	Q8IXL6	584 aa		7.7	□□□□□ -1.18
RPAP3-205	ENST00000548211	TMEM102	Q8N9M5	508 aa	Predicted RBP	7.7	□□□□□ -1.18
RPAP3-205	ENST00000548211	WNT8B	Q93098	351 aa		7.7	□□□□□ -1.18
RPAP3-205	ENST00000548211	RUSC1	Q9BVN2	902 aa		7.7	□□□□□ -1.18
RPAP3-205	ENST00000548211	OSGEP	Q9NPF4	335 aa		7.7	□□□□□ -1.18
RPAP3-205	ENST00000548211	CCDC87	Q9NVE4	849 aa		7.7	□□□□□ -1.18
RPAP3-205	ENST00000548211	GSC2	O15499	205 aa		7.69	□□□□□ -1.18
RPAP3-205	ENST00000548211	FZD6	O60353	706 aa		7.69	□□□□□ -1.18
RPAP3-205	ENST00000548211	UVSSA	Q2YD98	709 aa		7.69	□□□□□ -1.18
RPAP3-205	ENST00000548211	RNF43	Q68DV7	783 aa		7.69	□□□□□ -1.18
RPAP3-205	ENST00000548211	PMEPA1	Q969W9	287 aa		7.69	□□□□□ -1.18
RPAP3-205	ENST00000548211	KCNF1	Q9H3M0	494 aa		7.69	□□□□□ -1.18
RPAP3-205	ENST00000548211	GTF3C3	Q9Y5Q9	886 aa		7.69	□□□□□ -1.18
RPAP3-205	ENST00000548211	PRR19	A6NJB7	356 aa		7.68	□□□□□ -1.18
RPAP3-205	ENST00000548211	SART1	O43290	800 aa	Known RBP	7.68	□□□□□ -1.18
RPAP3-205	ENST00000548211	PHACTR2	O75167	634 aa		7.68	□□□□□ -1.18
RPAP3-205	ENST00000548211	NPR3	P17342	541 aa		7.68	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms