RNA–Protein interactions for RNA: ENST00000547856.5

RAPGEF3-216, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,659 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-216ENST00000547856 RBM8AQ9Y5S9 174 aaKnown RBP16.61■□□□□ 0.25
RAPGEF3-216ENST00000547856 TAF6LQ9Y6J9 622 aa16.61■□□□□ 0.25
RAPGEF3-216ENST00000547856 CCDC30Q5VVM6 783 aa16.6■□□□□ 0.25
RAPGEF3-216ENST00000547856 CREB3L3Q68CJ9 461 aa16.6■□□□□ 0.25
RAPGEF3-216ENST00000547856 PPM1EQ8WY54 764 aa16.6■□□□□ 0.25
RAPGEF3-216ENST00000547856 WDR24Q96S15 920 aa16.6■□□□□ 0.25
RAPGEF3-216ENST00000547856 NAT10Q9H0A0 1025 aaKnown RBP16.6■□□□□ 0.25
RAPGEF3-216ENST00000547856 SUGCTQ9HAC7 445 aa16.6■□□□□ 0.25
RAPGEF3-216ENST00000547856 BRD2P25440 801 aaKnown RBP16.6■□□□□ 0.25
RAPGEF3-216ENST00000547856 DPCR1Q3MIW9 517 aa16.6■□□□□ 0.25
RAPGEF3-216ENST00000547856 SDF4Q9BRK5 362 aa16.6■□□□□ 0.25
RAPGEF3-216ENST00000547856 FOXO3O43524 673 aa16.59■□□□□ 0.25
RAPGEF3-216ENST00000547856 CCDC172P0C7W6 258 aa16.59■□□□□ 0.25
RAPGEF3-216ENST00000547856 LMOD1P29536 600 aaPredicted RBP16.59■□□□□ 0.25
RAPGEF3-216ENST00000547856 RESTQ13127 1097 aa16.59■□□□□ 0.25
RAPGEF3-216ENST00000547856 ZRSR1Q15695 479 aaKnown RBP16.59■□□□□ 0.25
RAPGEF3-216ENST00000547856 MICALL1Q8N3F8 863 aa16.59■□□□□ 0.25
RAPGEF3-216ENST00000547856 CXorf56Q9H5V9 222 aa16.59■□□□□ 0.25
RAPGEF3-216ENST00000547856 PIK3C2AO00443 1686 aa16.59■□□□□ 0.25
RAPGEF3-216ENST00000547856 XRN1Q8IZH2 1706 aaKnown RBP16.59■□□□□ 0.25
RAPGEF3-216ENST00000547856 CTAGE5O15320 804 aa16.59■□□□□ 0.25
RAPGEF3-216ENST00000547856 KCNA6P17658 529 aa16.59■□□□□ 0.25
RAPGEF3-216ENST00000547856 CEP83Q9Y592 693 aa16.59■□□□□ 0.25
RAPGEF3-216ENST00000547856 AOX1Q06278 1338 aa16.58■□□□□ 0.25
RAPGEF3-216ENST00000547856 TTC41PQ6P2S7 1318 aa16.58■□□□□ 0.25
RAPGEF3-216ENST00000547856 PPP1R42Q7Z4L9 355 aa16.58■□□□□ 0.25
RAPGEF3-216ENST00000547856 FSIP1Q8NA03 581 aa16.58■□□□□ 0.25
RAPGEF3-216ENST00000547856 SIL1Q9H173 461 aa16.58■□□□□ 0.25
RAPGEF3-216ENST00000547856 CFAP45Q9UL16 551 aa16.58■□□□□ 0.25
RAPGEF3-216ENST00000547856 SOS1Q07889 1333 aaPredicted RBP16.58■□□□□ 0.24
RAPGEF3-216ENST00000547856 ME1P48163 572 aa16.58■□□□□ 0.24
RAPGEF3-216ENST00000547856 APOBRQ0VD83 1088 aa16.58■□□□□ 0.24
RAPGEF3-216ENST00000547856 NECTIN1Q15223 517 aa16.58■□□□□ 0.24
RAPGEF3-216ENST00000547856 BLOC1S2Q6QNY1 142 aa16.58■□□□□ 0.24
RAPGEF3-216ENST00000547856 FAM212AQ96EL1 285 aa16.58■□□□□ 0.24
RAPGEF3-216ENST00000547856 TM6SF1Q9BZW5 370 aa16.58■□□□□ 0.24
RAPGEF3-216ENST00000547856 UBTFL1P0CB47 393 aaPredicted RBP16.57■□□□□ 0.24
RAPGEF3-216ENST00000547856 CORO7P57737 925 aa16.57■□□□□ 0.24
RAPGEF3-216ENST00000547856 CCDC91Q7Z6B0 441 aa16.57■□□□□ 0.24
RAPGEF3-216ENST00000547856 RUFY2Q8WXA3 655 aa16.57■□□□□ 0.24
RAPGEF3-216ENST00000547856 TSPYL4Q9UJ04 414 aa16.57■□□□□ 0.24
RAPGEF3-216ENST00000547856 CRB1P82279 1406 aa16.57■□□□□ 0.24
RAPGEF3-216ENST00000547856 MTHFSDQ2M296 383 aaKnown RBP16.57■□□□□ 0.24
RAPGEF3-216ENST00000547856 CCDC102AQ96A19 550 aa16.57■□□□□ 0.24
RAPGEF3-216ENST00000547856 FAM227BQ96M60 508 aa16.57■□□□□ 0.24
RAPGEF3-216ENST00000547856 STK31Q9BXU1 1019 aa16.57■□□□□ 0.24
RAPGEF3-216ENST00000547856 BICC1Q9H694 974 aaKnown RBP16.57■□□□□ 0.24
RAPGEF3-216ENST00000547856 AKAP2Q9Y2D5 859 aa16.57■□□□□ 0.24
RAPGEF3-216ENST00000547856 SBNO1A3KN83 1393 aa16.57■□□□□ 0.24
RAPGEF3-216ENST00000547856 FLT4P35916 1363 aa16.57■□□□□ 0.24
RAPGEF3-216ENST00000547856 VWA3AA6NCI4 1184 aa16.56■□□□□ 0.24
RAPGEF3-216ENST00000547856 TUBB4AP04350 444 aa16.56■□□□□ 0.24
RAPGEF3-216ENST00000547856 ATP1A3P13637 1013 aa16.56■□□□□ 0.24
RAPGEF3-216ENST00000547856 FLIIQ13045 1269 aa16.56■□□□□ 0.24
RAPGEF3-216ENST00000547856 OS9Q13438 667 aaPredicted RBP16.56■□□□□ 0.24
RAPGEF3-216ENST00000547856 LRRC31Q6UY01 552 aa16.56■□□□□ 0.24
RAPGEF3-216ENST00000547856 ZSCAN16Q9H4T2 348 aaPredicted RBP16.56■□□□□ 0.24
RAPGEF3-216ENST00000547856 PUF60Q9UHX1 559 aaKnown RBP16.56■□□□□ 0.24
RAPGEF3-216ENST00000547856 ARHGEF10O15013 1369 aa16.56■□□□□ 0.24
RAPGEF3-216ENST00000547856 SRGAP3O43295 1099 aa16.56■□□□□ 0.24
RAPGEF3-216ENST00000547856 TOB2Q14106 344 aaPredicted RBP16.56■□□□□ 0.24
RAPGEF3-216ENST00000547856 DNAJC21Q5F1R6 531 aaKnown RBP16.56■□□□□ 0.24
RAPGEF3-216ENST00000547856 AXDND1Q5T1B0 1012 aaPredicted RBP16.56■□□□□ 0.24
RAPGEF3-216ENST00000547856 DHX58Q96C10 678 aa16.56■□□□□ 0.24
RAPGEF3-216ENST00000547856 EYA1Q99502 592 aa16.56■□□□□ 0.24
RAPGEF3-216ENST00000547856 A0A1B0GVL5 298 aa16.55■□□□□ 0.24
RAPGEF3-216ENST00000547856 SLC27A2O14975 620 aa16.55■□□□□ 0.24
RAPGEF3-216ENST00000547856 CCP110O43303 1012 aa16.55■□□□□ 0.24
RAPGEF3-216ENST00000547856 HSP90B1P14625 803 aaKnown RBP16.55■□□□□ 0.24
RAPGEF3-216ENST00000547856 NUTM2GQ5VZR2 741 aa16.55■□□□□ 0.24
RAPGEF3-216ENST00000547856 MCTP2Q6DN12 878 aa16.55■□□□□ 0.24
RAPGEF3-216ENST00000547856 RSRC2Q7L4I2 434 aaKnown RBP16.55■□□□□ 0.24
RAPGEF3-216ENST00000547856 GOLGA1Q92805 767 aa16.55■□□□□ 0.24
RAPGEF3-216ENST00000547856 CEP170BQ9Y4F5 1589 aaPredicted RBP16.55■□□□□ 0.24
RAPGEF3-216ENST00000547856 TUBGCP6Q96RT7 1819 aa16.55■□□□□ 0.24
RAPGEF3-216ENST00000547856 AMPHP49418 695 aa16.55■□□□□ 0.24
RAPGEF3-216ENST00000547856 MAP3K9P80192 1104 aa16.55■□□□□ 0.24
RAPGEF3-216ENST00000547856 USP44Q9H0E7 712 aa16.55■□□□□ 0.24
RAPGEF3-216ENST00000547856 TXLNAP40222 546 aa16.54■□□□□ 0.24
RAPGEF3-216ENST00000547856 NLRP6P59044 892 aa16.54■□□□□ 0.24
RAPGEF3-216ENST00000547856 GUCY1B3Q02153 619 aa16.54■□□□□ 0.24
RAPGEF3-216ENST00000547856 USP28Q96RU2 1077 aa16.54■□□□□ 0.24
RAPGEF3-216ENST00000547856 MRFAP1Q9Y605 127 aa16.54■□□□□ 0.24
RAPGEF3-216ENST00000547856 MARF1Q9Y4F3 1742 aaKnown RBP16.54■□□□□ 0.24
RAPGEF3-216ENST00000547856 MAP2K7O14733 419 aa16.54■□□□□ 0.24
RAPGEF3-216ENST00000547856 FAM160A1Q05DH4 1040 aa16.54■□□□□ 0.24
RAPGEF3-216ENST00000547856 MMS22LQ6ZRQ5 1243 aa16.54■□□□□ 0.24
RAPGEF3-216ENST00000547856 CNNM3Q8NE01 707 aa16.54■□□□□ 0.24
RAPGEF3-216ENST00000547856 RABGGTAQ92696 567 aa16.54■□□□□ 0.24
RAPGEF3-216ENST00000547856 DPF2Q92785 391 aa16.54■□□□□ 0.24
RAPGEF3-216ENST00000547856 PPP2R2CQ9Y2T4 447 aa16.54■□□□□ 0.24
RAPGEF3-216ENST00000547856 KDRP35968 1356 aa16.54■□□□□ 0.24
RAPGEF3-216ENST00000547856 PSMA5P28066 241 aa16.53■□□□□ 0.24
RAPGEF3-216ENST00000547856 MNAT1P51948 309 aa16.53■□□□□ 0.24
RAPGEF3-216ENST00000547856 FANCCQ00597 558 aa16.53■□□□□ 0.24
RAPGEF3-216ENST00000547856 KARSQ15046 597 aaKnown RBP16.53■□□□□ 0.24
RAPGEF3-216ENST00000547856 DNAAF4Q8WXU2 420 aa16.53■□□□□ 0.24
RAPGEF3-216ENST00000547856 SUFUQ9UMX1 484 aa16.53■□□□□ 0.24
RAPGEF3-216ENST00000547856 MAP2K2P36507 400 aa16.53■□□□□ 0.24
RAPGEF3-216ENST00000547856 PLEKHO1Q53GL0 409 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 223.6 ms