RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 RTL5Q5HYW3 569 aaPredicted RBP14.17□□□□□ -0.14
TMEM116-203ENST00000546537 OGFOD1Q8N543 542 aa14.17□□□□□ -0.14
TMEM116-203ENST00000546537 PLBD2Q8NHP8 589 aa14.17□□□□□ -0.14
TMEM116-203ENST00000546537 SLC10A4Q96EP9 437 aa14.17□□□□□ -0.14
TMEM116-203ENST00000546537 SEC31BQ9NQW1 1179 aa14.17□□□□□ -0.14
TMEM116-203ENST00000546537 RBM27Q9P2N5 1060 aaKnown RBP14.17□□□□□ -0.14
TMEM116-203ENST00000546537 FZD1Q9UP38 647 aa14.17□□□□□ -0.14
TMEM116-203ENST00000546537 ATP5J2-PTCD1G3V325 749 aa14.16□□□□□ -0.14
TMEM116-203ENST00000546537 DACT2Q5SW24 774 aa14.16□□□□□ -0.14
TMEM116-203ENST00000546537 NBPF11Q86T75 865 aa14.16□□□□□ -0.14
TMEM116-203ENST00000546537 APOBEC3FQ8IUX4 373 aaKnown RBP14.16□□□□□ -0.14
TMEM116-203ENST00000546537 WNK4Q96J92 1243 aa14.16□□□□□ -0.14
TMEM116-203ENST00000546537 BABAM1Q9NWV8 329 aa14.16□□□□□ -0.14
TMEM116-203ENST00000546537 COL1A1P02452 1464 aaPredicted RBP14.16□□□□□ -0.14
TMEM116-203ENST00000546537 XDHP47989 1333 aa14.15□□□□□ -0.14
TMEM116-203ENST00000546537 MYO3BQ8WXR4 1341 aa14.15□□□□□ -0.14
TMEM116-203ENST00000546537 ECM29Q5VYK3 1845 aa14.15□□□□□ -0.14
TMEM116-203ENST00000546537 RANBP2P49792 3224 aaKnown RBP14.15□□□□□ -0.14
TMEM116-203ENST00000546537 COL6A3P12111 3177 aa14.15□□□□□ -0.14
TMEM116-203ENST00000546537 SASH1O94885 1247 aa14.15□□□□□ -0.14
TMEM116-203ENST00000546537 MMP14P50281 582 aa14.15□□□□□ -0.14
TMEM116-203ENST00000546537 SLC9C1Q4G0N8 1177 aa14.15□□□□□ -0.14
TMEM116-203ENST00000546537 OTUD7BQ6GQQ9 843 aa14.15□□□□□ -0.14
TMEM116-203ENST00000546537 ANKRD13DQ6ZTN6 518 aa14.15□□□□□ -0.14
TMEM116-203ENST00000546537 MXD3Q9BW11 206 aa14.15□□□□□ -0.14
TMEM116-203ENST00000546537 UNCXA6NJT0 531 aa14.14□□□□□ -0.15
TMEM116-203ENST00000546537 ATP2B4P23634 1241 aa14.14□□□□□ -0.15
TMEM116-203ENST00000546537 TRIM28Q13263 835 aaKnown RBP14.14□□□□□ -0.15
TMEM116-203ENST00000546537 SLC4A8Q2Y0W8 1093 aa14.14□□□□□ -0.15
TMEM116-203ENST00000546537 CLMNQ96JQ2 1002 aa14.14□□□□□ -0.15
TMEM116-203ENST00000546537 SSC5DA1L4H1 1573 aa14.13□□□□□ -0.15
TMEM116-203ENST00000546537 MED23Q9ULK4 1368 aa14.13□□□□□ -0.15
TMEM116-203ENST00000546537 STRIP1Q5VSL9 837 aa14.13□□□□□ -0.15
TMEM116-203ENST00000546537 PTPN18Q99952 460 aa14.13□□□□□ -0.15
TMEM116-203ENST00000546537 CHPF2Q9P2E5 772 aa14.13□□□□□ -0.15
TMEM116-203ENST00000546537 PTCH2Q9Y6C5 1203 aa14.13□□□□□ -0.15
TMEM116-203ENST00000546537 TESPA1A2RU30 521 aaPredicted RBP14.12□□□□□ -0.15
TMEM116-203ENST00000546537 TRIM26Q12899 539 aaPredicted RBP14.12□□□□□ -0.15
TMEM116-203ENST00000546537 ZBTB38Q8NAP3 1195 aaPredicted RBP14.12□□□□□ -0.15
TMEM116-203ENST00000546537 ZBED3Q96IU2 234 aaPredicted RBP14.12□□□□□ -0.15
TMEM116-203ENST00000546537 DEFB129Q9H1M3 183 aa14.12□□□□□ -0.15
TMEM116-203ENST00000546537 PRO3102Q9H379 93 aa14.12□□□□□ -0.15
TMEM116-203ENST00000546537 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.12□□□□□ -0.15
TMEM116-203ENST00000546537 SPEF2Q9C093 1822 aa14.11□□□□□ -0.15
TMEM116-203ENST00000546537 WTIPA6NIX2 430 aaPredicted RBP14.11□□□□□ -0.15
TMEM116-203ENST00000546537 PPP1R12BO60237 982 aaPredicted RBP14.11□□□□□ -0.15
TMEM116-203ENST00000546537 HSP90B1P14625 803 aaKnown RBP14.11□□□□□ -0.15
TMEM116-203ENST00000546537 GJA5P36382 358 aa14.11□□□□□ -0.15
TMEM116-203ENST00000546537 ARHGEF6Q15052 776 aa14.11□□□□□ -0.15
TMEM116-203ENST00000546537 CCDC152Q4G0S7 254 aa14.11□□□□□ -0.15
TMEM116-203ENST00000546537 MAPK8IP3Q9UPT6 1336 aa14.11□□□□□ -0.15
TMEM116-203ENST00000546537 OTOFQ9HC10 1997 aa14.11□□□□□ -0.15
TMEM116-203ENST00000546537 A0A0C4DFX4 3053 aa14.1□□□□□ -0.15
TMEM116-203ENST00000546537 MNX1P50219 401 aaPredicted RBP14.1□□□□□ -0.15
TMEM116-203ENST00000546537 ANKRD18AQ8IVF6 992 aa14.1□□□□□ -0.15
TMEM116-203ENST00000546537 FBXW7Q969H0 707 aa14.1□□□□□ -0.15
TMEM116-203ENST00000546537 PCGF6Q9BYE7 350 aa14.1□□□□□ -0.15
TMEM116-203ENST00000546537 ZSWIM8A7E2V4 1837 aa14.1□□□□□ -0.15
TMEM116-203ENST00000546537 PDE8AO60658 829 aa14.09□□□□□ -0.15
TMEM116-203ENST00000546537 MYCP01106 439 aaPredicted RBP14.09□□□□□ -0.15
TMEM116-203ENST00000546537 KRT24Q2M2I5 525 aa14.09□□□□□ -0.15
TMEM116-203ENST00000546537 KIAA0825Q8IV33 1275 aa14.09□□□□□ -0.15
TMEM116-203ENST00000546537 DPF3Q92784 378 aa14.09□□□□□ -0.15
TMEM116-203ENST00000546537 COA1Q9GZY4 146 aa14.09□□□□□ -0.15
TMEM116-203ENST00000546537 PNNQ9H307 717 aaKnown RBP14.09□□□□□ -0.15
TMEM116-203ENST00000546537 PPP2R3BQ9Y5P8 575 aa14.09□□□□□ -0.15
TMEM116-203ENST00000546537 CUL9Q8IWT3 2517 aa14.08□□□□□ -0.15
TMEM116-203ENST00000546537 SH3TC2Q8TF17 1288 aa14.08□□□□□ -0.16
TMEM116-203ENST00000546537 USP2O75604 605 aaPredicted RBP14.07□□□□□ -0.16
TMEM116-203ENST00000546537 RIPK4P57078 832 aa14.07□□□□□ -0.16
TMEM116-203ENST00000546537 SUPT20HL1Q3ZLR7 823 aa14.07□□□□□ -0.16
TMEM116-203ENST00000546537 HDGFL1Q5TGJ6 251 aa14.07□□□□□ -0.16
TMEM116-203ENST00000546537 TTLL5Q6EMB2 1281 aa14.07□□□□□ -0.16
TMEM116-203ENST00000546537 ANKRD13AQ8IZ07 590 aa14.07□□□□□ -0.16
TMEM116-203ENST00000546537 SHISA4Q96DD7 197 aa14.07□□□□□ -0.16
TMEM116-203ENST00000546537 MS4A4AQ96JQ5 239 aa14.07□□□□□ -0.16
TMEM116-203ENST00000546537 CCDC85AQ96PX6 553 aaPredicted RBP14.07□□□□□ -0.16
TMEM116-203ENST00000546537 DBF4Q9UBU7 674 aaPredicted RBP14.07□□□□□ -0.16
TMEM116-203ENST00000546537 MYH3P11055 1940 aa14.07□□□□□ -0.16
TMEM116-203ENST00000546537 A0A1W2PPC1 479 aa14.06□□□□□ -0.16
TMEM116-203ENST00000546537 PCCAP05165 728 aaPredicted RBP14.06□□□□□ -0.16
TMEM116-203ENST00000546537 IREB2P48200 963 aaKnown RBP14.06□□□□□ -0.16
TMEM116-203ENST00000546537 CCT4P50991 539 aaKnown RBP14.06□□□□□ -0.16
TMEM116-203ENST00000546537 TXNRD3Q86VQ6 643 aa14.06□□□□□ -0.16
TMEM116-203ENST00000546537 MTMR14Q8NCE2 650 aa14.06□□□□□ -0.16
TMEM116-203ENST00000546537 ZFYVE28Q9HCC9 887 aa14.06□□□□□ -0.16
TMEM116-203ENST00000546537 HYPKQ9NX55 129 aa14.06□□□□□ -0.16
TMEM116-203ENST00000546537 MINPP1Q9UNW1 487 aa14.06□□□□□ -0.16
TMEM116-203ENST00000546537 ZNF804BA4D1E1 1349 aa14.06□□□□□ -0.16
TMEM116-203ENST00000546537 HOXB7P09629 217 aa14.05□□□□□ -0.16
TMEM116-203ENST00000546537 DLGAP5Q15398 846 aa14.05□□□□□ -0.16
TMEM116-203ENST00000546537 TAF1CQ15572 869 aaPredicted RBP14.05□□□□□ -0.16
TMEM116-203ENST00000546537 NBPF12Q5TAG4 269 aaPredicted RBP14.05□□□□□ -0.16
TMEM116-203ENST00000546537 OPTNQ96CV9 577 aa14.05□□□□□ -0.16
TMEM116-203ENST00000546537 CDC5LQ99459 802 aaKnown RBP14.05□□□□□ -0.16
TMEM116-203ENST00000546537 BSDC1Q9NW68 430 aaPredicted RBP14.05□□□□□ -0.16
TMEM116-203ENST00000546537 LAMA3Q16787 3333 aa14.04□□□□□ -0.16
TMEM116-203ENST00000546537 CHL1O00533 1208 aa14.04□□□□□ -0.16
TMEM116-203ENST00000546537 SOX1O00570 391 aaPredicted RBP14.04□□□□□ -0.16
TMEM116-203ENST00000546537 RIC3Q7Z5B4 369 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms