RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 PODXL2Q9NZ53 605 aa15.06■□□□□ 0
SCAF11-209ENST00000547018 E7EWF7 191 aa15.05■□□□□ 0
SCAF11-209ENST00000547018 GPAA1O43292 621 aa15.05■□□□□ 0
SCAF11-209ENST00000547018 FGAP02671 866 aa15.05■□□□□ 0
SCAF11-209ENST00000547018 MEX3CQ5U5Q3 659 aaKnown RBP15.05■□□□□ 0
SCAF11-209ENST00000547018 CKAP2LQ8IYA6 745 aa15.05■□□□□ 0
SCAF11-209ENST00000547018 PKNOX2Q96KN3 472 aa15.05■□□□□ 0
SCAF11-209ENST00000547018 WWC3Q9ULE0 1092 aa15.05■□□□□ 0
SCAF11-209ENST00000547018 PDE8AO60658 829 aa15.05■□□□□ -0
SCAF11-209ENST00000547018 CCDC102BQ68D86 513 aa15.05■□□□□ -0
SCAF11-209ENST00000547018 RALYLQ86SE5 291 aaKnown RBP15.05■□□□□ -0
SCAF11-209ENST00000547018 UTP14AQ9BVJ6 771 aaKnown RBP15.05■□□□□ -0
SCAF11-209ENST00000547018 SH3TC1Q8TE82 1336 aa15.05■□□□□ -0
SCAF11-209ENST00000547018 VPS37DQ86XT2 251 aa15.05■□□□□ -0
SCAF11-209ENST00000547018 PIH1D3Q9NQM4 214 aaKnown RBP15.05■□□□□ -0
SCAF11-209ENST00000547018 MED23Q9ULK4 1368 aa15.05■□□□□ -0
SCAF11-209ENST00000547018 ZMYM1Q5SVZ6 1142 aa15.04■□□□□ -0
SCAF11-209ENST00000547018 MYL10Q9BUA6 226 aa15.04■□□□□ -0
SCAF11-209ENST00000547018 TM6SF1Q9BZW5 370 aa15.04■□□□□ -0
SCAF11-209ENST00000547018 RIPOR2Q9Y4F9 1068 aa15.04■□□□□ -0
SCAF11-209ENST00000547018 SPATA31A1Q5TZJ5 1347 aa15.04■□□□□ -0
SCAF11-209ENST00000547018 TOM1O60784 492 aa15.04■□□□□ -0
SCAF11-209ENST00000547018 MAGEB6Q8N7X4 407 aa15.04■□□□□ -0
SCAF11-209ENST00000547018 BICD2Q8TD16 824 aa15.04■□□□□ -0
SCAF11-209ENST00000547018 ZKSCAN3Q9BRR0 538 aa15.04■□□□□ -0
SCAF11-209ENST00000547018 SIPA1L3O60292 1781 aaPredicted RBP15.04■□□□□ -0
SCAF11-209ENST00000547018 MBD3O95983 291 aa15.04■□□□□ -0
SCAF11-209ENST00000547018 SCRN1Q12765 414 aa15.04■□□□□ -0
SCAF11-209ENST00000547018 INTS5Q6P9B9 1019 aaKnown RBP15.04■□□□□ -0
SCAF11-209ENST00000547018 LRP2BPQ9P2M1 347 aa15.04■□□□□ -0
SCAF11-209ENST00000547018 PDE8BO95263 885 aa15.03■□□□□ -0
SCAF11-209ENST00000547018 KRT32Q14532 448 aa15.03■□□□□ -0
SCAF11-209ENST00000547018 ANKRD1Q15327 319 aa15.03■□□□□ -0
SCAF11-209ENST00000547018 VSIG10Q8N0Z9 540 aa15.03■□□□□ -0
SCAF11-209ENST00000547018 AIDAQ96BJ3 306 aa15.03■□□□□ -0
SCAF11-209ENST00000547018 HMG20BQ9P0W2 317 aa15.03■□□□□ -0
SCAF11-209ENST00000547018 ATP6V1DQ9Y5K8 247 aa15.03■□□□□ -0
SCAF11-209ENST00000547018 POLR3DP05423 398 aaPredicted RBP15.03■□□□□ -0
SCAF11-209ENST00000547018 IL6STP40189 918 aaPredicted RBP15.03■□□□□ -0
SCAF11-209ENST00000547018 GYG1P46976 350 aa15.03■□□□□ -0
SCAF11-209ENST00000547018 DHX32Q7L7V1 743 aaKnown RBP15.03■□□□□ -0
SCAF11-209ENST00000547018 ZNF532Q9HCE3 1301 aa15.03■□□□□ -0
SCAF11-209ENST00000547018 ZNF213O14771 459 aa15.02■□□□□ -0
SCAF11-209ENST00000547018 IGHMBP2P38935 993 aaKnown RBP15.02■□□□□ -0
SCAF11-209ENST00000547018 IMMTQ16891 758 aaKnown RBP15.02■□□□□ -0
SCAF11-209ENST00000547018 SRCAPQ6ZRS2 3230 aa15.02■□□□□ -0
SCAF11-209ENST00000547018 SLC51AQ86UW1 340 aa15.02■□□□□ -0
SCAF11-209ENST00000547018 ARMT1Q9H993 441 aa15.02■□□□□ -0
SCAF11-209ENST00000547018 KCPQ6ZWJ8 1503 aa15.02■□□□□ -0
SCAF11-209ENST00000547018 BCL9O00512 1426 aa15.02■□□□□ -0
SCAF11-209ENST00000547018 CPLX1O14810 134 aa15.02□□□□□ -0.01
SCAF11-209ENST00000547018 GNPATO15228 680 aa15.02□□□□□ -0.01
SCAF11-209ENST00000547018 CHAF1AQ13111 956 aaPredicted RBP15.02□□□□□ -0.01
SCAF11-209ENST00000547018 SPATA32Q96LK8 384 aa15.02□□□□□ -0.01
SCAF11-209ENST00000547018 NAP1L5Q96NT1 182 aaPredicted RBP15.02□□□□□ -0.01
SCAF11-209ENST00000547018 A0A087WWV3 80 aa15.02□□□□□ -0.01
SCAF11-209ENST00000547018 PRKAB2O43741 272 aa15.02□□□□□ -0.01
SCAF11-209ENST00000547018 ERFEQ4G0M1 354 aa15.02□□□□□ -0.01
SCAF11-209ENST00000547018 NFXL1Q6ZNB6 911 aa15.02□□□□□ -0.01
SCAF11-209ENST00000547018 C3orf67Q6ZVT6 689 aa15.02□□□□□ -0.01
SCAF11-209ENST00000547018 ERCC4Q92889 916 aaPredicted RBP15.02□□□□□ -0.01
SCAF11-209ENST00000547018 SYAP1Q96A49 352 aaPredicted RBP15.02□□□□□ -0.01
SCAF11-209ENST00000547018 PALLDQ8WX93 1383 aa15.01□□□□□ -0.01
SCAF11-209ENST00000547018 MINDY4BA8MYZ0 360 aa15.01□□□□□ -0.01
SCAF11-209ENST00000547018 EIF5P55010 431 aaKnown RBP15.01□□□□□ -0.01
SCAF11-209ENST00000547018 TTC6Q86TZ1 520 aa15.01□□□□□ -0.01
SCAF11-209ENST00000547018 UTRNP46939 3433 aa15.01□□□□□ -0.01
SCAF11-209ENST00000547018 KLF18A0A0U1RQI7 1052 aa15.01□□□□□ -0.01
SCAF11-209ENST00000547018 B4E1Z4 1266 aa15.01□□□□□ -0.01
SCAF11-209ENST00000547018 CSF1RP07333 972 aa15.01□□□□□ -0.01
SCAF11-209ENST00000547018 KRT85P78386 507 aa15.01□□□□□ -0.01
SCAF11-209ENST00000547018 CTDSPL2Q05D32 466 aa15.01□□□□□ -0.01
SCAF11-209ENST00000547018 TRDNQ13061 729 aa15.01□□□□□ -0.01
SCAF11-209ENST00000547018 CLEC17AQ6ZS10 378 aa15.01□□□□□ -0.01
SCAF11-209ENST00000547018 MICU3Q86XE3 530 aa15.01□□□□□ -0.01
SCAF11-209ENST00000547018 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.01□□□□□ -0.01
SCAF11-209ENST00000547018 TSPY26PQ9H489 355 aa15.01□□□□□ -0.01
SCAF11-209ENST00000547018 HELLSQ9NRZ9 838 aa15.01□□□□□ -0.01
SCAF11-209ENST00000547018 RAI14Q9P0K7 980 aa15.01□□□□□ -0.01
SCAF11-209ENST00000547018 MTMR7Q9Y216 660 aa15.01□□□□□ -0.01
SCAF11-209ENST00000547018 PTPDC1A2A3K4 754 aa15□□□□□ -0.01
SCAF11-209ENST00000547018 GOLGA8BA8MQT2 603 aa15□□□□□ -0.01
SCAF11-209ENST00000547018 PRC1O43663 620 aa15□□□□□ -0.01
SCAF11-209ENST00000547018 CIAO1O76071 339 aa15□□□□□ -0.01
SCAF11-209ENST00000547018 ARFGEF2Q9Y6D5 1785 aa15□□□□□ -0.01
SCAF11-209ENST00000547018 USPL1Q5W0Q7 1092 aa15□□□□□ -0.01
SCAF11-209ENST00000547018 LRSAM1Q6UWE0 723 aa15□□□□□ -0.01
SCAF11-209ENST00000547018 NKX2-3Q8TAU0 364 aa15□□□□□ -0.01
SCAF11-209ENST00000547018 TFCP2L1Q9NZI6 479 aa15□□□□□ -0.01
SCAF11-209ENST00000547018 USP25Q9UHP3 1055 aa15□□□□□ -0.01
SCAF11-209ENST00000547018 MBD4O95243 580 aa15□□□□□ -0.01
SCAF11-209ENST00000547018 LIG1P18858 919 aa15□□□□□ -0.01
SCAF11-209ENST00000547018 TRIM28Q13263 835 aaKnown RBP15□□□□□ -0.01
SCAF11-209ENST00000547018 RASGRF1Q13972 1273 aa15□□□□□ -0.01
SCAF11-209ENST00000547018 ZNF830Q96NB3 372 aaPredicted RBP15□□□□□ -0.01
SCAF11-209ENST00000547018 CMTR1Q8N1G2 835 aaKnown RBP14.99□□□□□ -0.01
SCAF11-209ENST00000547018 GTF3C6Q969F1 213 aa14.99□□□□□ -0.01
SCAF11-209ENST00000547018 MRC1P22897 1456 aa14.99□□□□□ -0.01
SCAF11-209ENST00000547018 SMIM22K7EJ46 135 aa14.99□□□□□ -0.01
SCAF11-209ENST00000547018 ATP2B1P20020 1258 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms