RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 MKNK1Q9BUB5 465 aa7.67□□□□□ -1.18
SCAF11-210ENST00000547654 FNDC3AQ9Y2H6 1198 aaKnown RBP7.67□□□□□ -1.18
SCAF11-210ENST00000547654 TGFB1P01137 390 aa7.66□□□□□ -1.18
SCAF11-210ENST00000547654 CDC25BP30305 580 aa7.66□□□□□ -1.18
SCAF11-210ENST00000547654 UVSSAQ2YD98 709 aa7.66□□□□□ -1.18
SCAF11-210ENST00000547654 UBL7Q96S82 380 aaPredicted RBP7.66□□□□□ -1.18
SCAF11-210ENST00000547654 CARD10Q9BWT7 1032 aa7.66□□□□□ -1.18
SCAF11-210ENST00000547654 KIAA1324LA8MWY0 1029 aaPredicted RBP7.65□□□□□ -1.18
SCAF11-210ENST00000547654 GRIK1P39086 918 aa7.65□□□□□ -1.18
SCAF11-210ENST00000547654 ZAP70P43403 619 aa7.65□□□□□ -1.18
SCAF11-210ENST00000547654 COL13A1Q5TAT6 717 aaPredicted RBP7.65□□□□□ -1.18
SCAF11-210ENST00000547654 ARID1BQ8NFD5 2236 aaPredicted RBP7.65□□□□□ -1.18
SCAF11-210ENST00000547654 COL17A1Q9UMD9 1497 aaPredicted RBP7.65□□□□□ -1.18
SCAF11-210ENST00000547654 PPP1R15AO75807 674 aaPredicted RBP7.64□□□□□ -1.19
SCAF11-210ENST00000547654 KLHL23Q8NBE8 558 aa7.64□□□□□ -1.19
SCAF11-210ENST00000547654 RASSF4Q9H2L5 321 aa7.64□□□□□ -1.19
SCAF11-210ENST00000547654 PODXL2Q9NZ53 605 aa7.64□□□□□ -1.19
SCAF11-210ENST00000547654 FSCN2O14926 492 aa7.63□□□□□ -1.19
SCAF11-210ENST00000547654 PTPRAP18433 802 aa7.63□□□□□ -1.19
SCAF11-210ENST00000547654 GP2P55259 537 aaKnown RBP7.63□□□□□ -1.19
SCAF11-210ENST00000547654 NFIAQ12857 509 aa7.63□□□□□ -1.19
SCAF11-210ENST00000547654 DUOXA2Q1HG44 320 aa7.63□□□□□ -1.19
SCAF11-210ENST00000547654 NCAPG2Q86XI2 1143 aa7.63□□□□□ -1.19
SCAF11-210ENST00000547654 ARMC10Q8N2F6 343 aa7.63□□□□□ -1.19
SCAF11-210ENST00000547654 GPR152Q8TDT2 470 aa7.63□□□□□ -1.19
SCAF11-210ENST00000547654 C7orf69Q9H7B7 122 aa7.63□□□□□ -1.19
SCAF11-210ENST00000547654 KCNK4Q9NYG8 393 aa7.63□□□□□ -1.19
SCAF11-210ENST00000547654 ZBTB39O15060 712 aa7.62□□□□□ -1.19
SCAF11-210ENST00000547654 SSFA2P28290 1259 aa7.62□□□□□ -1.19
SCAF11-210ENST00000547654 TXKP42681 527 aa7.62□□□□□ -1.19
SCAF11-210ENST00000547654 NAA30Q147X3 362 aaPredicted RBP7.62□□□□□ -1.19
SCAF11-210ENST00000547654 ZDHHC13Q8IUH4 622 aa7.62□□□□□ -1.19
SCAF11-210ENST00000547654 DBNDD2Q9BQY9 259 aa7.62□□□□□ -1.19
SCAF11-210ENST00000547654 ABI2Q9NYB9 513 aaPredicted RBP7.62□□□□□ -1.19
SCAF11-210ENST00000547654 OAS3Q9Y6K5 1087 aaKnown RBP7.62□□□□□ -1.19
SCAF11-210ENST00000547654 SART1O43290 800 aaKnown RBP7.61□□□□□ -1.19
SCAF11-210ENST00000547654 MED26O95402 600 aa7.61□□□□□ -1.19
SCAF11-210ENST00000547654 EPHA1P21709 976 aa7.61□□□□□ -1.19
SCAF11-210ENST00000547654 INTS5Q6P9B9 1019 aaKnown RBP7.61□□□□□ -1.19
SCAF11-210ENST00000547654 KIAA1211Q6ZU35 1233 aa7.61□□□□□ -1.19
SCAF11-210ENST00000547654 TRIM42Q8IWZ5 723 aa7.61□□□□□ -1.19
SCAF11-210ENST00000547654 ABTB2Q8N961 1025 aa7.61□□□□□ -1.19
SCAF11-210ENST00000547654 MYRFLQ96LU7 910 aa7.61□□□□□ -1.19
SCAF11-210ENST00000547654 PBX4Q9BYU1 374 aa7.61□□□□□ -1.19
SCAF11-210ENST00000547654 SEC31BQ9NQW1 1179 aa7.61□□□□□ -1.19
SCAF11-210ENST00000547654 SEPT3Q9UH03 358 aa7.61□□□□□ -1.19
SCAF11-210ENST00000547654 CARNS1A5YM72 827 aa7.6□□□□□ -1.19
SCAF11-210ENST00000547654 KIF4AO95239 1232 aa7.6□□□□□ -1.19
SCAF11-210ENST00000547654 CABP4P57796 275 aa7.6□□□□□ -1.19
SCAF11-210ENST00000547654 FZD5Q13467 585 aa7.6□□□□□ -1.19
SCAF11-210ENST00000547654 RNF43Q68DV7 783 aa7.6□□□□□ -1.19
SCAF11-210ENST00000547654 UBASH3BQ8TF42 649 aa7.6□□□□□ -1.19
SCAF11-210ENST00000547654 FAM46AQ96IP4 442 aaKnown RBP7.6□□□□□ -1.19
SCAF11-210ENST00000547654 KRTAP17-1Q9BYP8 105 aa7.6□□□□□ -1.19
SCAF11-210ENST00000547654 KCNF1Q9H3M0 494 aa7.6□□□□□ -1.19
SCAF11-210ENST00000547654 SH2B1Q9NRF2 756 aaPredicted RBP7.6□□□□□ -1.19
SCAF11-210ENST00000547654 STIM2Q9P246 746 aa7.6□□□□□ -1.19
SCAF11-210ENST00000547654 HMX2A2RU54 273 aa7.59□□□□□ -1.19
SCAF11-210ENST00000547654 CYP2E1P05181 493 aaPredicted RBP7.59□□□□□ -1.19
SCAF11-210ENST00000547654 ATP2B4P23634 1241 aa7.59□□□□□ -1.19
SCAF11-210ENST00000547654 FOXD4L4Q8WXT5 416 aaPredicted RBP7.59□□□□□ -1.19
SCAF11-210ENST00000547654 H3BRJ5 948 aa7.58□□□□□ -1.2
SCAF11-210ENST00000547654 DDX3YO15523 660 aaKnown RBP7.58□□□□□ -1.2
SCAF11-210ENST00000547654 SPINK2P20155 84 aa7.58□□□□□ -1.2
SCAF11-210ENST00000547654 ANKRD34AQ69YU3 496 aa7.58□□□□□ -1.2
SCAF11-210ENST00000547654 ZNF438Q7Z4V0 828 aa7.58□□□□□ -1.2
SCAF11-210ENST00000547654 FAM20CQ8IXL6 584 aa7.58□□□□□ -1.2
SCAF11-210ENST00000547654 ADAM11O75078 769 aa7.57□□□□□ -1.2
SCAF11-210ENST00000547654 TAL1P17542 331 aaPredicted RBP7.57□□□□□ -1.2
SCAF11-210ENST00000547654 PIP4K2BP78356 416 aa7.57□□□□□ -1.2
SCAF11-210ENST00000547654 PDE12Q6L8Q7 609 aaKnown RBP7.57□□□□□ -1.2
SCAF11-210ENST00000547654 FDX2Q6P4F2 183 aa7.57□□□□□ -1.2
SCAF11-210ENST00000547654 ADAMTSL4Q6UY14 1074 aa7.57□□□□□ -1.2
SCAF11-210ENST00000547654 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.57□□□□□ -1.2
SCAF11-210ENST00000547654 CLEC10AQ8IUN9 316 aa7.57□□□□□ -1.2
SCAF11-210ENST00000547654 CEP120Q8N960 986 aa7.57□□□□□ -1.2
SCAF11-210ENST00000547654 RNF208Q9H0X6 261 aa7.57□□□□□ -1.2
SCAF11-210ENST00000547654 KANSL3Q9P2N6 904 aa7.57□□□□□ -1.2
SCAF11-210ENST00000547654 TM4SF5O14894 197 aa7.56□□□□□ -1.2
SCAF11-210ENST00000547654 BMP3P12645 472 aa7.56□□□□□ -1.2
SCAF11-210ENST00000547654 NPR3P17342 541 aa7.56□□□□□ -1.2
SCAF11-210ENST00000547654 NLRP12P59046 1061 aa7.56□□□□□ -1.2
SCAF11-210ENST00000547654 ECM1Q16610 540 aa7.56□□□□□ -1.2
SCAF11-210ENST00000547654 BEND4Q6ZU67 534 aa7.56□□□□□ -1.2
SCAF11-210ENST00000547654 WNT8BQ93098 351 aa7.56□□□□□ -1.2
SCAF11-210ENST00000547654 KLHDC7BQ96G42 594 aa7.56□□□□□ -1.2
SCAF11-210ENST00000547654 FMNL2Q96PY5 1086 aa7.56□□□□□ -1.2
SCAF11-210ENST00000547654 ELP3Q9H9T3 547 aa7.56□□□□□ -1.2
SCAF11-210ENST00000547654 TMEM63CQ9P1W3 806 aa7.56□□□□□ -1.2
SCAF11-210ENST00000547654 GAS2O43903 313 aaKnown RBP7.55□□□□□ -1.2
SCAF11-210ENST00000547654 PREPP48147 710 aa7.55□□□□□ -1.2
SCAF11-210ENST00000547654 DTX1Q86Y01 620 aa7.55□□□□□ -1.2
SCAF11-210ENST00000547654 SHKBP1Q8TBC3 707 aa7.55□□□□□ -1.2
SCAF11-210ENST00000547654 NUDT16Q96DE0 195 aaKnown RBP7.55□□□□□ -1.2
SCAF11-210ENST00000547654 POP1Q99575 1024 aaKnown RBP7.55□□□□□ -1.2
SCAF11-210ENST00000547654 FAM83CQ9BQN1 747 aa7.55□□□□□ -1.2
SCAF11-210ENST00000547654 ADAM19Q9H013 955 aa7.55□□□□□ -1.2
SCAF11-210ENST00000547654 HIF3AQ9Y2N7 669 aa7.55□□□□□ -1.2
SCAF11-210ENST00000547654 RNF114Q9Y508 228 aa7.55□□□□□ -1.2
SCAF11-210ENST00000547654 SLC7A3Q8WY07 619 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms